Gcaud2244.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2244.t1 vs. uniprot
Match: A0A2V3IIY1_9FLOR (Box C/D snoRNA protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIY1_9FLOR) HSP 1 Score: 561 bits (1446), Expect = 2.200e-189 Identity = 350/736 (47.55%), Postives = 460/736 (62.50%), Query Frame = 0
Query: 1 MRRQHPCDACGRAGKVQVSQYRCPACLRCSCSLACVKDHKQHYNCSGVRDKTAPVPKRDYDEHNLISDYSLLEEAKRKKDEASRNRVKN-FYNPYAPKKVPDPIPKHKQRILGREAAKRGIDLRFMPNVFYRHRMNTSRIRPVDYSKTEEKDGATIFEGFNRQFDKIMVWRVDVQFSGTDGGTRLVEIHDLDEEANMNDVLERAVQSLHIRKEPRLNGSVDPYLHYSGLSGNQLNAYIKNEISLGARRAEPSSLPDFPKYKRRKIVDGRVDLGDLELDTRGFILVNTDKTLRESLYSALVVEHPILYVAPKGSQEDKELEQATKSLFDKPEPEADDSVRPPA---SHVVRDEGQDKNDIEEEDADLNETHHSENQV----KSGSAEAHDGKQLEVNPGPENFDRIDDQKGERDFSAVPQSDDKTTEEPESRGVKRKAMVESSDDDESDLSELERNITKRFTPQKKNGGKTGWTRDGKVRIANGKRSASSAVPMPIPRFRSVLPPIHYG----RDETI--------RGERKEGKDHHNEVTGATSEAEESEDENDADEELSGNESTGQHAD-------------KGESE---------------------------QHVDAQI----AVGQKRSLKKSMQEKRRPAKRQRFGDLESIE---------DKQDEKRDGSGAGEKDD--EDGDSKPRSRRQSGVESPPLPFLKVDSVLLDTRIPRRKKIADSNGRETLAC 661
MRRQ PCD+C RAGKVQV+QYRCPAC RCSCSLACVKDHK HY C+GVRDK+APVPKRDY+EH +ISDYS+LEEAKRK D+ RNR+ N P A K V DPIP++KQ I+G EAA+RGIDLRFMP F+RHR NTS ++PVDY E + GAT R F++IMVWRVD+ F G GGTRLV+IHDLDE+ NM D+LERAVQ L +RKEPRLNG VD YL Y+G+SG+ LNAY++N+ LG RRAEPS LPD P +KRRK+ DG D +++DTRGFI ++TD TLRESL+ A+VVE+PIL+VAPKGS +D L+ ATKSLF KPE E DD+ PA + V DEGQ D D ++GSA+ G+ NP N + + + A P ++ + + RG KRKA + S D ES++SELE+NI +R TP+K NGGKTG++ +GK+++ K+ S V +P+FRSVLPP+ Y RDE +R++G D +G+ +++ E E N D ++G +S + D G+ + + V ++ + GQKR+ + Q++ RP KR+RF DLE++E +++DE+ S E D+ EDGD++ +++R V SPP PFL+VDSVLL+TRIPRRKK+ D NGRE L C
Sbjct: 1 MRRQMPCDSCARAGKVQVAQYRCPACARCSCSLACVKDHKTHYGCTGVRDKSAPVPKRDYNEHQVISDYSVLEEAKRKHDDVKRNRITNKVARPAAKKNVFDPIPRYKQVIMGEEAAQRGIDLRFMPPHFFRHRNNTSHVKPVDYCG-EGQAGAT-----RRPFERIMVWRVDIHFCGPGGGTRLVQIHDLDEDVNMADLLERAVQKLEMRKEPRLNGDVDQYLLYAGMSGSNLNAYLRNDSDLGRRRAEPSILPDLPSHKRRKLEDGSADPTAMDVDTRGFIPIDTDNTLRESLHGAMVVEYPILFVAPKGSSDDDHLQSATKSLFMKPEREVDDTFPCPALPTADVQADEGQ-------RDCDXXXXXXXXXXXXXXPQAGSAQNTGGRSAVHNPSHSNSN-----SEKVEIEAKPVTNQSMPSDSQVRGQKRKA--DDSGDSESEMSELEKNIVRRLTPRKMNGGKTGYSCEGKLKVVEPKKL--SPVAFSMPKFRSVLPPVGYDKGDVRDEKDVQAGWKDQEADRRKGADFEESESGSENDSAEEEGSN-VDNGVAGEDSEQMNEDFDXXXXXXXXXXXXGDEKDXXXXXXXXXXXXXXXXXXXXXXXXEYEAVSKKLGEDGSPGQKRARHSATQDRPRPLKRRRFEDLEAVELRGEESVAEEREDEQVKASERDEVDEIAEDGDNEKKTQRAPAVSSPPPPFLQVDSVLLETRIPRRKKMPDQNGREPLIC 713
