Gcaud2296.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2296.t1
Unique NameGcaud2296.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length216
Homology
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BLAST of Gcaud2296.t1 vs. uniprot
Match: A0A2V3IU88_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU88_9FLOR)

HSP 1 Score: 85.9 bits (211), Expect = 2.160e-17
Identity = 65/113 (57.52%), Postives = 76/113 (67.26%), Query Frame = 0 
Query:  103 ASSSSGSMPASSTQQLPNSVRNAPPELRSAIRRKQNNESARRSRERKRAEEAEMKRRMNENDARIQHLEREVENLTAALLMDEENESGSRSGRRHPNPPSSPSSNPGFYGDPF 215
            ASSS  + P S  Q+LP+SVR+APPELR+AIRRKQNNESA+RS                     IQ+LEREVE LTAAL+ D +  +  RSGRR  NPPSSPS+ PGFYGDPF
Sbjct:   72 ASSSHAAGP-SGGQELPSSVRHAPPELRTAIRRKQNNESAKRSXXXXXXXXXXXXXXXXXXXXXIQNLEREVETLTAALVNDMD-PAEERSGRR--NPPSSPSTKPGFYGDPF 180
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BLAST of Gcaud2296.t1 vs. uniprot
Match: A0A2V3J5H8_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5H8_9FLOR)

HSP 1 Score: 84.3 bits (207), Expect = 6.770e-17
Identity = 57/101 (56.44%), Postives = 71/101 (70.30%), Query Frame = 0 
Query:  118 LPNSVRNAPPELRSAIRRKQNNESARRSRERKRAEEAEMKRRMNENDARIQHLEREVENLTAALLMDEENES---GSRSGRRHPNPPSSPSSNPGFYGDPF 215
            +P S+++APPELR AI+RKQN E A+RSRERKRAEE +M R++  NDARI+ LE++VE LT  L  D         +R  RR    PSSPS+ PGFYGDPF
Sbjct:   73 IPYSLKDAPPELRPAIKRKQNREHAKRSRERKRAEEEDMIRKLECNDARIRMLEQQVETLTEELRNDPAPNGMVPSARYDRREV--PSSPSTKPGFYGDPF 171
The following BLAST results are available for this feature:
BLAST of Gcaud2296.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IU88_9FLOR2.160e-1757.52BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3J5H8_9FLOR6.770e-1756.44BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 139..187
NoneNo IPR availableGENE3D1.20.5.170coord: 125..186
e-value: 7.2E-7
score: 31.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 129..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..49
NoneNo IPR availableCDDcd14686bZIPcoord: 132..179
e-value: 9.18007E-8
score: 45.2289
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 131..179
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 126..189
e-value: 0.0018
score: 27.4
IPR004827Basic-leucine zipper domainPFAMPF07716bZIP_2coord: 134..178
e-value: 7.6E-8
score: 32.3
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 134..148
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 128..178
score: 9.23162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_220_length_36054_cov_4.510163contigNODE_220_length_36054_cov_4.510163:33131..33909 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2296.t1Gcaud2296.t1Gracilaria caudata M_176_S67 malemRNANODE_220_length_36054_cov_4.510163 33131..33909 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2296.t1 ID=Gcaud2296.t1|Name=Gcaud2296.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=216bp
XPRINHQHKKNPTIAFHHNHHNNNSGQNKRSSSASSSRDHPSTPPHSPEM
TSDKGPKKRSPKPSSSSSHSHASRSNRPSGSSQSSSRHRHSTPSASHQTN
PAASSSSGSMPASSTQQLPNSVRNAPPELRSAIRRKQNNESARRSRERKR
AEEAEMKRRMNENDARIQHLEREVENLTAALLMDEENESGSRSGRRHPNP
PSSPSSNPGFYGDPF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP