Gcaud2286.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2286.t1
Unique NameGcaud2286.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length215
Homology
BLAST of Gcaud2286.t1 vs. uniprot
Match: A0A2V3IUE5_9FLOR (PDDEXK_1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUE5_9FLOR)

HSP 1 Score: 266 bits (681), Expect = 2.030e-87
Identity = 121/191 (63.35%), Postives = 153/191 (80.10%), Query Frame = 0
Query:   23 RHMSGLRTHELFPGMRPGTFLCEDDDPWIEGLPITPPGQNHSVYIRGKIDALVRFDDGTYGVIDFKTSSVAKTSATYSRQLHAYATALENPSDNSQLEKISVSELGLVVYTPSEFHTPLDKDGKIQAAMTGGIQYIRIDRDDPGFLKFLAEVVDVLDMPEAPPPKLATGRNFSSCSYCNYLHHAHKNGLLL 213
            R MSGL+T+ L P MRPG FLCE++DPWIE LPITPPG  +SVYIRGK+DA+V + DGTYG+IDFKTSS    S  YSRQLHAYATA+ENP+ +S L+K  +SELGLV+Y+PSEFHTP+D +G++QAAMTG ++Y++++RDD GFL+FL EV+DVL+MPEAPP       +  +C YC YLH A  +GLLL
Sbjct:   48 RRMSGLQTNSLIPDMRPGKFLCEEEDPWIECLPITPPGHKNSVYIRGKLDAMVEYADGTYGIIDFKTSSSTGASTLYSRQLHAYATAIENPTTDSPLKKARISELGLVIYSPSEFHTPVDSEGRVQAAMTGDLKYVKVERDDAGFLQFLGEVLDVLNMPEAPPFSSRIRSSAPTCPYCKYLHQARDSGLLL 238          
BLAST of Gcaud2286.t1 vs. uniprot
Match: R7QKI4_CHOCR (PDDEXK_1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKI4_CHOCR)

HSP 1 Score: 169 bits (429), Expect = 4.710e-50
Identity = 84/148 (56.76%), Postives = 108/148 (72.97%), Query Frame = 0
Query:   70 KIDALVRFDDGTYGVIDFKTSSVAKTSATYSRQLHAYATALENPSDNSQLEKISVSELGLVVYTPSEFHTPLDKDGKIQAAMTGGIQYIRIDRDDPGFLKFLAEVVDVLDMPEAPPP-----KLATGRNFSSCSYCNYLHHAHKNGLL 212
            ++D LVRFDDGT+GVIDFKTS  AK+S TYSRQLHAYA A+ENPS  S+L + +VS++GLVVYT  +FHTP  ++G I AA+TG + Y+++ RDD  F  FL+EV+DVL +PEAP       K   G +FSSC YC +LH A   GL+
Sbjct:   29 QVDCLVRFDDGTFGVIDFKTSQAAKSSLTYSRQLHAYALAIENPSTQSELLQGTVSDMGLVVYTLKDFHTPATENGDISAALTGDLTYVQVPRDDKAFEGFLSEVLDVLILPEAPXXXXXLLKRKWGASFSSCPYCQFLHDAKMRGLI 176          
BLAST of Gcaud2286.t1 vs. uniprot
Match: A0A7S1TB95_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TB95_9RHOD)

HSP 1 Score: 160 bits (405), Expect = 7.180e-44
Identity = 86/179 (48.04%), Postives = 113/179 (63.13%), Query Frame = 0
Query:   27 GLRTHELFPGMRP--GTFLCEDDDPWIEGLPITPPGQ-NHSVYIRGKIDALVRFDDGTYGVIDFKTSSVAKTSATYSRQLHAYATALENPSDNSQLEKISVSELGLVVYTPSEFHTPLDKDGKIQAAMTGGIQYIRIDRDDPGFLKFLAEVVDVLDMPEAPPPKLATGRNFSSCSYCNY 202
            G RT ++F G     G FLCE+DD W+E  PI  P   + S+ IRGKID L+R DDG+Y VIDFKTS+V      Y RQL AYATA+ENP+ N+ LEK+ VS+LGLVV+ PSEF      + + +A + G + YI   R    F KFL EVV VLD  ++PP +  +G    +C +C+Y
Sbjct:  220 GKRTEDIFSGQTAPAGEFLCEEDDAWVESQPINVPSHPSSSIVIRGKIDCLIRLDDGSYAVIDFKTSNVDTWLTKYDRQLEAYATAMENPAPNADLEKLKVSQLGLVVFEPSEFGHVQKNNSRTRAELGGSLTYIDRPRQTSAFSKFLQEVVAVLD-DDSPPVR--SGGMRQNCPFCSY 395          
BLAST of Gcaud2286.t1 vs. uniprot
Match: A0A5J4YTQ4_PORPP (PDDEXK_1 domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTQ4_PORPP)

HSP 1 Score: 152 bits (384), Expect = 1.350e-41
Identity = 78/197 (39.59%), Postives = 122/197 (61.93%), Query Frame = 0
Query:   26 SGLRTHELFPGMRPGTFLCEDDDPWIEGLPITPPGQNHSVYIRGKIDALVRFDDG-TYGVIDFKTSS--VAKTSATYSRQLHAYATALENPSDNSQLEKISVSELGLVVYTPSEF-------HTPLDKDGK-IQAAMTGGIQYIRIDRDDPGFLKFLAEVVDVLDMPEAPPPKLATGRNFSS-CSYCNYLHHAHKNG 210
            +G+RT ++ P MRPG FLC+  DPW++  PI  PG +  V I GK+D LV+FDD  T+G++DFKTS+   + +  +Y RQLHAYA  L+N S   + + + +S+L L+VY P  F        +P D   + I   + G ++Y+ ++RDD  F++FL+EV+D+L++P AP        N++S C +C+YL     +G
Sbjct:  118 AGVRTQDVVPEMRPGVFLCDKSDPWLQSAPIDVPGHSSKVVISGKVDCLVQFDDDKTFGIVDFKTSNQDTSNSKTSYERQLHAYALCLQNLSGGKE-KSLKISDLALIVYQPQLFVGVRRKAASPSDPQRREIGGRLDGNLKYVPLERDDTKFMRFLSEVLDILELP-APXXXXXQSANYNSGCPFCSYLVEGQASG 312          
BLAST of Gcaud2286.t1 vs. uniprot
Match: A0A1Q7RC19_9BACT (PDDEXK_1 domain-containing protein n=4 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A1Q7RC19_9BACT)

HSP 1 Score: 128 bits (322), Expect = 2.370e-33
Identity = 79/216 (36.57%), Postives = 113/216 (52.31%), Query Frame = 0
Query:    5 WEQITA-LRRPTSPSCG--------KNRHMSGLRTHELFPGMRPGTFLCEDDDPWIEGLPITPPGQNHSVYIRGKIDALVRFDDGTYGVIDFKTSS-VAKTSATYSRQLHAYATALENPSDNSQLEKISVSELGLVVYTPSEFHTPLDKDGKIQAAMTGGIQYIRIDRDDPGFLKFLAEVVDVLDMPEAPPPKLATGRNFSSCSYCNYLHHAHKNG 210
            W ++T   RRP  P             +H +G RT ++ P +  G  + +  + W+E +P+  PG      IRG++D LVRFDDG+  VIDFKTS   A     Y RQLH+YA A+EN S N +L    V+ LGLVV+ P  F    +KD   +A + GG+ +I I ++D  FL FL +V++VL     P P         SC++C Y   +   G
Sbjct:   25 WLKVTRDFRRPQIPMAKIFTVIDEEMRKHFAGRRTGDVLPALPSG--VLDTQEHWVESVPLPIPGYPARCVIRGRLDCLVRFDDGSAAVIDFKTSERKAAHIPLYGRQLHSYAVAIENASPN-KLSLRPVTRLGLVVFDPDRF----EKDAAGRAQLFGGLTWIEIQKNDASFLAFLKDVLNVLQQSSPPAPG-------PSCAFCQYRQASRARG 226          
BLAST of Gcaud2286.t1 vs. uniprot
Match: A0A363T440_9CHLR (PDDEXK_1 domain-containing protein n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A363T440_9CHLR)

HSP 1 Score: 126 bits (317), Expect = 1.320e-32
Identity = 75/215 (34.88%), Postives = 112/215 (52.09%), Query Frame = 0
Query:    6 EQITALRRPTSPSCG--------KNRHMSGLRTHELFPGMRPGTFLCEDDDPWIEGLPITPPGQNHSVYIRGKIDALVRFDDGTYGVIDFKTSSV-AKTSATYSRQLHAYATALENPSDNSQLEKISVSELGLVVYTPSEFHTPLDKDGKIQAAMTGGIQYIRIDRDDPGFLKFLAEVVDVLDMPEAPPPKLATGRNFSSCSYCNYLHHAHKNGL 211
            + I  + RP +P              H +G    E+ P M  G  +    + W+E  PI+ PG + SV++RGK DA++ F+DG+YGV+DFKTS   A     YSRQLHAYA ALE+P+   +L    +S LGL++  P        ++       T    ++ I   + GFL F+ +VV +L++PE PPP          C+YC Y  HA ++G+
Sbjct:   27 KHIHGINRPAAPFPAVFGAIDRLMKAHFAGHPAAEIDPSMPAG--IISVSEKWVESKPISLPGHSLSVFLRGKTDAMLSFEDGSYGVVDFKTSEPKASQIPFYSRQLHAYAYALEHPAPE-KLWLSPISRLGLLIEAPHATFNETSEEINFHFTST----WLEIPYREAGFLSFIDQVVTLLELPEPPPPN-------EKCAYCQYRQHARQHGM 227          
BLAST of Gcaud2286.t1 vs. uniprot
Match: A0A1F9ABN2_9DELT (PDDEXK_1 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RBG_13_52_11 TaxID=1797829 RepID=A0A1F9ABN2_9DELT)

HSP 1 Score: 124 bits (310), Expect = 1.460e-31
Identity = 74/192 (38.54%), Postives = 108/192 (56.25%), Query Frame = 0
Query:   21 KNRHMSGLRTHELFPGMRPGTFLCEDDDPWIEGLPITPPGQNHSVYIRGKIDALVRFDDGTYGVIDFKTSSVAKTSAT-YSRQLHAYATALENPSDNSQLEKISVSELGLVVYTPSEFHTPLDKDGKIQAAMTGGIQYIRIDRDDPGFLKFLAEVVDVLDMPEAPPPKLATGRNFSSCSYCNYLHHAHKNGL 211
            KN ++ G+RT E+ P +  G  +    +  +E  PI     + S +I+GK D +++FDDGTYGVIDFKT+         Y+RQLH+YA  LENP+   +     +S+LGL+VY P E+   L  D   + A+ G I +I I R+D GF+ FL EV +VL+MPE P           +C +C Y   + + GL
Sbjct:   51 KNYYL-GMRTEEISPALPNG--VVRYSEKGVESKPIYSSNSSSSCFIKGKFDTVLQFDDGTYGVIDFKTAEAKSEHVPLYARQLHSYAHCLENPAPG-KFSLTPISKLGLLVYEPQEYGC-LSSD---RVALHGSITWINIPRNDDGFIAFLEEVFEVLNMPEPPAGS-------PTCVWCQYRDSSRRTGL 227          
BLAST of Gcaud2286.t1 vs. uniprot
Match: A0A7S0BQT6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQT6_9RHOD)

HSP 1 Score: 119 bits (299), Expect = 9.930e-31
Identity = 69/160 (43.12%), Postives = 95/160 (59.38%), Query Frame = 0
Query:   60 GQNHSVYIRGKIDALVRFDDGTYGVIDFKTSSVAKTSATYSRQLHAYATALENPSDNSQLEKISVSELGLVVYTPSEF--------HTPLDKDGK-IQAAMTGGIQYIRIDRDDPGFLKFLAEVVDVLDMPEAPPPKLATGRNFSSCSYCNYLHHAHKNG 210
            G+   VYIRGKID LV  DD TY +IDFKTS +++  + YSRQLHAYA ALE PS  S++ + +V  +GLV Y P  F         +P +K G    A +TG   Y  ++++ P F ++L EVV+VL+  E P P         +CS+CNYL  A ++G
Sbjct:    2 GKESLVYIRGKIDCLVLNDDQTYSIIDFKTSEISRYLSIYSRQLHAYAMALEFPSKKSEIMQGAVKHMGLVCYEPQSFGFSKSGVKKSPENKKGTPATAGLTGICHYHEVEKNFPEFFRYLTEVVEVLE-GEIPDPD-------PNCSHCNYLRQAERDG 153          
BLAST of Gcaud2286.t1 vs. uniprot
Match: A0A3D3J6N4_9CHLR (PDDEXK_1 domain-containing protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A3D3J6N4_9CHLR)

HSP 1 Score: 114 bits (284), Expect = 1.300e-27
Identity = 68/174 (39.08%), Postives = 100/174 (57.47%), Query Frame = 0
Query:   30 THELFPGMRPGTFLCEDDDPWIEGLPITPPGQNHSVYIRGKIDALVRFDDGTYGVIDFKTSSV-AKTSATYSRQLHAYATALENPSDNSQLEKISVSELGLVVYTPSEFHTPLDKDGKIQAAMTGGIQYIRIDRDDPGFLKFLAEVVDVLDMPEAPPPKLATGRNFSSCSYCNY 202
            T E+ P + PG  + +  + W++  PI  P       IRG+ DA++ F+DG+YG+ID+KTS   A+ +A YSRQL AYA ALENP+  + L    ++ LGL + TP  +    +K    +AA      ++ + RD+  FL FL EV+ VLD P+  PP+ A      SC+ CNY
Sbjct:   56 TSEISPDLPPG--IVKYKEKWVKSSPIFFPEYASQCVIRGRFDAVIAFEDGSYGIIDYKTSDASAEKAAFYSRQLSAYAYALENPAPGA-LNFSPITRLGLFIITPHRY----EKISSEEAAFITRTTWMDVPRDERSFLAFLGEVMSVLDAPQ--PPQSA-----ESCALCNY 215          
BLAST of Gcaud2286.t1 vs. uniprot
Match: A0A7C3B6K0_9CHLR (PD-(D/E)XK nuclease family protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3B6K0_9CHLR)

HSP 1 Score: 112 bits (279), Expect = 5.240e-27
Identity = 68/163 (41.72%), Postives = 92/163 (56.44%), Query Frame = 0
Query:   50 WIEGLPITPPGQNHSVYIRGKIDALVRFDDGTYGVIDFKTSSVA-KTSATYSRQLHAYATALENPSDNSQLEKISVSELGLVVYTPSEFHTPLDKDGKIQAAMTGGIQYIRIDRDDPGFLKFLAEVVDVLDMPEAPPPKLATGRNFSSCSYCNYLHHAHKNGL 211
            W++  PIT PG +   YIRG  D ++R  DG+YGVIDFKTS V  K  A YSRQL AYA +LE+P+   +L    +++LGL+V+ PSEF   L K  ++Q    G + +     D+  FL FL +V  VL+ PEAP            C +C+Y   A   GL
Sbjct:   73 WVQSQPITLPGHSLQCYIRGIFDTVIRLSDGSYGVIDFKTSEVKEKNVAFYSRQLRAYAYSLEHPAAG-KLGLSPITKLGLLVFEPSEF---LQKGDQLQ--YIGRMAWQECPMDEGAFLAFLDKVYTVLERPEAPEAN-------EDCQFCSYRDKARNTGL 222          
The following BLAST results are available for this feature:
BLAST of Gcaud2286.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUE5_9FLOR2.030e-8763.35PDDEXK_1 domain-containing protein n=1 Tax=Gracila... [more]
R7QKI4_CHOCR4.710e-5056.76PDDEXK_1 domain-containing protein n=1 Tax=Chondru... [more]
A0A7S1TB95_9RHOD7.180e-4448.04Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YTQ4_PORPP1.350e-4139.59PDDEXK_1 domain-containing protein n=1 Tax=Porphyr... [more]
A0A1Q7RC19_9BACT2.370e-3336.57PDDEXK_1 domain-containing protein n=4 Tax=unclass... [more]
A0A363T440_9CHLR1.320e-3234.88PDDEXK_1 domain-containing protein n=1 Tax=Anaerol... [more]
A0A1F9ABN2_9DELT1.460e-3138.54PDDEXK_1 domain-containing protein n=1 Tax=Deltapr... [more]
A0A7S0BQT6_9RHOD9.930e-3143.13Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A3D3J6N4_9CHLR1.300e-2739.08PDDEXK_1 domain-containing protein n=2 Tax=Chlorof... [more]
A0A7C3B6K0_9CHLR5.240e-2741.72PD-(D/E)XK nuclease family protein n=1 Tax=Anaerol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038726PD-(D/E)XK endonuclease-like domain, AddAB-typePFAMPF12705PDDEXK_1coord: 57..202
e-value: 9.1E-10
score: 38.9
IPR011604PD-(D/E)XK endonuclease-like domain superfamilyGENE3D3.90.320.10coord: 12..205
e-value: 1.8E-13
score: 52.8
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 61..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_220_length_36054_cov_4.510163contigNODE_220_length_36054_cov_4.510163:8043..8900 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2286.t1Gcaud2286.t1Gracilaria caudata M_176_S67 malemRNANODE_220_length_36054_cov_4.510163 8043..8900 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2286.t1 ID=Gcaud2286.t1|Name=Gcaud2286.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=215bp
MWLWWEQITALRRPTSPSCGKNRHMSGLRTHELFPGMRPGTFLCEDDDPW
IEGLPITPPGQNHSVYIRGKIDALVRFDDGTYGVIDFKTSSVAKTSATYS
RQLHAYATALENPSDNSQLEKISVSELGLVVYTPSEFHTPLDKDGKIQAA
MTGGIQYIRIDRDDPGFLKFLAEVVDVLDMPEAPPPKLATGRNFSSCSYC
NYLHHAHKNGLLLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038726PDDEXK_AddAB-type
IPR011604PDDEXK-like_dom_sf
IPR011335Restrct_endonuc-II-like