Gcaud2313.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2313.t1
Unique NameGcaud2313.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length293
Homology
BLAST of Gcaud2313.t1 vs. uniprot
Match: A0A2V3IUG1_9FLOR (Surfeit locus protein 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUG1_9FLOR)

HSP 1 Score: 466 bits (1200), Expect = 2.840e-164
Identity = 242/292 (82.88%), Postives = 272/292 (93.15%), Query Frame = 0
Query:    1 MEPSITTSVDYTSIPKVVRQNLSTLRKFRKTVAPYLPLICRVLLVSTFIEDGIRVLFEMPHQIMFLRHEYYLPSFIAAIMLLSNIAISFIAIAVILAGKRVARGMYENLAAYALIACVVYQQVLYGRHSPIGSGNVGFFIRNICLSGSLLLITCQSRLAQGRSALPLGLLDGQTDKQTTVSYLQLASRIMLVLLGLEFLTTLGVIGTLFALPVIFAVLLGFKLEISGLVLFFFYLVHNILNSAFWSVKGTYVSQIMQYEFFQTLSIMGGLLLLIITGPGAISIDEMRSRKAF 292
            M+ S+  +VD +S+PKVVRQNLSTLRKFRK V+PYLPL CR+LL+STF+EDGIRVLFE+ HQ+ FL HEYY+PSFIAA MLL+NI ISFIAIA+ILAGKR ARGMYENLAAYALI CVVYQQVLYGRHSPIGSGNVGF +RN+CLSGSLLLITCQSR+AQGRSALPLGLLDGQ DKQTTV+YLQLASRIMLVLLGLEF+TTLGV+GT+ A+PVI AVL+G++LEISG+VLF FYLVHNI+NSAFWSVKG Y+SQIMQYEFFQTLSIMGGLLLLI+ GPGAIS+DEMRSRKAF
Sbjct:    1 MDSSMNNTVDVSSLPKVVRQNLSTLRKFRKQVSPYLPLACRILLISTFLEDGIRVLFELNHQVDFLHHEYYIPSFIAAFMLLTNIIISFIAIAIILAGKRFARGMYENLAAYALIGCVVYQQVLYGRHSPIGSGNVGFLVRNLCLSGSLLLITCQSRIAQGRSALPLGLLDGQADKQTTVAYLQLASRIMLVLLGLEFITTLGVLGTMMAIPVIVAVLIGYRLEISGIVLFGFYLVHNIINSAFWSVKGAYISQIMQYEFFQTLSIMGGLLLLIMIGPGAISVDEMRSRKAF 292          
BLAST of Gcaud2313.t1 vs. uniprot
Match: R7QIV9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIV9_CHOCR)

HSP 1 Score: 392 bits (1008), Expect = 4.120e-135
Identity = 199/284 (70.07%), Postives = 240/284 (84.51%), Query Frame = 0
Query:    9 VDYTSIPKVVRQNLSTLRKFRKTVAPYLPLICRVLLVSTFIEDGIRVLFEMPHQIMFLRHEYYLPSFIAAIMLLSNIAISFIAIAVILAGKRVARGMYENLAAYALIACVVYQQVLYGRHSPIGSGNVGFFIRNICLSGSLLLITCQSRLAQGRSALPLGLLDGQTDKQTTVSYLQLASRIMLVLLGLEFLTTLGVIGTLFALPVIFAVLLGFKLEISGLVLFFFYLVHNILNSAFWSVKGTYVSQIMQYEFFQTLSIMGGLLLLIITGPGAISIDEMRSRKAF 292
            ++ +++P   R  ++T+R+ RK  APYLP ICRVLLVSTF+EDG+R+LFEM HQ+ FL HEY LP FIA  MLL NI +SF+A+  IL  K++ARG YEN AAYALIAC+ YQQ+LYGRHSPIGSGNVGF +RN+CLSGSLLLITCQ+R+A GRSALP+GLLDGQTDK+TTVSYLQLASRI+LVLL +EF  T+G +GT+  LPVI AVL+G++LEISG +L   YL HNI+ SAFWSV G+YVSQIMQYEFFQT+SIMGGLLLLI+TGPG  S+DE+RSRKAF
Sbjct:    5 MNISNLPPAARNAIATVRRVRKLSAPYLPTICRVLLVSTFVEDGVRILFEMRHQVDFLTHEYMLPGFIATFMLLINIVVSFLAVVFILGRKKIARGAYENYAAYALIACIAYQQILYGRHSPIGSGNVGFLVRNLCLSGSLLLITCQTRMASGRSALPMGLLDGQTDKKTTVSYLQLASRILLVLLAIEFSFTMGTVGTVLTLPVILAVLVGYQLEISGGILLILYLAHNIIQSAFWSVSGSYVSQIMQYEFFQTVSIMGGLLLLILTGPGEFSVDELRSRKAF 288          