BLAST of Gcaud2244.t1 vs. uniprot
Match: A0A2V3IJ14_9FLOR (Box C/D snoRNA protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ14_9FLOR) HSP 1 Score: 496 bits (1278), Expect = 9.390e-166 Identity = 275/521 (52.78%), Postives = 356/521 (68.33%), Query Frame = 0
Query: 1 MRRQHPCDACGRAGKVQVSQYRCPACLRCSCSLACVKDHKQHYNCSGVRDKTAPVPKRDYDEHNLISDYSLLEEAKRKKDEASRNRVKN-FYNPYAPKKVPDPIPKHKQRILGREAAKRGIDLRFMPNVFYRHRMNTSRIRPVDYSKTEEKDGATIFEGFNRQFDKIMVWRVDVQFSGTDGGTRLVEIHDLDEEANMNDVLERAVQSLHIRKEPRLNGSVDPYLHYSGLSGNQLNAYIKNEISLGARRAEPSSLPDFPKYKRRKIVDGRVDLGDLELDTRGFILVNTDKTLRESLYSALVVEHPILYVAPKGSQEDKELEQATKSLFDKPEPEADDSVRPPASHVVRDEGQ-DKNDIEEEDADLNETHHSENQV-----KSGSAEAHDGKQLEVNPGPENFDRIDDQKGERDFSAVPQSDDKTTE--EPESRGVKRKAMVESSDDDESDLSELERNITKRFTPQKKNGGKTGWTRDGKVRIANGKRSASSAVPMPIPRFRSVLPPIHYGRDETIRGERKEG 512
MRRQ PCD+C R GKVQV+ YRCPAC RCSCSL+CVK HK +YNC+G+RDKTAPVPKR+YDEHNLISDY+LLEEAKR+K+ A RNR+ N F + + DPIP++KQRI+G+EAAKRGIDLRFMP+VF RH+ NTS ++PV+YS +++D A R F+KIMVWRVD+ F G +GGTRLV+IH LDEE NM DVLERA+ +L IRKEPRLNG D YL Y+G+SG++L AYI+N+ LG R EPS LPD P++KRRK+ + D ++LDTRGFI ++TDKTLRESL ALVVE+PIL+VAPKGS +D+ L+ ATKSLF KPEPE DD+ PP + D E + +T HS+ + +SG A D P I QK + V + TT+ + ES+G +++ E S D ++ SELE N+T TP+K NGGKTG+TRDGK+R++ ++ S +P+ +P FRS LPP + + T E +G
Sbjct: 1 MRRQLPCDSCAREGKVQVANYRCPACARCSCSLSCVKSHKANYNCTGIRDKTAPVPKRNYDEHNLISDYALLEEAKRQKENAKRNRINNKFIHLANMSNLFDPIPRYKQRIMGQEAAKRGIDLRFMPSVFCRHKNNTSHVKPVNYSPQQQRDTA------RRPFEKIMVWRVDLHFCGPNGGTRLVQIHHLDEEVNMADVLERAIHTLEIRKEPRLNGDTDQYLLYAGMSGSKLRAYIRNDTDLGRRETEPSILPDLPRHKRRKLNNTSADPNSMDLDTRGFIPIDTDKTLRESLRGALVVEYPILFVAPKGSADDQHLQNATKSLFAKPEPEVDDTFPPPLPSTTAVKATCGPTDGEHPGIRITDTTHSQTALAGSTYRSGQKSAADS--------PRGSGGIA-QKASGEARRVTGPEVLTTDAVDSESQGREQQRKAEESGDSDTFRSELEANLTGHLTPRKTNGGKTGYTRDGKLRVSESQKP--SPIPLSLPSFRSALPPGDHDDEGTKTQEDVDG 504
BLAST of Gcaud2244.t1 vs. uniprot
