Gcaud2308.t1 (polypeptide) Gracilaria caudata M_176_S67 male
|
Overview
Homology
BLAST of Gcaud2308.t1 vs. uniprot
Match: A0A2V3ITA6_9FLOR (General transcription factor IIH subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITA6_9FLOR) HSP 1 Score: 724 bits (1870), Expect = 5.500e-262 Identity = 335/418 (80.14%), Postives = 385/418 (92.11%), Query Frame = 0
Query: 1 MLVDVDKDDEDIKRIREGYAWESSKIRSWEQIEEDPETGRLKSYQIDHQRAKKKIRDDGPSGVRRGIIRFCVIIVDMSQSLRSTDLKPSRADLVIDSVQSFIKEFFDQNPISQLSVIMTRDGKALRLSTFSSNEKHHIEAVQKASRMGPGGNASLQNSLTVAKNNLASVPPYGMKEIIIAYGSLSTCDPGDIHQTIESLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHVIPPPTVNRQVSASLIRMGFPMLERLEQPTLYCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTVDEREPDTLQSNGAPNDAHSERVTELLNNDSVRCTGCKTMLRKEKALRLLCPKCLNVFCIDCDSFIHDSLHHCPGCGNQTIRNQS 418
MLVDVDKD+E+ +RIREGYAWESSKIRSWEQIEEDPETGRLKSYQI+ Q A++KIRDDGPSGVRRG+IRFCV+++DMSQSLR+TDLKPSRADLV+DS+Q F++EFFDQNPISQLSV+ TRDG+ALRLS FSSNEKHHIEA+QKASR+GPGGN SLQN+LTV+ +NLASVPPYGMKEII++YGSLSTCDPGDIH+TI++LVSEKIRCSAIGLGAEL+ILR LTK+ GTYVIARNEEHFR+SW+ HV+PPPT NRQVSASLIRMGFPMLERLEQP LYCNNPNLKGRFGYHCPRCSAW SE+PSECALCGLTLVSSPHLARSYHHLFPVP+F+ + ++ + L+ +G D H +R+TELL+ +S RCTGCKT++RK+ AL LLCPKCLNVFCI+CDSFIHDSLHHCPGCGNQ + N S
Sbjct: 9 MLVDVDKDEEETRRIREGYAWESSKIRSWEQIEEDPETGRLKSYQIEDQIARRKIRDDGPSGVRRGVIRFCVVVIDMSQSLRATDLKPSRADLVVDSIQCFVREFFDQNPISQLSVVTTRDGQALRLSNFSSNEKHHIEAIQKASRLGPGGNPSLQNALTVSNSNLASVPPYGMKEIIVSYGSLSTCDPGDIHKTIDTLVSEKIRCSAIGLGAELHILRVLTKRTNGTYVIARNEEHFRESWSSHVVPPPTTNRQVSASLIRMGFPMLERLEQPALYCNNPNLKGRFGYHCPRCSAWTSELPSECALCGLTLVSSPHLARSYHHLFPVPKFIALKDQSLEDLRLSGLEADKHEQRITELLSVESARCTGCKTLMRKDNALHLLCPKCLNVFCIECDSFIHDSLHHCPGCGNQGVLNHS 426
BLAST of Gcaud2308.t1 vs. uniprot
Match: R7Q7Q8_CHOCR (General transcription factor IIH subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7Q8_CHOCR) HSP 1 Score: 585 bits (1507), Expect = 8.220e-207 Identity = 268/400 (67.00%), Postives = 334/400 (83.50%), Query Frame = 0
Query: 11 DIKRIREGYAWESSKIRSWEQIEEDPETGRLKSYQIDHQRAKKKIRDDGPSGVRRGIIRFCVIIVDMSQSLRSTDLKPSRADLVIDSVQSFIKEFFDQNPISQLSVIMTRDGKALRLSTFSSNEKHHIEAVQKASRMGPGGNASLQNSLTVAKNNLASVPPYGMKEIIIAYGSLSTCDPGDIHQTIESLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHVIPPPTVNRQVSASLIRMGFPMLERLEQPTLYCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTVDEREPDTLQSNGAPNDAHSERVTELLNNDSVRCTGCKTMLRKEKALRLLCPKCLNVFCIDCDSFIHDSLHHCPGCG 410