BLAST of Gcaud2313.t1 vs. uniprot
Match: A0A1X6NZ28_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZ28_PORUM)

HSP 1 Score: 272 bits (696), Expect = 7.310e-88
Identity = 141/279 (50.54%), Postives = 201/279 (72.04%), Query Frame = 0
Query:   14 IPKVVRQNLSTLRKFRKTVAPYLPLICRVLLVSTFIEDGIRVLFEMPHQIMFLRHEYYLPSFIAAIMLLSNIAISFIAIAVILAGKRVARGMYENLAAYALIACVVYQQVLYGRHSPIGSGNVGFFIRNICLSGSLLLITCQSRLAQGRSALPLGLLDGQTDKQTTVSYLQLASRIMLVLLGLEFLTTLGVIGTLFALPVIFAVLLGFKLEISGLVLFFFYLVHNILNSAFWSVKGTYVSQIMQYEFFQTLSIMGGLLLLIITGPGAISIDEMRSRKAF 292
            +  + RQ   T ++  K +APY P I R L V+TF+EDG+RVL EMPHQI FL +EY LP ++A  +L+  + +SF+   +++A K   +G YE + AY L+ CV YQQ++YGRHSPIGSGN+GF +RN+CL+G+LLL   QSR+ +GR+ALP G+ D   +  T  SYL+LASR++LVLL +EFLTT+G +G +   PV+ AV +G+ + +SG  L   YLVHN+LNSAFWS+  +Y+  +++YE+ QT+SIMGGLL+L++ GPG +S+DE   RK F
Sbjct:    4 VQDIARQVQRTYKRVTKQLAPYAPYITRGLFVATFVEDGVRVLTEMPHQIDFLHYEYKLPEWLAGFLLIVTVLLSFVGSGLLIAQKHAFKGKYEAVGAYLLLGCVTYQQLVYGRHSPIGSGNLGFLVRNLCLAGALLLFLAQSRIDEGRTALP-GVPD-PGNSVTMQSYLKLASRVLLVLLAMEFLTTMGWVGCVLTAPVVVAVAVGWYMTLSGTALLVLYLVHNVLNSAFWSLGDSYMKDVLRYEWVQTISIMGGLLMLVVNGPGELSVDERFRRKRF 280          
BLAST of Gcaud2313.t1 vs. uniprot
Match: A0A7S0XID0_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XID0_9RHOD)

HSP 1 Score: 255 bits (652), Expect = 3.780e-81
Identity = 142/283 (50.18%), Postives = 200/283 (70.67%), Query Frame = 0
Query:   13 SIPKVVRQNLSTLRKFRKTVAPYLPLICRVLLVSTFIEDGIRVLFEMPHQIMFLRHEYYLPSFIAAIMLLSNIAISFIAIAVILAGKRVARGMYENLAAYALIACVVYQQVLYGRHSPIGSGNVGFFIRNICLSGSLLLITCQSRLAQGRSALPLGLLDGQTDKQTTVSYLQLASRIMLVLLGLEFLTTLGVIGTLFALPVIFAVLLGFKLEISGLVLFFFYLVHNILNSAFWSVK-----GTYVSQIMQYEFFQTLSIMGGLLLLIITGPGAISIDEMRSRK 290
            S+   V++  S ++K +K   PYLPLI RVL+V+TF+EDGIR  +E   Q+ FL+H+Y +P  I  I+++    +S +  A+IL  K       E    YALI+ V+YQQ +YGRHSPIGSGN GF +RN+CL+G+LL++  Q R++QG +ALP G+ D   DK TTV+Y+QLA+R ++VLL LEFL+TLG IGTL  +PV+ AVL G+K +ISG +L   Y +HN++NSAFWSV+     G +  ++ +YEF QT+SIMGGLLLL+ +GPGA+S+DE   R+
Sbjct:    5 SVKNAVKEVNSQVKKAKKIFKPYLPLITRVLIVATFVEDGIRCFYEFGGQVDFLKHQYGIPKAICGILIVITTIMSLLGAALILTQKP----QLEKFGCYALISFVLYQQAMYGRHSPIGSGNFGFLMRNLCLAGTLLMLLVQGRMSQGHTALP-GIPD-PGDKTTTVTYIQLAARALIVLLSLEFLSTLGPIGTLTTIPVLLAVLAGYKSQISGSLLLLIYFLHNVINSAFWSVRTDSYRGEFDREVKRYEFVQTISIMGGLLLLVASGPGALSLDEKFDRR 281          
BLAST of Gcaud2313.t1 vs. uniprot