Match: W5MDM0_LEPOC (Zinc finger HIT-type containing 6 n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5MDM0_LEPOC) HSP 1 Score: 95.5 bits (236), Expect = 5.950e-18 Identity = 53/131 (40.46%), Postives = 75/131 (57.25%), Query Frame = 0
Query: 7 CDACGRAGKVQVSQYRCPACLRCSCSLACVKDHKQHYNCSGVRDKTAPVPKRDYDEHNLISDYSLLEEAKRKKDEASRNRVKNFYNPYAPKKVPDPIPKHKQRILGREAAKRGIDLRFMPNVFYRHRMNTS 137
C+ACG + ++YRCP CLR SCSL+CVK HK CSGVRDKTA VP D+DE NL+ DY LE+A R D A R+ + + P+ + +A + +DL+F+P F + + N++
Sbjct: 32 CEACGS----EEARYRCPRCLRPSCSLSCVKRHKSDSGCSGVRDKTAFVPVADFDEMNLLCDYRFLEDAGRLADSAGRDSL-----------IHRPLSTKNLNFMRNQARRFHLDLKFLPVGFSKRKENST 147
BLAST of Gcaud2244.t1 vs. uniprot
Match: A0A0G2JG05_MOUSE (Box C/D snoRNA protein 1 (Fragment) n=8 Tax=Murinae TaxID=39107 RepID=A0A0G2JG05_MOUSE) HSP 1 Score: 93.6 bits (231), Expect = 7.280e-18 Identity = 61/171 (35.67%), Postives = 85/171 (49.71%), Query Frame = 0
Query: 7 CDACGRAGKVQVSQYRCPACLRCSCSLACVKDHKQHYNCSGVRDKTAPVPKRDYDEHNLISDYSLLEEAKRKKDEASRNRVKNFYNPYAPKKVPDPIPKHKQRI--LGREAAKRGIDLRFMPNVFYRHRMNTSRIRPVDYSKTEEKDGATIFEGFNRQFDKIMVWRVDVQF 175
C+ CG + ++YRCP C+R SCSL CVK HK CSGVRDKTA V + + E NL+SDY LE+ R D+ SR+ PK K+ + + A K+GI LR +PN F ++ K+ +T+F+ +QF W V +QF
Sbjct: 67 CETCG----TEEAKYRCPRCMRFSCSLPCVKKHKADLTCSGVRDKTAYVSLQQFTEMNLLSDYRFLEDVARTADKVSRDTFLKR-------------PKRKKYLFFMKNRARKQGIYLRLLPNGF-----------------SKRKENSTVFDHRKQQF----CWHVKLQF 199
BLAST of Gcaud2244.t1 vs. uniprot
Match: A0A3B3RC87_9TELE (HIT-type domain-containing protein n=3 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3RC87_9TELE) HSP 1 Score: 92.8 bits (229), Expect = 8.400e-18 Identity = 56/134 (41.79%), Postives = 76/134 (56.72%), Query Frame = 0
Query: 7 CDACGRAGKVQVSQYRCPACLRCSCSLACVKDHKQHYNCSGVRDKTAPVPKRDYDEHNLISDYSLLEEAKRKKDEASRNRVKNFYNPYAPKKVPDPIPKHKQ---RILGREAAKRGIDLRFMPNVFYRHRMNTS 137
C+ACG + ++YRCPACL+ SCSL CVK HK C+GVRDKTA VP +DE L+SDY LE++ R D +R+R + +P+ K RIL A + + LR +PN F + R NT+
Sbjct: 13 CEACG----AEEAKYRCPACLKHSCSLPCVKKHKSDSGCTGVRDKTAFVPLSCFDEMTLLSDYRFLEDSGRLADSITRDRHR--------------LPQQKNQKARILRLGAHRLNLQLRLLPNGFTKSRENTT 128