++KR +E YAWESS +RSW+QIEEDPETG+LKS+ + Q A+K+ RDDG +GVRRGIIRFCV+I+DMS+ +R+TDLKPSRADL +SV SF KE+FDQNPISQLSV+MTRD +A++LS+FSSNEKHHIEA++KA R+GP G ASLQN+L +A NL++VPPY MKE+I+ YGSLSTCDPGDIH TI L S K+RCSA+GLGAEL+ILR LTK GTY IA NEEHFRDS HVIPPPT +QVSASLIRMG+P+L+R+++PTLYCNNP+++GR GY+CPRCS W+SE+P EC LCGLTLVSSPHLARSYHHLFPVP+F++++ + D L+ ++A + +LL D +RCTGC +L KE +LRLLCP C+ VFC+DCD+F+HDSLHHCPGCG
Sbjct: 22 ELKRAKEAYAWESSNVRSWDQIEEDPETGKLKSFVREKQIARKRSRDDGFTGVRRGIIRFCVLIIDMSEHVRATDLKPSRADLFCESVSSFAKEYFDQNPISQLSVVMTRDYEAIKLSSFSSNEKHHIEAMRKALRLGPSGAASLQNALKIANKNLSTVPPYAMKEVIVCYGSLSTCDPGDIHATINLLASSKVRCSAVGLGAELHILRVLTKSTNGTYSIAMNEEHFRDSLGSHVIPPPTTTKQVSASLIRMGYPILQRIDEPTLYCNNPSVRGRLGYNCPRCSGWLSEMPCECTLCGLTLVSSPHLARSYHHLFPVPKFISLETSDLD-LRLQSKEDEAKFAKAMKLLPIDVLRCTGCAKLLEKEASLRLLCPSCVKVFCVDCDAFVHDSLHHCPGCG 420
BLAST of Gcaud2308.t1 vs. uniprot
Match: A0A7S3EFP8_9RHOD (General transcription factor IIH subunit n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EFP8_9RHOD) HSP 1 Score: 342 bits (878), Expect = 1.130e-111 Identity = 185/422 (43.84%), Postives = 255/422 (60.43%), Query Frame = 0
Query: 3 VDVDKDDEDIKRIRE-----GYAWESSKIRSWEQIEEDPETGRLKSYQIDHQRAKKKIRDDGPSGVRRGIIRFCVIIVDMSQSLRSTDLKPSRADLVIDSVQSFIKEFFDQNPISQLSVIMTRDGKALRLSTFSSNEKHHI-EAVQKASRMGPGGNASLQNSLTVAKNNLASVPPYGMKEIIIAYGSLSTCDPGDIHQTIESLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHVIPPPTVNRQVSASLIRMGFPMLERLEQPTLYCN-NPNLKG-----RFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTVDEREPDTLQSNGAPNDAHSERVTELLNNDSVRCTGC-KTMLRKEKALRLLCPKCLNVFCIDCDSFIHDSLHHCPGCGN 411
+D+DKDDE + +E GYAWES RSWE+I+ED E+GR+++ D +++ R G++RGI+R+ V+ +D S+S+ +D+KPSR V+ + F++EFF+QNPI+ L+++ T G A +++ S+ + E A + G ASLQN L ++K L VPPYG KE+I+ + SLST DPGDI T SL IRCS +GL AE+YILR + KK GG Y +A NEEHF + HV PPP + + ASL+ MGFP L+ L+ Y + N N KG + GY CPRC +W+S++P EC LCGLTL++SPHLARSYHHLFP+P F + VT + + RC GC K L + + C C NVFC +CD FIHDSLH+CPGC +
Sbjct: 6 LDIDKDDEFTREEQEAKKKKGYAWESQD-RSWERIQED-ESGRIRAVGADDPATRRQRRQALIPGIKRGIVRYAVLAIDASESMNDSDMKPSRGIAVLTICEQFVQEFFEQNPIAHLAIVATFRGSATQVAAIGSSPQALCSELSTMAEKASFRGEASLQNLLELSKAILDPVPPYGSKEVIMVFSSLSTTDPGDIKATTNSLKENGIRCSIVGLAAEVYILRQVCKKTGGEYHVATNEEHFHELVNAHVPPPPLASDTLKASLVEMGFPKLKVLKSSKQYFDANVNPKGGRSSGKIGYECPRCKSWLSDVPVECVLCGLTLITSPHLARSYHHLFPIPAF----------------------KEVTATDTSGAARCKGCCKRFLSGDSKAQ--CTSCKNVFCEECDIFIHDSLHNCPGCNS 401
BLAST of Gcaud2308.t1 vs. uniprot
Match: A0A1X6P7L4_PORUM (VWFA domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7L4_PORUM) HSP 1 Score: 339 bits (870), Expect = 1.350e-111 Identity = 165/323 (51.08%), Postives = 222/323 (68.73%), Query Frame = 0