Match: A0A5J4YLX1_PORPP (Surfeit locus protein 4 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLX1_PORPP)

HSP 1 Score: 237 bits (605), Expect = 5.240e-74
Identity = 135/283 (47.70%), Postives = 192/283 (67.84%), Query Frame = 0
Query:   13 SIPKVVRQNLSTLRKFRKTVAPYLPLICRVLLVSTFIEDGIRVLFEMPHQIMFLRHEYYLPSFIAAIMLLSNIAISFIAIAVILAGKRVARGMYENLAAYALIACVVYQQVLYGRHSPIGSGNVGFFIRNICLSGSLLLITCQSRLAQGRSALPLGLLDGQTDKQTTVSYLQLASRIMLVLLGLEFLTTLGVIGTLFALPVIFAVLLGFKLEISGLVLFFFYLVHNILNSAFWSVKG-----TYVSQIMQYEFFQTLSIMGGLLLLIITGPGAISIDEMRSRK 290
            ++ K V+Q    +++ RK   PYLP+I RVL+++TF+EDGIRVL ++  Q  FL ++Y LP  ++ +++ S   +S  A A I + K       E    YA +  V YQQVLYGRHSPIGSGN GF +RN+CL+G+LL++  Q+RL++G +ALP G+ D   DK TT++Y+QL +R +LVLL LEFL+  G   TL  +PV+ AVLLGF+ +ISG VL   Y +HN+ NSAFW++K      ++  ++ +YEF QTLSIMGGL+LLI TGPG +S+D    R+
Sbjct:    8 AVKKRVKQVNDYVKRVRKVTKPYLPMITRVLIIATFVEDGIRVLLDIKPQANFLTYQYSLPFALSVMLIASTTLVSLAASAAICSRKP----KLELYGCYAQLGYVFYQQVLYGRHSPIGSGNFGFLMRNLCLAGTLLMLIVQNRLSEGHTALP-GIPD-PGDKSTTMTYIQLGARALLVLLSLEFLSNAGAFATLVTIPVLLAVLLGFQTQISGTVLLIMYFLHNVSNSAFWAIKSDSQRNSFDREVKRYEFVQTLSIMGGLMLLISTGPGQLSVDSKMGRQ 284          
BLAST of Gcaud2313.t1 vs. uniprot
Match: A0A7S0BUB9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BUB9_9RHOD)

HSP 1 Score: 201 bits (512), Expect = 3.830e-60
Identity = 116/260 (44.62%), Postives = 166/260 (63.85%), Query Frame = 0
Query:   25 LRKFRKTVAPYLPLICRVLLVSTFIEDGIRVLFEMPHQIMFLRHEYYLPSFIAAIMLLSNIAISFIAIAVILAGKRVARGMYENLAAYALIACVVYQQVLYGRHSPIGSGNVGFFIRNICLSGSLLLITCQSRLAQGRSALPLGLLDGQTDKQTTVSYLQLASRIMLVLLGLEFLTTLGVIGTLFALPVIFAVLLGFKLEISGLVLFFFYLVHNILNSAFWSVKG-----TYVSQIMQYEFFQTLSIMGGLLLLIITGPG 279
            L K +K V+PY P++ R LLV TF EDG+RVL E   Q+ FL   Y +P+++A  +L+  + +S I   +++  K      YE   +Y L+  ++YQQ++YG  SP+ SG VGF  RN+ L+G+  L+    RL +GRS LP GL D   D+ T  +Y QLASRI++VLL +EF+   G    +  +PVI  VL+G+K+  +G+ L   Y +HN+LNSAFWSV G      Y  +I++YEF QTLSIMGGL+LL+ +GPG
Sbjct:   24 LTKIKKVVSPYFPIMARFLLVLTFFEDGMRVLLEFASQVYFLNSHYGMPNWLAGFILIVTVLLSLIGAGLVMTKK------YEVYGSYVLLGFLLYQQIMYGHISPVNSGGVGFLFRNLSLAGAFFLLIALKRLGEGRSVLP-GLPDAG-DRATLFTYFQLASRILMVLLAVEFIPAWGGFWFVITIPVILCVLVGYKMPYTGIALICVYFLHNVLNSAFWSVGGGSLEDEYQREILKYEFVQTLSIMGGLMLLVSSGPG 275          
BLAST of Gcaud2313.t1 vs. uniprot
Match: A0A7J7IDB8_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDB8_9RHOD)

HSP 1 Score: 195 bits (496), Expect = 1.130e-56
Identity = 119/277 (42.96%), Postives = 168/277 (60.65%), Query Frame = 0
