Gcaud2289.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2289.t1
Unique NameGcaud2289.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length185
Homology
BLAST of Gcaud2289.t1 vs. uniprot
Match: A0A2V3IPN4_9FLOR (ADP-ribose pyrophosphatase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPN4_9FLOR)

HSP 1 Score: 173 bits (438), Expect = 3.040e-51
Identity = 95/182 (52.20%), Postives = 117/182 (64.29%), Query Frame = 0
Query:    4 LSAFVLLQVVQPSLGFTQSLKHYPNRLVCTTAGLKPPKL-------AVSTALFRKHGTRPEVLLIKRGREPNKGLWSLPGGKVEEHENLQDAALRELLEETAIVSSHCRILPHPIDIAHVPSQRPAFRIYVFAGICDTDVILKAGDDAADVGFFRTDEILSLALVDGLENRVLKALDAILDD 178
            LS F+  + + P  G     +    R V T    K P +       AVS ALFR +    E+LL++RG EPNKGLWSLPGG+V + E+L+ AALRELLEET I+S  C +L  PIDIA VPS +P + IYVFAG+CD  +   AGDDA D  F RTD +  L LV+GLE+RVLKAL AILDD
Sbjct:   34 LSVFMPSRSIGPLCGTVLDSQSRAGRPVRTLMESKTPNMRYESLSVAVSMALFRNNRFHSEILLVRRGNEPNKGLWSLPGGRVRDEEDLRCAALRELLEETGIMSHQCHLLSQPIDIALVPSDKPLYHIYVFAGVCDPQLEPIAGDDARDARFSRTDALSKLTLVNGLESRVLKALSAILDD 215          
BLAST of Gcaud2289.t1 vs. uniprot
Match: A0A7V6LA33_9BACT (NUDIX hydrolase n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7V6LA33_9BACT)

HSP 1 Score: 89.7 bits (221), Expect = 1.560e-19
Identity = 53/127 (41.73%), Postives = 72/127 (56.69%), Query Frame = 0
Query:   40 PKLAVSTALFRKHGTRPEVLLIKRGREPNKGLWSLPGGKVEEHENLQDAALRELLEETAIVSSHCRILPHPIDIAHV-----PSQRPAFRIY--VFAGICDTDVILKAGDDAADVGFFRTDEILSLA 159
            P L     LF K+     VLLI+RG+EP  G W+LPGG V+E+E+++DAALREL EET IV          +D+  V     P + P       V+  I D++   +AGDDAA+ G+F  DE+  LA
Sbjct:    9 PALTADVVLFVKNDKETRVLLIRRGKEPFMGSWALPGGFVDENEDIKDAALRELKEETGIVG---------LDLIQVGAYGKPGRDPRGHTVSVVYTAILDSEPEYQAGDDAAEAGWFTIDELPGLA 126          
BLAST of Gcaud2289.t1 vs. uniprot
Match: UPI00164906C0 (NUDIX domain-containing protein n=2 Tax=Stappia TaxID=152161 RepID=UPI00164906C0)

HSP 1 Score: 89.0 bits (219), Expect = 2.390e-19
Identity = 57/140 (40.71%), Postives = 77/140 (55.00%), Query Frame = 0
Query:   36 GLKPPKLAVSTALFRKHGTRPEVLLIKRGREPNKGLWSLPGGKVEEHENLQDAALRELLEETAIVSSHCRILPHPIDIAH-VPSQRPAFRIYVFAGIC--DTDVILKAGDDAADVGFFRTDEILSLALVDGLENRVLKAL 172
            G   P+L VS  L +    R EVLLIKRG+ P  G WSLPGG VE  E L++AA REL EET + +   ++ P P++I   VP      R +V A       +  L+ GDDAAD  FF  D +  L++  G   R+L+ +
Sbjct:    3 GANHPRLGVSILLQQ----RDEVLLIKRGKPPFAGHWSLPGGTVEFGERLREAAARELFEETGLSA---QLEPVPVEIVELVPDTATGTRHFVIAVFLARQPEGRLRPGDDAADAAFFHADTLGGLSMTPGTAARILRLI 135          
BLAST of Gcaud2289.t1 vs. uniprot
Match: UPI0015615C4A (NUDIX domain-containing protein n=1 Tax=Hongsoonwoonella zoysiae TaxID=2821844 RepID=UPI0015615C4A)

HSP 1 Score: 88.6 bits (218), Expect = 3.550e-19
Identity = 57/136 (41.91%), Postives = 76/136 (55.88%), Query Frame = 0
Query:   40 PKLAVSTALFRKHGTRPEVLLIKRGREPNKGLWSLPGGKVEEHENLQDAALRELLEETAIVSSHCRILPHPIDIAHVPSQRP---AFRIYVFAGICDT--DVILKAGDDAADVGFFRTDEILSLALVDGLENRVLK 170
            P+L VS    R      EVLL+KRG+EP  G WSLPGG VE  E L DAA REL EET++ +   R+ P P +I  +  +R    A   +V A  C T      +AGDDAAD  + RT ++ +L +  G   R+L+
Sbjct:    5 PRLGVSVLCLRNR----EVLLVKRGKEPYLGHWSLPGGLVEFGEALVDAARRELFEETSVTA---RLEPEPFEIFDIIQKREDGAAAAHFVLAVFCGTYEKGEARAGDDAADAAWVRTCDLETLMMTPGTAARILR 133          
BLAST of Gcaud2289.t1 vs. uniprot
Match: A0A1T4Z998_9ACTN (ADP-ribose pyrophosphatase YjhB, NUDIX family n=1 Tax=Aeromicrobium choanae TaxID=1736691 RepID=A0A1T4Z998_9ACTN)

HSP 1 Score: 84.3 bits (207), Expect = 1.160e-17
Identity = 50/128 (39.06%), Postives = 73/128 (57.03%), Query Frame = 0
Query:   38 KPPKLAVSTALFRKHGTRPEVLLIKRGREPNKGLWSLPGGKVEEHENLQDAALRELLEETAIVSSHCRILPHPIDIAHVPS-QRPAFRIYVFAGICDTDVILKAGDDAADVGFFRTDEILSLALVDGL 164
            +PP LA S  +         +LL++RGR+P +GLWS+PGGKVE  E+L+ A  RE+LEET +  +    + H + +  +P+     F I+ FA    T   L AGDDA D  +F  +++  L LVD L
Sbjct:    3 EPPVLAASAVIVEDG----RILLVRRGRDPGRGLWSVPGGKVEPGESLEAACAREVLEETGLTVT----VGHELWLVRLPTGDGREFEIHDFAATA-TGGTLLAGDDADDAAWFPLEQLADLPLVDSL 121          
BLAST of Gcaud2289.t1 vs. uniprot
Match: UPI000D113494 (NUDIX domain-containing protein n=1 Tax=Pannonibacter carbonis TaxID=2067569 RepID=UPI000D113494)

HSP 1 Score: 84.0 bits (206), Expect = 2.780e-17
Identity = 47/118 (39.83%), Postives = 67/118 (56.78%), Query Frame = 0
Query:   57 EVLLIKRGREPNKGLWSLPGGKVEEHENLQDAALRELLEETAIVSSHCRILPHPIDI--AHVPSQRPAFRIYVFAGICDTDVILKAGDDAADVGFFRTDEILSLALVDGLENRVLKAL 172
            +VLL+KRG+ P  G WSLPGG+VE  E+L +AALREL EET + +     L  P++   A   +  P + + VF G C  D +  AGDDAA V     +++  L +  G   R+ + L
Sbjct:   36 KVLLVKRGKAPYAGAWSLPGGRVEPGESLVEAALRELREETGLAAP----LTGPVETFEAGRSADHPGYLLSVFIGACPPDTLPLAGDDAAAVSVTALEDLDRLEMTPGTAERIRRLL 149          
BLAST of Gcaud2289.t1 vs. uniprot
Match: A0A2A4LH20_9HYPH (Nudix hydrolase domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A2A4LH20_9HYPH)