Query: 6 DKDDEDIKRIREGYAWESSKIRSWEQIEEDPETGRLKSYQIDHQRAKKKIRDDGPSGVRRGIIRFCVIIVDMSQSLRSTDLKPSRADLVIDSVQSFIKEFFDQNPISQLSVIMTRDGKALRLSTFSSNEKHHIEAVQKASRMGPGGNASLQNSLTVAKNNLASVPPYGMKEIIIAYGSLSTCDPGDIHQTIESLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHVIPPPTVNRQVSASLIRMGFPMLERLEQPTLYCNNPNLKGR-FGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFP 327
D DD ++ GYAWE+ RSWEQI+EDP TGRLKS QRA+K+ RDDG GVRRG+IR+ V++VD+S ++ +TD PSR + V + +FI+ FFD+NPISQL+++ RDG A LST +S+ + H +A+ A G G+ASL+N + +A LA +P YG +E+++ +G L+TCDPGD+ ++ L ++ +R S +G+ AE+YIL L+K+ GG Y +A E HF + GHV PPPTV V +LIRMGFP+L L P C + NL R GY CPRC AWI+ +P+EC LCGLTLVSSPHLARSYHHLFP
Sbjct: 3 DDDDAPVEAASRGYAWEARFERSWEQIQEDPRTGRLKSLAAVTQRARKRRRDDGVRGVRRGMIRYAVLVVDLSAAMAATDWSPSRGEAVASAADTFIRAFFDENPISQLALVALRDGVAELLSTLNSSPRSHCDALATAVAGGCYGDASLENGVRLAAAVLAPIPAYGTREVLVLFGGLATCDPGDVRAAMDGLAADGMRASVVGIDAEVYILSLLSKRTGGMYAVATGEAHFGELLAGHVTPPPTVGDGVPPTLIRMGFPLLRALPAPRP-CFDDNLAARRVGYVCPRCEAWIAHVPAECVLCGLTLVSSPHLARSYHHLFP 324
BLAST of Gcaud2308.t1 vs. uniprot
Match: A0A5J4YXZ9_PORPP (General transcription factor IIH subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXZ9_PORPP) HSP 1 Score: 340 bits (873), Expect = 4.650e-111 Identity = 177/405 (43.70%), Postives = 255/405 (62.96%), Query Frame = 0
Query: 19 YAWESSKIRSWEQIEEDPETGRLKS-----YQIDHQRAKKKIRDDGPSGVRRGIIRFCVIIVDMSQSLRSTDLKPSRADLVIDSVQSFIKEFFDQNPISQLSVIMTRDGKALRLSTFSSNEKHHIEAVQKASRMGPGGNASLQNSLTVAKNNLASVPPYGMKEIIIAYGSLSTCDPGDIHQTIESLVSEKIRCSAIGL-GAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHVIPPPTVNRQVSASLIRMGFPMLERL--EQPTLYCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTVDEREPDTLQSNGAPNDAHSERVTELLNNDSVRCTGC-KTMLRKEKALRLLCPKCLNVFCIDCDSFIHDSLHHCPGCGNQTI 414
YAWE++ RSW++I+EDP+TGRL + Q+ +R + +R+ VRRG++RF V+ +D S+S+ TD++PSRA++V+ + Q F++EF+DQNPISQL +I TR+G A LS SN HI+A+ + +G G ASLQN L L ++P Y +EI++ +GS++TCDPGD+H TI L +KI S + + GAE+Y+L+ + + GG + + NEEH + PP ++ SLIRMGFP+L + + P C N ++ R GY CPRCSAW+S++P EC LCGLTL+SSPHLARSYHHLFPVPRF T +S +A +R C+ C +++ +++ CP+C FCI+CDSFIH+SLH+CPGC N I
Sbjct: 6 YAWEANFERSWDKIQEDPQTGRLSASEGIAQQLARKRRRDSLRETLRGKVRRGMMRFMVLALDFSRSMNLTDMRPSRAEVVVGAAQLFVREFYDQNPISQLIIIATRNGVATVLSPLGSNPVAHIKALSDSLAVGTFGEASLQNLLVQGLAILDALPLYASREILVVFGSIATCDPGDVHATIGELREKKITVSIVCVAGAEVYVLKSASHETGGKHFVPMNEEHLHLHMQMFLQPPQVRADTLAPSLIRMGFPVLRTITSDLPPKKCLNDLIERRVGYECPRCSAWLSDVPIECVLCGLTLLSSPHLARSYHHLFPVPRF---------TEKSVSGAAEADQQRA----------CSACLRSLAAGGESVAAECPRCSEEFCIECDSFIHESLHNCPGCENGGI 391