Query:   41 RVLLVSTFIEDGIRVLFEMPHQIMFLRHEYYLPSFIAAIMLLSNIAISFIAIAVILA-------GKRVARGM----YENLAAYALIACVVYQQVLYGRHSPIGSGNVGFFIRNICLSGSLLLITCQSRLAQGRSALPLGLLDG--------------QTDKQTTVSYLQLASRIMLVLLGLEFLTTLGVIGTLFALPVIFAVLLGFKLEISGLVLFFFYLVHNILNSAFWSVK-----GTYVSQIMQYEFFQTLSIMGGLLLLIITGPGAISIDEMR 287
            RVLLV+TF+ED +RV+ ++  Q  FLRH Y +P +   + L   + +S  A   I+A       GK + R       +  A+Y LI  ++ QQ LYGR +P   GNV F +RN+CL+GS L++   +R+ +G SALP GLL G                  Q    Y+QLA+RIMLVLL ++FL++LG +GTL A+PV+ AVL+G++  +SG +L  FY VHN+L SAFW V+     G Y   + QYEF QT+SIM G+L+L+  GPGA+SID  +
Sbjct:   85 RVLLVATFLEDALRVISDLAGQARFLRHFYGVPVWAGTLFLFGIVGLSVSASLAIIASGQARSSGKAIQRDRALLSLQERASYLLIGHILVQQALYGRDAPATGGNVSFLVRNMCLAGSFLMVAANARIKKGLSALPGGLLGGINRANSGGVSGGQASLSSQKVFEYMQLAARIMLVLLPIDFLSSLGFMGTLLAVPVMIAVLVGYRTRVSGSILIAFYAVHNLLMSAFWRVRDHSPYGQYARDVKQYEFVQTISIMAGVLMLVFEGPGALSIDHQQ 361          
BLAST of Gcaud2313.t1 vs. uniprot
Match: M2XSM8_GALSU (COPII-coated vesicle protein SurF4/Erv29, putative n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XSM8_GALSU)

HSP 1 Score: 183 bits (464), Expect = 6.660e-53
Identity = 115/267 (43.07%), Postives = 168/267 (62.92%), Query Frame = 0
Query:   29 RKTVAPYLPLICRVLLVSTFIEDGIRVLFEMPHQIMFLRHEYYLPSFIAAIMLLSNIAISFIAIAVILAGKRVARGMYENLAAYALIACVVYQQVLYGRHSPIGSGNVGFFIRNICLSGSLLLITCQSRLAQGRSALPLGLLDGQTDKQTTV---SYLQLASRIMLVLLGLEFLTTLGVIGTLFALPVIFAVLLGFKLEISGLVLFFFYLVHNILNSAFWSVKGTYVSQIMQ-----YEFFQTLSIMGGLLLLIITGPGAISIDEMR 287
            +++V   LPLI R+LL++TFIED IR + +   QI FL++ Y+LP  ++A+ L S I+ + +A         +    +E+ AA  L+A V  QQ+LYG+++P   G  GF +RN+CL GSLL+I   SR+ +G + LP G   G+    TT     Y+QLASR ++ LL LEF+ ++G IGTL +LPV+  V +GFK ++  L+L   Y +HN+L SAFW  +G     ++Q     +EF QTLSIMGGL LL  +GPGA+S DE +
Sbjct:   21 KRSVKKALPLITRLLLIATFIEDSIRGIVQRELQIQFLQYRYHLPFLVSAVFLYSWISTATVA------SFSILLRWHEDRAALVLVAYVTLQQLLYGKYAPSTHGKWGFLVRNLCLCGSLLIIVASSRMKKGYTLLP-GF--GKPKNGTTSRFPEYIQLASRCLMALLSLEFVASMGWIGTLLSLPVVLFVFVGFKTQLCSLLLMLLYAIHNVLQSAFWYFRGNSWEAMVQRDVKLFEFVQTLSIMGGLGLLSSSGPGALSFDERK 278          
BLAST of Gcaud2313.t1 vs. uniprot
Match: A0A7S2ZJD9_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZJD9_9RHOD)

HSP 1 Score: 174 bits (441), Expect = 5.020e-50
Identity = 97/217 (44.70%), Postives = 143/217 (65.90%), Query Frame = 0
Query:   27 KFRKTVAPYLPLICRVLLVSTFIEDGIRVLFEMPHQIMFLRHEYYLPSFIAAIMLLSNIAISFIAIAVILAGKRVARGMYENLAAYALIACVVYQQVLYGRHSPIGSGNVGFFIRNICLSGSLLLITCQSRLAQGRSALPLGLLDGQTDKQTTVSYLQLASRIMLVLLGLEFLTTLGVIGTLFALPVIFAVLLGFKLEISGLVLFFFYLVHNILNSA 243
            K +K VAPY P+I R LLV TF+EDGIRV FE+  Q+ FL+  Y +P+++   +L++ + +SF+   +++  K      YE   +Y L+  ++YQQVLYG  SP+ SG VGF  RN+ L+G+  L+    RL +GRSALP GL D   D+ T  +Y QLASRI++VLL +EF+   G    +  +PV+ +VL+G+K+  +G+VL F Y +HN+LNSA
Sbjct:   26 KLKKVVAPYFPMIARFLLVLTFLEDGIRVFFELDAQVYFLKSHYGMPTWLGGFILIATVLLSFVGAGLVMTKK------YEVYGSYVLLGFLLYQQVLYGHVSPVNSGRVGFLFRNLSLAGAFFLLIALKRLGEGRSALP-GLPD-PGDRATLFTYFQLASRILMVLLAVEFIPAWGGFWFVITIPVLLSVLVGYKMPHTGIVLIFIYFLHNVLNSA 234          
BLAST of Gcaud2313.t1 vs. uniprot
Match: A0A2V3IDN4_9FLOR (Surfeit locus protein 4-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDN4_9FLOR)

HSP 1 Score: 164 bits (415), Expect = 1.870e-45
Identity = 102/283 (36.04%), Postives = 163/283 (57.60%), Query Frame = 0
Query:   17 VVRQNLSTLRKFRKTVAPYLPLICRVLLVSTFIEDGIRVLFEMPHQIMFLRHEYYLPSFIAAIMLLSNIAISFIAIAVILAGKRVARGMYENLAAYALIACVVYQQVLYGRHSPIGSGNVGFFIRNICLSGSLLLITCQSRLAQGRSALPLGLLDGQTDKQTTVSYLQLASRIMLVLLGLEFLTTLGVIGTLFALPVIFAVLLGFKLEISGLVLFFFYLVHNILNSAFWSVKGT------YVSQIMQYEFFQTLSIMGGLLLLIITGPGAISIDE-MRSRKAF 292
            VV+Q    L + ++   PY P + R LLV  F+ED I  L E   Q+ F   E ++P ++A +++L++ + + +   ++   K       E   A  L+   VYQQ++YGRHSPI SGN+GF IRN+CL G+LLL+    R+  G  ALP GL +   DK      + L +RI++ LL +E    +G   +    P+  AV++G+K ++ G +L  FY++  + +  FW +  +      +   +M++EF QT+SI+ GLL+LI TGPGA+S+D+ MR  KA+
Sbjct:   16 VVQQVSHALNRVKRATKPYTPFMTRALLVLAFVEDAIHTLVEYKSQLHFFERELWIPRYVALMLILTSTSATLVGSVMVFFNKL------EKNGAKLLLFATVYQQLIYGRHSPITSGNLGFLIRNLCLCGTLLLVMSAQRVRDGLPALP-GLPE-MRDKHAQRHNVALLTRILMALLSVEMFDVIGWGWSFIMCPIALAVVVGYKTDMMGALLMSFYVLATVSSKQFWRIDASAHVYMAFKRDVMRFEFLQTVSILSGLLVLITTGPGALSLDDSMRRSKAW 290          
The following BLAST results are available for this feature:
BLAST of Gcaud2313.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUG1_9FLOR2.840e-16482.88Surfeit locus protein 4 n=1 Tax=Gracilariopsis cho... [more]
R7QIV9_CHOCR4.120e-13570.07Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NZ28_PORUM7.310e-8850.54Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0XID0_9RHOD3.780e-8150.18Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4YLX1_PORPP5.240e-7447.70Surfeit locus protein 4 n=1 Tax=Porphyridium purpu... [more]
A0A7S0BUB9_9RHOD3.830e-6044.62Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7J7IDB8_9RHOD1.130e-5642.96Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M2XSM8_GALSU6.660e-5343.07COPII-coated vesicle protein SurF4/Erv29, putative... [more]
