Gcaud2244.t2 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2244.t2 vs. uniprot
Match: A0A2V3IIY1_9FLOR (Box C/D snoRNA protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIY1_9FLOR) HSP 1 Score: 432 bits (1110), Expect = 5.860e-140 Identity = 292/665 (43.91%), Postives = 395/665 (59.40%), Query Frame = 0
Query: 1 LEEAKRKKDEASRNRVKN-FYNPYAPKKVPDPIPKHKQRILGREAAKRGIDLRFMPNVFYRHRMNTSRIRPVDYSKTEEKDGATIFEGFNRQFDKIMVWRVDVQFSGTDGGTRLVEIHDLDEEANMNDVLERAVQSLHIRKEPRLNGSVDPYLHYSGLSGNQLNAYIKNEISLGARRAEPSSLPDFPKYKRRKIVDGRVDLGDLELDTRGFILVNTDKTLRESLYSALVVEHPILYVAPKGSQEDKELEQATKSLFDKPEPEADDSVRPPA---SHVVRDEGQDKNDIEEEDADLNETHHSENQV----KSGSAEAHDGKQLEVNPGPENFDRIDDQKGERDFSAVPQSDDKTTEEPESRGVKRKAMVESSDDDESDLSELERNITKRFTPQKKNGGKTGWTRDGKVRIANGKRSASSAVPMPIPRFRSVLPPIHYG----RDETI--------RGERKEGKDHHNEVTGATSEAEESEDENDADEELSGNESTGQHAD-------------KGESE---------------------------QHVDAQI----AVGQKRSLKKSMQEKRRPAKRQRFGDLESIE---------DKQDEKRDGSGAGEKDD--EDGDSKPRSRRQSGVESPPLPFLKVDSVLLDTRIPRRKKIADSNGRETLAC 590
LEEAKRK D+ RNR+ N P A K V DPIP++KQ I+G EAA+RGIDLRFMP F+RHR NTS ++PVDY E + GAT R F++IMVWRVD+ F G GGTRLV+IHDLDE+ NM D+LERAVQ L +RKEPRLNG VD YL Y+G+SG+ LNAY++N+ LG RRAEPS LPD P +KRRK+ DG D +++DTRGFI ++TD TLRESL+ A+VVE+PIL+VAPKGS +D L+ ATKSLF KPE E DD+ PA + V DEGQ D D ++GSA+ G+ NP N + + + A P ++ + + RG KRKA + S D ES++SELE+NI +R TP+K NGGKTG++ +GK+++ K+ S V +P+FRSVLPP+ Y RDE +R++G D +G+ +++ E E N D ++G +S + D G+ + + V ++ + GQKR+ + Q++ RP KR+RF DLE++E +++DE+ S E D+ EDGD++ +++R V SPP PFL+VDSVLL+TRIPRRKK+ D NGRE L C
Sbjct: 72 LEEAKRKHDDVKRNRITNKVARPAAKKNVFDPIPRYKQVIMGEEAAQRGIDLRFMPPHFFRHRNNTSHVKPVDYCG-EGQAGAT-----RRPFERIMVWRVDIHFCGPGGGTRLVQIHDLDEDVNMADLLERAVQKLEMRKEPRLNGDVDQYLLYAGMSGSNLNAYLRNDSDLGRRRAEPSILPDLPSHKRRKLEDGSADPTAMDVDTRGFIPIDTDNTLRESLHGAMVVEYPILFVAPKGSSDDDHLQSATKSLFMKPEREVDDTFPCPALPTADVQADEGQ-------RDCDXXXXXXXXXXXXXXPQAGSAQNTGGRSAVHNPSHSNSN-----SEKVEIEAKPVTNQSMPSDSQVRGQKRKA--DDSGDSESEMSELEKNIVRRLTPRKMNGGKTGYSCEGKLKVVEPKKL--SPVAFSMPKFRSVLPPVGYDKGDVRDEKDVQAGWKDQEADRRKGADFEESESGSENDSAEEEGSN-VDNGVAGEDSEQMNEDFDXXXXXXXXXXXXGDEKDXXXXXXXXXXXXXXXXXXXXXXXXEYEAVSKKLGEDGSPGQKRARHSATQDRPRPLKRRRFEDLEAVELRGEESVAEEREDEQVKASERDEVDEIAEDGDNEKKTQRAPAVSSPPPPFLQVDSVLLETRIPRRKKMPDQNGREPLIC 713
BLAST of Gcaud2244.t2 vs. uniprot
Match: A0A2V3IJ14_9FLOR (Box C/D snoRNA protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ14_9FLOR) HSP 1 Score: 370 bits (951), Expect = 1.070e-117 Identity = 219/450 (48.67%), Postives = 292/450 (64.89%), Query Frame = 0
Query: 1 LEEAKRKKDEASRNRVKN-FYNPYAPKKVPDPIPKHKQRILGREAAKRGIDLRFMPNVFYRHRMNTSRIRPVDYSKTEEKDGATIFEGFNRQFDKIMVWRVDVQFSGTDGGTRLVEIHDLDEEANMNDVLERAVQSLHIRKEPRLNGSVDPYLHYSGLSGNQLNAYIKNEISLGARRAEPSSLPDFPKYKRRKIVDGRVDLGDLELDTRGFILVNTDKTLRESLYSALVVEHPILYVAPKGSQEDKELEQATKSLFDKPEPEADDSVRPPASHVVRDEGQ-DKNDIEEEDADLNETHHSENQV-----KSGSAEAHDGKQLEVNPGPENFDRIDDQKGERDFSAVPQSDDKTTE--EPESRGVKRKAMVESSDDDESDLSELERNITKRFTPQKKNGGKTGWTRDGKVRIANGKRSASSAVPMPIPRFRSVLPPIHYGRDETIRGERKEG 441
LEEAKR+K+ A RNR+ N F + + DPIP++KQRI+G+EAAKRGIDLRFMP+VF RH+ NTS ++PV+YS +++D A R F+KIMVWRVD+ F G +GGTRLV+IH LDEE NM DVLERA+ +L IRKEPRLNG D YL Y+G+SG++L AYI+N+ LG R EPS LPD P++KRRK+ + D ++LDTRGFI ++TDKTLRESL ALVVE+PIL+VAPKGS +D+ L+ ATKSLF KPEPE DD+ PP + D E + +T HS+ + +SG A D P I QK + V + TT+ + ES+G +++ E S D ++ SELE N+T TP+K NGGKTG+TRDGK+R++ ++ S +P+ +P FRS LPP + + T E +G
Sbjct: 72 LEEAKRQKENAKRNRINNKFIHLANMSNLFDPIPRYKQRIMGQEAAKRGIDLRFMPSVFCRHKNNTSHVKPVNYSPQQQRDTA------RRPFEKIMVWRVDLHFCGPNGGTRLVQIHHLDEEVNMADVLERAIHTLEIRKEPRLNGDTDQYLLYAGMSGSKLRAYIRNDTDLGRRETEPSILPDLPRHKRRKLNNTSADPNSMDLDTRGFIPIDTDKTLRESLRGALVVEYPILFVAPKGSADDQHLQNATKSLFAKPEPEVDDTFPPPLPSTTAVKATCGPTDGEHPGIRITDTTHSQTALAGSTYRSGQKSAADS--------PRGSGGIA-QKASGEARRVTGPEVLTTDAVDSESQGREQQRKAEESGDSDTFRSELEANLTGHLTPRKTNGGKTGYTRDGKLRVSESQKP--SPIPLSLPSFRSALPPGDHDDEGTKTQEDVDG 504 The following BLAST results are available for this feature:
BLAST of Gcaud2244.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2244.t2 ID=Gcaud2244.t2|Name=Gcaud2244.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=591bpback to top |