BLAST of Gcaud2308.t1 vs. uniprot
Match: M2Y5R3_GALSU (General transcription factor IIH subunit n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5R3_GALSU) HSP 1 Score: 335 bits (860), Expect = 4.690e-109 Identity = 171/391 (43.73%), Postives = 238/391 (60.87%), Query Frame = 0
Query: 19 YAWESSKIRSWEQIEEDPETGRLKSYQIDHQRAKKKIRDDGPSGVRRGIIRFCVIIVDMSQSLRSTDLKPSRADLVIDSVQSFIKEFFDQNPISQLSVIMTRDGKALRLSTFSSNEKHHIEAVQKASRMGPGGNASLQNSLTVAKNNLASVPPYGMKEIIIAYGSLSTCDPGDIHQTIESLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHVIPPPTVNRQVSASLIRMGFPMLERLEQPTLYCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTVDEREPDTLQSNGAPNDAHSERVTELLNNDSVRCTGCKTMLRKEKALRLLCPKCLNVFCIDCDSFIHDSLHHCPGC 409
Y+WE +RSWE +EED ETG++K + K+ R + VRRG+IRF V+I+D+S+ + TD+KPSR ++ + Q F+ +F++NPISQL+V++ RDG A +LS+ SN + H E V+ A++ G GN SLQN L VA + L S+P YG +E++I Y S+S+CDPGDI QTIE L E+IRC+ IG+ AELYIL+ L + G+Y + NE H + V+P + +L+RMGFP L+ ++P + N+ L+ + + CPRC EIP EC LCGL LVSS LARSYHHLFPV F ++E + QS+ PN C CK E + +CP C N+FC CD FIHD L++CPGC
Sbjct: 13 YSWEQDIVRSWETLEED-ETGKIKDLSSFERSRVKRKRKNTQQNVRRGLIRFLVLILDLSREAKETDVKPSRGEVCLSCAQKFLYSYFNENPISQLAVVVLRDGVAEKLSSMGSNPRQHSEVVKNANQKGFYGNCSLQNGLDVALSLLHSIPSYGSREVLILYNSISSCDPGDIRQTIEKLEKERIRCNVIGMAAELYILKYLAARTHGSYFVCMNESHLLELLEDFVVPSALIENNTKTALVRMGFPTLKAYKEPKVCLNDKVLRNQV-FVCPRCECCYGEIPIECVLCGLILVSSSQLARSYHHLFPVANFHELEEDKYK--QSHFQPN----------------YCFACKGTFPFEGSEYFVCPNCQNIFCGICDIFIHDGLNNCPGC 383
BLAST of Gcaud2308.t1 vs. uniprot
Match: D7FRP7_ECTSI (General transcription factor IIH subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRP7_ECTSI) HSP 1 Score: 334 bits (856), Expect = 2.940e-108 Identity = 175/404 (43.32%), Postives = 245/404 (60.64%), Query Frame = 0
Query: 18 GYAWESSKIRSWEQIEEDPETGRLKSYQIDHQRAKKKIRDDGPSGVRRGIIRFCVIIVDMSQSLRSTDLKPSRADLVIDSVQSFIKEFFDQNPISQLSVIMTRDGKALRLSTFSSNEKHHIEAVQKASRMGPGGNASLQNSLTVAKNNLASVPPYGMKEIIIAYGSLSTCDPGDIHQTIESLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHVIPPPTVNRQ---VSASLIRMGFPMLERLEQPTL-YCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTVDEREPDTLQSNGAPNDAHSER-------VTELLNNDSVRCTGCKTMLRKEKAL-RLLCPKCLNVFCIDCDSFIHDSLHHCPGC 409
GYAWE R+WE +EED E G +K+ + +R ++ R G ++RG+IR+ + +D+S+++ D++PSR + + VQ F+ +FDQNP+SQL +++TR+G+A +++ S N K H+EA+ K S G ASLQN L +A +L +VP YG +E+++ Y SLSTCDPGDIH+TI L + K+R S +GLGAE+++LR LT++ G Y IA +E H+R+S PPPT + + A L+RMGFP + P+L Y N GY CPRC SE+PSEC +C L LVSSPHLARSYHHLFPVP+F + P TE + S C GC LR L R CP+C + FC+DCD ++HDSLH+CPGC