HSP 1 Score: 83.6 bits (205), Expect = 2.980e-17
Identity = 54/129 (41.86%), Postives = 76/129 (58.91%), Query Frame = 0
Query:   40 PKLAVSTALFRKHGTRPEVLLIKRGREPNKGLWSLPGGKVEEHENLQDAALRELLEETAIVSSHCRILPHP--IDIAHVPSQRPAFRIYVF--AGICDTDVILKAGDDAADVGFFRTDEILSLALVDGL 164
            P LAV   + R      ++LL+KRGREPNKGLW+LPGG VE  E+LQDA +RE+ EE  +   +   L +   ID   +   +  + + VF  A +  T    KAGDDA++V +F   +I  L++VDGL
Sbjct:   10 PILAVVCLIHRSK----DILLVKRGREPNKGLWALPGGLVELGESLQDAIIREVREECNVTIHNPEFLQYREIIDTKSIAMTKFHYVLMVFKTAKVIGT---AKAGDDASEVCWFDVSKIGELSVVDGL 131          
BLAST of Gcaud2289.t1 vs. uniprot
Match: UPI000999D4F4 (NUDIX domain-containing protein n=1 Tax=Aeromicrobium choanae TaxID=1736691 RepID=UPI000999D4F4)

HSP 1 Score: 84.3 bits (207), Expect = 3.250e-17
Identity = 50/128 (39.06%), Postives = 73/128 (57.03%), Query Frame = 0
Query:   38 KPPKLAVSTALFRKHGTRPEVLLIKRGREPNKGLWSLPGGKVEEHENLQDAALRELLEETAIVSSHCRILPHPIDIAHVPS-QRPAFRIYVFAGICDTDVILKAGDDAADVGFFRTDEILSLALVDGL 164
            +PP LA S  +         +LL++RGR+P +GLWS+PGGKVE  E+L+ A  RE+LEET +  +    + H + +  +P+     F I+ FA    T   L AGDDA D  +F  +++  L LVD L
Sbjct:   45 EPPVLAASAVIVEDG----RILLVRRGRDPGRGLWSVPGGKVEPGESLEAACAREVLEETGLTVT----VGHELWLVRLPTGDGREFEIHDFAATA-TGGTLLAGDDADDAAWFPLEQLADLPLVDSL 163          
BLAST of Gcaud2289.t1 vs. uniprot
Match: A0A7W2BKJ3_9HYPH (NUDIX hydrolase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7W2BKJ3_9HYPH)

HSP 1 Score: 83.2 bits (204), Expect = 3.790e-17
Identity = 60/135 (44.44%), Postives = 72/135 (53.33%), Query Frame = 0
Query:   40 PKLAVSTALFRKHGTRPEVLLIKRGREPNKGLWSLPGGKVEEHENLQDAALRELLEETAIVSSHCRILPHPIDIAHVPSQRPAFRIYVFAGICDTDVILKAGDDAADVGFFRTDEILSL----ALVDGLENRVLK 170
            P L VS  +  +      VLL KRGREP KGLWSLPGGKVE  E L DAA RE+LEET I     R +   ++I H P     F I VFA          AGDDA + G+F  D + +L    A+  G   RVL+
Sbjct:    7 PVLGVSCLVLHED----HVLLAKRGREPAKGLWSLPGGKVEHAERLHDAAFREVLEETGIRVCGQRFMEF-VEIIH-PDYH--FVIAVFATRMMDRAPPSAGDDAEEAGWFALDALEALDQTRAITPGTYARVLR 133          
BLAST of Gcaud2289.t1 vs. uniprot
Match: A0A857CBE1_9HYPH (NUDIX domain-containing protein n=2 Tax=Stappia TaxID=152161 RepID=A0A857CBE1_9HYPH)

HSP 1 Score: 82.4 bits (202), Expect = 8.100e-17
Identity = 53/136 (38.97%), Postives = 72/136 (52.94%), Query Frame = 0
Query:   40 PKLAVSTALFRKHGTRPEVLLIKRGREPNKGLWSLPGGKVEEHENLQDAALRELLEETAIVSSHCRILPHPIDIAH-VPSQRPAFRIYVFAGI--CDTDVILKAGDDAADVGFFRTDEILSLALVDGLENRVLKAL 172
            P+L VS  +F +H    +VLL+KRG+EP  G WSLPGG VE  E L++ A REL EET + +   R+ P P ++   VP      R +V A          L+ GDDAAD  FF       L +  G   R+L+ +
Sbjct:    7 PRLGVS--VFLRH--EDKVLLVKRGKEPFAGYWSLPGGSVEFGERLREGAARELFEETGLSA---RLEPAPAELVELVPQDHAPGRHFVIAVFRASHPQGTLQPGDDAADAAFFEPGAFADLTMTPGTAARLLRLI 135          
The following BLAST results are available for this feature:
BLAST of Gcaud2289.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPN4_9FLOR3.040e-5152.20ADP-ribose pyrophosphatase n=1 Tax=Gracilariopsis ... [more]
A0A7V6LA33_9BACT1.560e-1941.73NUDIX hydrolase n=1 Tax=Bacteroidales bacterium Ta... [more]
UPI00164906C02.390e-1940.71NUDIX domain-containing protein n=2 Tax=Stappia Ta... [more]
UPI0015615C4A3.550e-1941.91NUDIX domain-containing protein n=1 Tax=Hongsoonwo... [more]
A0A1T4Z998_9ACTN1.160e-1739.06ADP-ribose pyrophosphatase YjhB, NUDIX family n=1 ... [more]
UPI000D1134942.780e-1739.83NUDIX domain-containing protein n=1 Tax=Pannonibac... [more]
A0A2A4LH20_9HYPH2.980e-1741.86Nudix hydrolase domain-containing protein n=1 Tax=... [more]
UPI000999D4F43.250e-1739.06NUDIX domain-containing protein n=1 Tax=Aeromicrob... [more]
A0A7W2BKJ3_9HYPH3.790e-1744.44NUDIX hydrolase n=1 Tax=Hyphomicrobiales bacterium... [more]
A0A857CBE1_9HYPH8.100e-1738.97NUDIX domain-containing protein n=2 Tax=Stappia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020476NUDIX hydrolasePRINTSPR00502NUDIXFAMILYcoord: 72..86
score: 41.31
coord: 86..101
score: 44.19
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 36..174
e-value: 2.0E-25
score: 91.1
NoneNo IPR availablePANTHERPTHR43736ADP-RIBOSE PYROPHOSPHATASEcoord: 38..175
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..184
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 41..160
e-value: 3.3E-17
score: 62.7
IPR000086NUDIX hydrolase domainPROSITEPS51462NUDIXcoord: 39..173
score: 13.617518
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 30..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_220_length_36054_cov_4.510163contigNODE_220_length_36054_cov_4.510163:14770..15324 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2289.t1Gcaud2289.t1Gracilaria caudata M_176_S67 malemRNANODE_220_length_36054_cov_4.510163 14770..15324 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2289.t1 ID=Gcaud2289.t1|Name=Gcaud2289.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=185bp
MRGLSAFVLLQVVQPSLGFTQSLKHYPNRLVCTTAGLKPPKLAVSTALFR
KHGTRPEVLLIKRGREPNKGLWSLPGGKVEEHENLQDAALRELLEETAIV
SSHCRILPHPIDIAHVPSQRPAFRIYVFAGICDTDVILKAGDDAADVGFF
RTDEILSLALVDGLENRVLKALDAILDDTNDLNF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020476Nudix_hydrolase
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase-like_dom_sf