A0A7S2ZJD9_9RHOD5.020e-5044.70Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A2V3IDN4_9FLOR1.870e-4536.04Surfeit locus protein 4-like n=1 Tax=Gracilariopsi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002995Surfeit locus 4PFAMPF02077SURF4coord: 27..287
e-value: 4.7E-47
score: 160.8
IPR045214Surfeit locus 1/4PANTHERPTHR23427SURFEIT LOCUS PROTEINcoord: 22..287
NoneNo IPR availablePANTHERPTHR23427:SF1SURFEIT LOCUS PROTEIN 4coord: 22..287
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..126
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 51..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..50
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 159..178
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 260..283
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 138..158
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 222..227
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 249..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 284..292
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 228..248
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 127..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 202..221
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 179..196
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 197..201
NoneNo IPR availableTMHMMTMhelixcoord: 199..221
NoneNo IPR availableTMHMMTMhelixcoord: 108..125
NoneNo IPR availableTMHMMTMhelixcoord: 260..282
NoneNo IPR availableTMHMMTMhelixcoord: 228..245
NoneNo IPR availableTMHMMTMhelixcoord: 74..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_845_length_17097_cov_4.330472contigNODE_845_length_17097_cov_4.330472:3970..4926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2313.t1Gcaud2313.t1Gracilaria caudata M_176_S67 malemRNANODE_845_length_17097_cov_4.330472 3970..4926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2313.t1 ID=Gcaud2313.t1|Name=Gcaud2313.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=293bp
MEPSITTSVDYTSIPKVVRQNLSTLRKFRKTVAPYLPLICRVLLVSTFIE
DGIRVLFEMPHQIMFLRHEYYLPSFIAAIMLLSNIAISFIAIAVILAGKR
VARGMYENLAAYALIACVVYQQVLYGRHSPIGSGNVGFFIRNICLSGSLL
LITCQSRLAQGRSALPLGLLDGQTDKQTTVSYLQLASRIMLVLLGLEFLT
TLGVIGTLFALPVIFAVLLGFKLEISGLVLFFFYLVHNILNSAFWSVKGT
YVSQIMQYEFFQTLSIMGGLLLLIITGPGAISIDEMRSRKAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002995Surf4
IPR045214Surf1/Surf4