Sbjct: 14 GYAWEKGFERTWEGVEED-EHGNIKTREEGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDS--DTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGC---LRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGC 411
BLAST of Gcaud2308.t1 vs. uniprot
Match: A0A1X2GE48_9FUNG (General transcription and DNA repair factor IIH n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GE48_9FUNG) HSP 1 Score: 321 bits (822), Expect = 2.500e-103 Identity = 173/395 (43.80%), Postives = 233/395 (58.99%), Query Frame = 0
Query: 18 GYAWESSKIRSWEQIEEDPETGRLKSY--QIDHQRAKKKIRDDGPSGVRRGIIRFCVIIVDMSQSLRSTDLKPSRADLVIDSVQSFIKEFFDQNPISQLSVIMTRDGKALRLSTFSSNEKHHIEAVQKASRMGPGGNASLQNSLTVAKNNLASVPPYGMKEIIIAYGSLSTCDPGDIHQTIESLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHVIPPPTVNRQVSASLIRMGFPMLERLEQPTLYCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTVDEREPDTLQSNGAPNDAHSERVTELLNNDSVRCTGCKTMLRK-EKALRLLCPKCLNVFCIDCDSFIHDSLHHCPGC 409
GY+WE RSW+ ++ED E GRL S Q+ QR +++ D ++RGIIR ++VD+S+++ DL+PSR +L I Q FI EFFDQNPISQL +I+T DG A +L+ S N H A+Q S + G SLQN+L +A+ ++ VP +G KEII+ +GSL+TCDPGDIH+TI+SL E +R S +GL AE+ I + ++ G+Y + NE HF+D V PPP + +ASL+ MGFP +E T C GY CPRC + + E+PS+C +CGLTLVSSPHLARSYHHLFPV F + R+P + C C K + A + CPKC FC DCD FIH+ LH+CPGC
Sbjct: 29 GYSWEEEYKRSWDVLQEDAE-GRLSSVVAQLQQQRKRRRHLKD-TDVIQRGIIRHVFLVVDLSEAMNDKDLRPSRIELTIMYAQQFITEFFDQNPISQLGIIVTHDGIAEKLTELSGNPSDHTRALQNKSNIETSGEPSLQNALQLARASMVGVPNHGSKEIIMVFGSLTTCDPGDIHETIDSLQREMVRVSIVGLAAEVQICKVISHATKGSYGVILNEAHFKDLLFEAVPPPPVAPNKSTASLVTMGFPK-RLMEHHTSLCVCHAKLTSGGYICPRCKSKVCELPSDCDICGLTLVSSPHLARSYHHLFPVDNFDEI--RQP----------------------GHTTHCYSCLAYFDKNDLAGQFTCPKCKKEFCADCDLFIHEVLHNCPGC 396
BLAST of Gcaud2308.t1 vs. uniprot
Match: A0A4P9XPD2_9FUNG (General transcription and DNA repair factor IIH n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XPD2_9FUNG) HSP 1 Score: 321 bits (823), Expect = 2.670e-103 Identity = 172/417 (41.25%), Postives = 255/417 (61.15%), Query Frame = 0
Query: 8 DDEDIKRIREGYAWESSKIRSWEQIEEDPETGRLKSY--QIDHQRAKKKIRDDGPSGVRRGIIRFCVIIVDMSQSLRSTDLKPSRADLVIDSVQSFIKEFFDQNPISQLSVIMTRDGKALRLSTFSSNEKHHIEAVQKASRMGPGGNASLQNSLTVAKNNLASVPPYGMKEIIIAYGSLSTCDPGDIHQTIESLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHVIPPPTVNRQVSASLIRMGFPMLERLEQPTL-YCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTVDEREPDTLQSNGAPNDAHSERVTELLNNDSVRCTGCKTM---------LRKEKALRLLCPKCLNVFCIDCDSFIHDSLHHCPGCGNQ 412
