Gcaud2312.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2312.t2
Unique NameGcaud2312.t2
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length476
Homology
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BLAST of Gcaud2312.t2 vs. uniprot
Match: A0A2V3IUF9_9FLOR (Dynein alpha chain, flagellar outer arm n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUF9_9FLOR)

HSP 1 Score: 513 bits (1321), Expect = 5.040e-176
Identity = 275/496 (55.44%), Postives = 346/496 (69.76%), Query Frame = 0 
Query:    1 MYALHVERREWKQISYGPGPKPHPRLLHTAVAISSTLMVVIGGDTWDSSDSIEAKAAPTTALNDIWVFDYSDKSWMEIKNTGSTELPFLSCSSAVFGRAKGQVPGVYIFGGYSRDKTNYNVVYRLRISDWKLEVLAHVEKDADGNKKLIDSDGDDYHLQGDDEYGKRVI--PRDRESHGAIWLPGVGMLVVGGDGGVSILGDCWLFCQHPDDPQSWRWKELRLVPAGNRPGNKLPRLAGHSLLALPTNTLKVMVWGGILNTGQEVMASNVSYVIDLDKANIAQTIRVSNTGRAPKTGRILHGFVRSRDMLFAFGGCDSEGNIQIGTQYGRLLPNFKAPNQAASFFGEEAMAMAMRGTHPEKSCVDNK-----------RPAQGEANRES--STGAARTPLTGEVLEVMDMGLLVSITIEGKPFKGVLVANEEGDDAVMIDVSDDKQKANGQKSKMRDR-PSKRPKLDAAAEALPDSPPKVRPK-----QTETIHLE 475
            M+ LHVERR+W  ++Y  GPKP PRLLHTAVAISS ++++IGG+TW++  +   + +PT A+NDIWVFDY D SW EI  +    LP LSC SAVFGRAKGQVPGVYIFGG+ R + N +VVY+LR SDWKLE +  V      +KK  D+    ++  G     +++   PR+RESHGAIWLPG GMLVVGGDGG SILGDCWLF Q   DPQ+WRWKE+ L P G +  N+LP LAGHSL+ALPT+T++V+VWGGILN+GQEVM S  SYVIDLD+ + A T RV N G+ P TGRILHGF R+ D+LFA GGCD++GN+  GTQYGRLLP  KA  QAA FFG +A+  A+ G    K+ V+N            +  Q +AN+++  + G +R P  G+VLEV DMGLLVSI I+GKPFKGVLV N         + ++DK + +GQKSK  +  P K+PKLD AAEALPDSP ++RPK     + E I LE
Sbjct:   47 MFVLHVERRQWHNVTYASGPKPSPRLLHTAVAISSHMLIIIGGETWETGGT---EVSPTIAMNDIWVFDYYDSSWREIGRSDFERLPVLSCLSAVFGRAKGQVPGVYIFGGFGRSERNGSVVYKLRTSDWKLETIRVVN-----SKKRKDT----HNSIGRSPNPEKITWHPRERESHGAIWLPGYGMLVVGGDGGSSILGDCWLFFQDEKDPQTWRWKEIHLKPVGGQTENRLPPLAGHSLVALPTSTVQVLVWGGILNSGQEVMDSEFSYVIDLDRLDRAHTRRVKNVGKTPATGRILHGFARANDLLFAVGGCDADGNVLPGTQYGRLLPKLKASVQAARFFGPKALRTAV-GETDVKTDVNNAVQNTGTEDSAAKKVQAKANKDADGTNGRSRGPFPGKVLEVTDMGLLVSIVIDGKPFKGVLVKNPTNGKREKKEGAEDKMQIDGQKSKPLEAVPRKKPKLDPAAEALPDSP-EIRPKPKPISREEVIQLE 528
The following BLAST results are available for this feature:
BLAST of Gcaud2312.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUF9_9FLOR5.040e-17655.44Dynein alpha chain, flagellar outer arm n=1 Tax=Gr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13418Kelch_4coord: 24..78
e-value: 6.0E-7
score: 29.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..383
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..453
NoneNo IPR availablePANTHERPTHR23244KELCH REPEAT DOMAINcoord: 2..77
coord: 65..333
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 153..344
e-value: 1.2E-11
score: 46.2
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 1..152
e-value: 1.1E-16
score: 63.1
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 2..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_845_length_17097_cov_4.330472contigNODE_845_length_17097_cov_4.330472:2257..3684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2312.t2Gcaud2312.t2Gracilaria caudata M_176_S67 malemRNANODE_845_length_17097_cov_4.330472 2257..3684 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2312.t2 ID=Gcaud2312.t2|Name=Gcaud2312.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=476bp
MYALHVERREWKQISYGPGPKPHPRLLHTAVAISSTLMVVIGGDTWDSSD
SIEAKAAPTTALNDIWVFDYSDKSWMEIKNTGSTELPFLSCSSAVFGRAK
GQVPGVYIFGGYSRDKTNYNVVYRLRISDWKLEVLAHVEKDADGNKKLID
SDGDDYHLQGDDEYGKRVIPRDRESHGAIWLPGVGMLVVGGDGGVSILGD
CWLFCQHPDDPQSWRWKELRLVPAGNRPGNKLPRLAGHSLLALPTNTLKV
MVWGGILNTGQEVMASNVSYVIDLDKANIAQTIRVSNTGRAPKTGRILHG
FVRSRDMLFAFGGCDSEGNIQIGTQYGRLLPNFKAPNQAASFFGEEAMAM
AMRGTHPEKSCVDNKRPAQGEANRESSTGAARTPLTGEVLEVMDMGLLVS
ITIEGKPFKGVLVANEEGDDAVMIDVSDDKQKANGQKSKMRDRPSKRPKL
DAAAEALPDSPPKVRPKQTETIHLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller