Gcaud2257.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2257.t1 vs. uniprot
Match: A0A2V3J4X4_9FLOR (UV excision repair protein RAD23 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4X4_9FLOR) HSP 1 Score: 401 bits (1031), Expect = 1.000e-135 Identity = 231/310 (74.52%), Postives = 251/310 (80.97%), Query Frame = 0
Query: 28 SGSSSLVVGQEYEQTVRRICEMGFPEAEVKKALRAAFNNPDRAVDYLFNGIPESAMPSAPXXXXXXXXXXXXXXXXTGATP---NQSEPNAPAAGQQTSTRSAAAATPFNMFEAA--GNSPSAGGGGGSGSLDFLRSVPQFNLMRRLIQSNPAVLPQLLQQLENVNPSLMALIEDNQAEFTRLINEPIPEGEDGGDAAMEQLAQAMAGAXXXREGPXXGQILVTEEEHEQLHRLNELAAGFGLERAQVVETWLACDRNENLAANYLVENAEQLRADQAANAAAXXXXAEQDNSGQNQSDRPDQGNQGPPA 332
SG+S+LVVG EYEQTVRRICEMGFPEA+VK ALRAAFNNPDRAVDYLFNGIPE+ + P XXXXXXXXX P N + PA+ Q + R+AA TPFNMF GNSPS GGG+GSLDFLR+VPQFN MRRLIQ+NP +LPQLLQQ+EN+NPS+MALIE NQAEFTRLINEP+ EGEDGGD AMEQLAQAMAGA EG GQILVTEEEHEQLHRLNELAAGFGLE+AQVVETWLACDRNENLAANYLVENAEQLRADQAANAAA EQDN+ + SDRPDQGNQGPPA
Sbjct: 131 SGASALVVGPEYEQTVRRICEMGFPEADVKNALRAAFNNPDRAVDYLFNGIPENLQTTGPPAAAPPXXXXXXXXXSQTPPPPAANATRATPPASNQPSVPRTAAQGTPFNMFGGTTDGNSPS---GGGTGSLDFLRAVPQFNQMRRLIQANPTLLPQLLQQIENINPSIMALIEANQAEFTRLINEPVREGEDGGDEAMEQLAQAMAGAGASGEGLGPGQILVTEEEHEQLHRLNELAAGFGLEQAQVVETWLACDRNENLAANYLVENAEQLRADQAANAAADPATGEQDNNAHDPSDRPDQGNQGPPA 437
BLAST of Gcaud2257.t1 vs. uniprot
Match: M2Y6W5_GALSU (UV excision repair protein RAD23 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y6W5_GALSU) HSP 1 Score: 204 bits (520), Expect = 6.090e-59 Identity = 120/273 (43.96%), Postives = 159/273 (58.24%), Query Frame = 0
Query: 30 SSSLVVGQEYEQTVRRICEMGFPEAEVKKALRAAFNNPDRAVDYLFNGIPESAMPSAPXXXXXXXXXXXXXXXXTGATPNQSEPNAPAAGQQTSTRSAAAATPFNMFEAAGNSPSAGGG----GGSGSLDFLRSVPQFNLMRRLIQSNPAVLPQLLQQLENVNPSLMALIEDNQAEFTRLINEPIPEGEDGGDAAMEQLAQAMAG----AXXXREGPXXGQILVTEEEHEQLHRLNELAAGFGLERAQVVETWLACDRNENLAANYLVENAEQ 294
SS V+G +YE TV+ + EMGF E +VK+ALRAAF+NPDRAV+YLFNGIPE+ T T Q E ++G + A + PFNMFE + + GG G +GSLDFL +PQFN+MRRLIQ+NP +L +LQ+L NPSL+ LI NQ EF RL+NEP + E D +++L +++G E I V+ EE EQ+ RL L G+ RA ++E WLACDRNE LAANY++ N E+
Sbjct: 143 SSDFVIGSQYETTVKNLMEMGFEEQQVKRALRAAFHNPDRAVEYLFNGIPENL--ERELGQTSLPERTSPQVGHTDRTATQ-ENRTGSSGVSSIGNQATDSQPFNMFEPQRSQTAQQGGTESTGSTGSLDFLTRIPQFNVMRRLIQANPRILQPMLQELAQANPSLLDLIHQNQQEFVRLLNEPTEDSEGLSDEQVQELLNSISGLSEGGNTGEESSGVSYIQVSPEEREQIERLESLVGPMGVSRAAILEAWLACDRNEELAANYILSNLEE 412
BLAST of Gcaud2257.t1 vs. uniprot
Match: A0A5J4YT12_PORPP (UV excision repair protein RAD23 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT12_PORPP) HSP 1 Score: 195 bits (496), Expect = 2.310e-55 Identity = 132/308 (42.86%), Postives = 168/308 (54.55%), Query Frame = 0
Query: 5 TPAPEPQSTXVASQXXXXXXXXPSGSSSLVVGQEYEQTVRRICEMGFPEAE-VKKALRAAFNNPDRAVDYLFNG-IPESAMPSAPXXXXXXXXXXXXXXXXTGATPNQSEPNAPAAGQQTSTRSAAAATPFNMFEAAGNSPSAGGGG------GSGSLDFLRSVPQFNLMRRLIQSNPAVLPQLLQQLENVNPSLMALIEDNQAEFTRLINEPIPEGEDGGDAAMEQLAQAMAGAXXXREG--------PXXGQILVTEEEHEQLHRLNELAAGFGLERAQVVETWLACDRNENLAANYLVENAEQLR 296
TPA P S A+ P ++ + +G+++E +V+ I MGF + + V++ALRAA+NNPDRAV+YL +G +PE A P GA P S AP + + S PFNMF SA GGG GS SLDFLRSVPQF LMRR+IQSNPA+L LLQQL + +I +NQ EF RLINEP+ E+ AA+EQ G G P I VTEEE Q+ RL E+ G++RAQV+E WLACDRNE +AANYL+EN + LR
Sbjct: 138 TPAANPPSVTTAAAPT------PVSTADIFMGEQFESSVQNIMMMGFSDEQLVRRALRAAYNNPDRAVEYLCSGSVPEVAEPEP------------VPASPAGALPMASTTAAPPSHAPATDNS----QPFNMFAPEPRPESAAGGGXXXXXXGSMSLDFLRSVPQFTLMRRMIQSNPALLSPLLQQLGQAXXXXLQMISENQTEFVRLINEPLTAAEE---AALEQFQDMQGGDLGADFGEGGLPAAPPGTSVIQVTEEERAQIERLEEMVIPMGIDRAQVIEAWLACDRNEEMAANYLLENMDDLR 420
BLAST of Gcaud2257.t1 vs. uniprot
Match: A0A1X6PB96_PORUM (UV excision repair protein RAD23 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PB96_PORUM) HSP 1 Score: 187 bits (475), Expect = 3.220e-52 Identity = 125/294 (42.52%), Postives = 160/294 (54.42%), Query Frame = 0
Query: 28 SGSSSLVVGQEYEQTVRRICEMGFPEAEVKKALRAAFNNPDRAVDYLFNGIPESAMPSAPXXXXXXXXXXXXXXXXTGA-TPNQSEPNAPAAGQQTST---------------------RSAAAATPFNMFEAAGNSPSAGGGGGSGSLDFLRSVPQFNLMRRLIQSNPAVLPQLLQQLENVNPSLMALIEDNQAEFTRLINEPIPEGEDGGDAAMEQL----AQAMAGAXXXREGPXXGQILVTEEEHEQLHRLNELAAGFGLERAQVVETWLACDRNENLAANYLVENAEQL 295
S + LVVG +YE +V ++C+MGF E +VK ALRAAFNNP+RAV+YL NGIP+SA+ AP TGA TP + +AP++G Q ++ TPF MF +G LDFLR +PQFNLMRR+I +N A+L LLQQL NPSL +I NQ EF RL+NEP+ E D M L A +MAG P G I VT EE EQ+ RL L G+ R V++ WLAC+++E LAANYL++NA L
Sbjct: 130 SPGNDLVVGSQYEASVSQLCDMGFAEDQVKAALRAAFNNPERAVEYLSNGIPQSAVEEAPAVVPAAPVGSA-----TGAATPAAMDMDAPSSGTQQASGXXXXXXXXXXXXXXXXXXXXXXXXXXTPFEMFRXXXXXXXXXXX--TGQLDFLRRLPQFNLMRRMIHTNQALLQPLLQQLRQTNPSLFQVINSNQQEFLRLLNEPVSES-DSMSELMRHLSPDEAASMAGGDGAGGAPPPGYITVTPEEAEQIDRLVTLVGPMGVGRNAVLQAWLACEKDEALAANYLLDNAADL 415
BLAST of Gcaud2257.t1 vs. uniprot
Match: A0A7J7C153_TRIWF (Ubiquitin receptor RAD23 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C153_TRIWF) HSP 1 Score: 172 bits (437), Expect = 1.840e-47 Identity = 115/283 (40.64%), Postives = 158/283 (55.83%), Query Frame = 0
Query: 16 ASQXXXXXXXXPSGSSSLVVGQEYEQTVRRICEMG---FPEAEVKKALRAAFNNPDRAVDYLFNGIPESAMPSAPXXXXXXXXXXXXXXXXTGATPNQSEPNAPAAGQQTSTRSAAAATPFNMFEAAGNSPSAGGGGGSGSLDFLRSVPQFNLMRRLIQSNPAVLPQLLQQLENVNPSLMALIEDNQAEFTRLINEPIPEGEDGGDAAMEQLAQAMAGAXXXREGPXXGQILVTEEEHEQLHRLNELAAGFGLERAQVVETWLACDRNENLAANYLVENAEQL 295
A+Q +S+LV G EQT++++ +MG + + V +ALRAA+NNP+RAVDYL++GIPE+A + P TGATP S AP +PFNMF +GGGGG GSLDFLR+ QF +R ++Q+NP +L +LQ+L NP L+ +I+++QAEF +LINEP+ + E GD +Q Q M A I VT E E + RL + G +RA V+E +LACDRNE LAANYL+ENA +
Sbjct: 111 AAQESVLSDTYSQAASNLVAGNSLEQTIQQLMDMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPETAEVAVPVGHNPVSQVTE-----TGATPASSVSQAPNT------------SPFNMFP---QETLSGGGGGDGSLDFLRNNQQFQALRSMVQANPQILQPMLQELGKQNPQLLGMIQEHQAEFLQLINEPLEDSE--GDI-FDQPEQDMPHA-----------INVTPAEQEAIERLEAM----GFDRALVIEAFLACDRNEELAANYLLENAADI 355
BLAST of Gcaud2257.t1 vs. uniprot
Match: A0A7S3UA55_9CHLO (Ubiquitin receptor RAD23 n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UA55_9CHLO) HSP 1 Score: 171 bits (434), Expect = 1.360e-46 Identity = 110/271 (40.59%), Postives = 151/271 (55.72%), Query Frame = 0
Query: 28 SGSSSLVVGQEYEQTVRRICEMGFPEAEVKKALRAAFNNPDRAVDYLFNGIP--ESAMPSAPXXXXXXXXXXXXXXXXTGATPNQSEPNAPAAGQQTSTRSAAAATPFNMFEAAGNSPSAGGGGGS-GSLDFLRSVPQFNLMRRLIQSNPAVLPQLLQQLENVNPSLMALIEDNQAEFTRLINEPIPEGEDGGDAAMEQLAQAMAGAXXXREGPXXGQILVTEEEHEQLHRLNELAAGFGLERAQVVETWLACDRNENLAANYLVENAEQL 295
S +S LV G E E TV+ I EMGFPE +VK+A+RAAFNNPDRAV+YL GIP E+A S P + +E AP G T A PF+MF+ G G+LDFLR QF +R ++Q+NP +L +LQ+L NP L+ LI NQ EF +L+NEP+PEG A+ EQL + + G EG +I +T EE+E + RL + G +RA V++ + ACD++E LAAN+L+E+ +
Sbjct: 162 SAASHLVTGTELEATVKNIVEMGFPEDQVKQAMRAAFNNPDRAVEYLMTGIPATETAAVSNPQPR------------------SATEGGAPEGGAPT-------AQPFDMFQQGGQXXXXXXXXXXXGALDFLRDNQQFQALRTMVQANPQILQPMLQELGKQNPRLLDLINSNQQEFLQLLNEPLPEG-----ASAEQLMEGLMGEGAEGEGHGATEIQITPEENEAIQRLEAM----GFDRALVIQAFFACDKDEALAANFLLEHGNDM 398
BLAST of Gcaud2257.t1 vs. uniprot
Match: A0A2K1JY94_PHYPA (Ubiquitin receptor RAD23 n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JY94_PHYPA) HSP 1 Score: 169 bits (427), Expect = 9.860e-46 Identity = 115/266 (43.23%), Postives = 149/266 (56.02%), Query Frame = 0
Query: 30 SSSLVVGQEYEQTVRRICEMG---FPEAEVKKALRAAFNNPDRAVDYLFNGIPESAMPSAPXXXXXXXXXXXXXXXXTGATPNQSEPNAPAAGQQTSTRSAAAATPFNMFEAAGNSPSAGGGGGSGSLDFLRSVPQFNLMRRLIQSNPAVLPQLLQQLENVNPSLMALIEDNQAEFTRLINEPIPEGEDGGDAAMEQLAQAMAGAXXXREGPXXGQILVTEEEHEQLHRLNELAAGFGLERAQVVETWLACDRNENLAANYLVENA 292
+S+LV G E TV++I +MG + V +ALRAAFNNP+RAV+YL++GIPESA ATP APA G A P ++F P GGGG+G+LDFLR+ PQF +R ++Q+NP +L +LQ+L NP+L+ LI DNQAEF RLINE EG +G + QLA AM + I VT EE E + RL G G ER V+E +LACD+NE LAANYL+E+A
Sbjct: 144 ASNLVAGNVLETTVQQIMDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIPESA------EMRPVGGRSPAVAGVPAATPAAPAQAAPAGGPN--------AAPLDLFPQ--GMPGMAGGGGAGALDFLRNNPQFQALRTMVQANPQILQPMLQELGKQNPALLRLINDNQAEFLRLINEAGAEGAEGD--ILGQLAGAMPQS-----------INVTPEEREAIDRLE----GMGFERTLVIEAFLACDKNEQLAANYLLEHA 376
BLAST of Gcaud2257.t1 vs. uniprot
Match: UPI000B79654D (ubiquitin receptor RAD23b-like isoform X2 n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B79654D) HSP 1 Score: 167 bits (422), Expect = 1.170e-45 Identity = 112/267 (41.95%), Postives = 152/267 (56.93%), Query Frame = 0
Query: 30 SSSLVVGQEYEQTVRRICEMG---FPEAEVKKALRAAFNNPDRAVDYLFNGIPESAMPSAPXXXXXXXXXXXXXXXXTGATPNQSEPNAPAAGQQTSTRSAAAATPFNMFEAAGNSPSAGGGG-GSGSLDFLRSVPQFNLMRRLIQSNPAVLPQLLQQLENVNPSLMALIEDNQAEFTRLINEPIPEGEDGGDAAMEQLAQAMAGAXXXREGPXXGQILVTEEEHEQLHRLNELAAGFGLERAQVVETWLACDRNENLAANYLVENA 292
+S+LV G +QT+++I +MG + + V +ALRAA+NNP+RAVDYL++GIPE+A + P GA P PN +P NMF S +AGGGG G GSLDFLRS QF +R ++QSNP +L +LQ+L NP ++ +I+++ AEF +LINEP+ E E GD +Q+ Q M A I VT E E + RL + G +RA V+E +LACDRNE LAANYL+ENA
Sbjct: 83 ASNLVAGNNLDQTIQQIMDMGGGNWDKETVTRALRAAYNNPERAVDYLYSGIPETAEVAVPVTDFPAGQETEIDA--AGAAPVSGAPNT---------------SPLNMFPQETLSAAAGGGGEGLGSLDFLRSNQQFQALRSMVQSNPQILQPMLQELGKQNPHILRMIQEHHAEFLQLINEPLEESE--GDI-FDQVDQDMPHA-----------INVTPAEQEAIERLEAM----GFDRALVIEAFLACDRNEELAANYLLENA 314
BLAST of Gcaud2257.t1 vs. uniprot
Match: A0A7S4L218_GUITH (UV excision repair protein RAD23 n=2 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4L218_GUITH) HSP 1 Score: 167 bits (422), Expect = 1.440e-44 Identity = 119/271 (43.91%), Postives = 159/271 (58.67%), Query Frame = 0
Query: 30 SSSLVVGQEYEQTVRRICEMGFPEAEVKKALRAAFNNPDRAVDYLFNGIPESAMPSAPXXXXXXXXXXXXXXXXTGATPNQSEPNAPAAGQQTSTRSAAAATPFNMFEAAGNSPSAGGGGGSGSLDFLRSVPQFNLMRRLIQSNPAVLPQLLQQLENVNPSLMALIEDNQAEFTRLINEPI-PEGEDGGDAAMEQLAQAMAGAXXXREGPXXGQ--ILVTEEEHEQLHRLNELAAGFGLERAQVVETWLACDRNENLAANYLVENAEQLRA 297
++++++G++ E +VR IC MGF E+EV++ALR AFNNPDRAV+ L+NG + A XXXXXX GA+P AP+ G FNM A N+ AG GG L+ LR PQF +R +QS P++LP+LL Q+ VNPSL+A I NQAEF R++NEP+ PE +EQ Q M XXX XX I +T EE +Q+ RL +L GL+R V+E WLACD++E LAANYL+ N E + A
Sbjct: 172 NNTILMGEDLEASVREICGMGFAESEVRRALRLAFNNPDRAVEILYNGASDDAQ------QMQNEQPAXXXXXXXGASPE-----APSHGSMP--------LRFNMDALAVNASEAGAGGNQ--LEMLRRDPQFAFVRHCVQSQPSLLPELLLQIGRVNPSLLATINQNQAEFVRIVNEPVSPEELQRSIQFLEQQRQGMXXXXXXXXXXXXXXHTIQLTREELDQVERLEQLVVPMGLDRQAVLEAWLACDKDEQLAANYLLNNLEDILA 421
BLAST of Gcaud2257.t1 vs. uniprot
Match: A0A803QNE3_CANSA (Ubiquitin receptor RAD23 n=6 Tax=Cannabis sativa TaxID=3483 RepID=A0A803QNE3_CANSA) HSP 1 Score: 166 bits (419), Expect = 1.680e-44 Identity = 116/267 (43.45%), Postives = 152/267 (56.93%), Query Frame = 0
Query: 30 SSSLVVGQEYEQTVRRICEMG---FPEAEVKKALRAAFNNPDRAVDYLFNGIPESAMPSAPXXXXXXXXXXXXXXXXTGATPNQSEPNAPAAGQQTSTRSAAAATPFNMFEAAGNSPSAGGGGGS-GSLDFLRSVPQFNLMRRLIQSNPAVLPQLLQQLENVNPSLMALIEDNQAEFTRLINEPIPEGEDGGDAAMEQLAQAMAGAXXXREGPXXGQILVTEEEHEQLHRLNELAAGFGLERAQVVETWLACDRNENLAANYLVENA 292
+S+LV G EQTV+++ +MG + V +ALRAA+NNP+RAVDYL++GIPE+A + P TG T AP +G S +P NMF AG GGG+ G+LDFLR+ PQF +R ++QSNP +L +LQ+L NP L+ LIE+N AEF +LINEP+ EG +G +Q Q M A I VT E E + RL G G +RA V+E +LACDRNE LAANYL+ENA
Sbjct: 156 ASNLVAGSNLEQTVQQLMDMGGGTWDRETVTRALRAAYNNPERAVDYLYSGIPEAAEVAVPAAHFPANQATE-----TGGT------TAPVSGAPNS-------SPLNMFP---QETLAGDGGGALGTLDFLRNNPQFQTLRSMVQSNPQILQPMLQELGKQNPQLLRLIEENHAEFLQLINEPL-EGSEGD--LFDQPDQDMPHA-----------INVTPAEQEAIERLE----GMGFDRALVIEAYLACDRNEELAANYLLENA 383 The following BLAST results are available for this feature:
BLAST of Gcaud2257.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2257.t1 ID=Gcaud2257.t1|Name=Gcaud2257.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=333bpback to top |