DDED + +G AWE K RSW+ ++ED E G L+S I Q+ ++++ D + ++RGIIRF +++D+S ++ DL+PSR DL + +SFI E+FDQNPISQL +I+TRDG A +L+ S N HI A+++ G SLQN+L A+++L+ VP +G +E+++ GSL+TCDPG+I TI+ EKIRCS IGL AE+ + R + K+ GTY + NE H++D V PP + +ASL+ MGFP P++ C+ + G GY CP+CSA + E+P++C +CG+ LV+SPHLARSYHHLFPV FV V ++GA D+ RC GC++ L + + R CP+C ++FC++CD F+H++LH+CPGC +
Sbjct: 22 DDEDTGK-EQGLAWEEFK-RSWDVLQEDEE-GSLQSVVATIKQQQIRRRLLRDTDT-IQRGIIRFLFLVLDLSNAMLEKDLRPSRLDLTLTLAESFIGEYFDQNPISQLGIIITRDGVAEKLTELSGNPMEHIRALKEKKNKETAGEPSLQNALETARSSLSHVPTHGSREVLVLCGSLTTCDPGNIFDTIDRFKREKIRCSVIGLTAEVQVCRTIAKETNGTYGVVLNEPHYKDLLFELVTPPAVTSSAEAASLVAMGFPRRITERTPSMCMCHKKPVLG--GYVCPQCSAKVCELPTDCDVCGMALVASPHLARSYHHLFPVKNFVEVK------WDASGA---------------DTARCFGCRSSFETPPQSGALAQRASDRFRCPECKHLFCLECDLFVHEALHNCPGCAQR 411
BLAST of Gcaud2308.t1 vs. uniprot
Match: A0A1X2IXS6_9FUNG (General transcription and DNA repair factor IIH n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IXS6_9FUNG) HSP 1 Score: 320 bits (821), Expect = 3.650e-103 Identity = 167/395 (42.28%), Postives = 236/395 (59.75%), Query Frame = 0
Query: 18 GYAWESSKIRSWEQIEEDPETGRLKSY--QIDHQRAKKKIRDDGPSGVRRGIIRFCVIIVDMSQSLRSTDLKPSRADLVIDSVQSFIKEFFDQNPISQLSVIMTRDGKALRLSTFSSNEKHHIEAVQKASRMGPGGNASLQNSLTVAKNNLASVPPYGMKEIIIAYGSLSTCDPGDIHQTIESLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHVIPPPTVNRQVSASLIRMGFPMLERLEQPTLYCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTVDEREPDTLQSNGAPNDAHSERVTELLNNDSVRCTGCKTMLRK-EKALRLLCPKCLNVFCIDCDSFIHDSLHHCPGC 409
GY+WE RSW+ ++ED E GRL S Q+ QR ++++ D ++RGIIR +I+D+S+++ DL+PSR +L + VQ FI EFFDQNPISQL +I+TRDG A +L+ N H A+Q + G SLQN+L +A+ ++ VP +G KE+++ +G+L+TCDPGDIH+TI+ L + +R S +GL AE+ I R L++ G+Y + NE H++D + PP + + +ASL+ MGFP + TL + N GY CPRC + + E+PS+C +CGLTLVSSPHLARSYHHLFPV F + R+P S C C K + A + CPKC + FC DCD FIH+ LH+CPGC
Sbjct: 29 GYSWEEEYKRSWDVLQEDAE-GRLSSVVAQLQQQRKRRRLLKD-TDVIQRGIIRHVFLILDLSEAMNEKDLRPSRVELTLTYVQQFINEFFDQNPISQLGIIVTRDGIAEKLTELGGNPSDHTRALQSKKNVETSGEPSLQNALQLARASMVGVPSHGSKEVLLVFGALTTCDPGDIHETIDLLQKDMVRVSIVGLAAEVQICRMLSRATKGSYGVILNEAHYKDLLFEAIPPPAVSSTKNTASLVTMGFPKRLMEDHATLCVCHSNKLTLGGYICPRCKSKVCELPSDCDVCGLTLVSSPHLARSYHHLFPVDNFDEI--RQP----------------------GHSTHCFSCLAPFDKNDLAGQFTCPKCKHEFCADCDIFIHEVLHNCPGC 397 The following BLAST results are available for this feature:
BLAST of Gcaud2308.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2308.t1 ID=Gcaud2308.t1|Name=Gcaud2308.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=420bpback to top |