BLAST of Gcaud2244.t1 vs. uniprot
Match: A0A452FCA6_CAPHI (Zinc finger HIT-type containing 6 n=13 Tax=Pecora TaxID=35500 RepID=A0A452FCA6_CAPHI) HSP 1 Score: 97.4 bits (241), Expect = 9.340e-18 Identity = 61/169 (36.09%), Postives = 82/169 (48.52%), Query Frame = 0
Query: 7 CDACGRAGKVQVSQYRCPACLRCSCSLACVKDHKQHYNCSGVRDKTAPVPKRDYDEHNLISDYSLLEEAKRKKDEASRNRVKNFYNPYAPKKVPDPIPKHKQRILGREAAKRGIDLRFMPNVFYRHRMNTSRIRPVDYSKTEEKDGATIFEGFNRQFDKIMVWRVDVQF 175
C+ CG + ++YRCP CLR SCSL CVK HK C+GVRDKTA V + + E NL+SDY LE+ R D SR+ + PI + A K+GI+L+ +PN F T+ K+ +T F+ RQF W V +QF
Sbjct: 210 CETCG----TEEAKYRCPRCLRYSCSLPCVKKHKAELTCNGVRDKTAYVSIQQFTEMNLLSDYRFLEDVARTADHISRDAF-----------LKRPISNKHMYFMKNRARKQGINLKLLPNGF-----------------TKRKENSTFFDKKKRQF----CWHVKLQF 342
BLAST of Gcaud2244.t1 vs. uniprot
Match: A0A8C9VX21_SCLFO (Zinc finger HIT-type containing 6 n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9VX21_SCLFO) HSP 1 Score: 94.4 bits (233), Expect = 1.130e-17 Identity = 56/134 (41.79%), Postives = 77/134 (57.46%), Query Frame = 0
Query: 7 CDACGRAGKVQVSQYRCPACLRCSCSLACVKDHKQHYNCSGVRDKTAPVPKRDYDEHNLISDYSLLEEAKRKKDEASRNRVKNFYNPYAPKKVPDPIPKH---KQRILGREAAKRGIDLRFMPNVFYRHRMNTS 137
C+ACG + ++YRCPACL+ SCSL CVK HK C+G RDKTA P +DE N++SDY LE+ R D SR+ F + +P H K RI+ R A K ++L+F+PN F + R N++
Sbjct: 36 CEACG----TEEAKYRCPACLKHSCSLFCVKKHKSESGCTGARDKTAFAPISKFDEMNMLSDYRFLEDTARVADSVSRD----FGH----------LPHHRSQKVRIMKRAAYKFSMELKFLPNGFTKRRENST 151
BLAST of Gcaud2244.t1 vs. uniprot
Match: A0A6I9I7W7_VICPA (box C/D snoRNA protein 1 isoform X2 n=9 Tax=Camelidae TaxID=9835 RepID=A0A6I9I7W7_VICPA) HSP 1 Score: 97.1 bits (240), Expect = 1.400e-17 Identity = 60/169 (35.50%), Postives = 83/169 (49.11%), Query Frame = 0
Query: 7 CDACGRAGKVQVSQYRCPACLRCSCSLACVKDHKQHYNCSGVRDKTAPVPKRDYDEHNLISDYSLLEEAKRKKDEASRNRVKNFYNPYAPKKVPDPIPKHKQRILGREAAKRGIDLRFMPNVFYRHRMNTSRIRPVDYSKTEEKDGATIFEGFNRQFDKIMVWRVDVQF 175
C+ CG + ++YRCP C+R SCSL CVK HK C+GVRDKTA V +++ E NL+SDY LE+ R D SR+ + PI + A K+GI+L+ +PN F T+ K+ +T F+ RQF W V +QF
Sbjct: 226 CETCG----TEEAKYRCPRCMRYSCSLPCVKKHKAELTCNGVRDKTAYVSIQEFTEMNLLSDYRFLEDVARTADHISRDAF-----------LRRPISNKHMYFMKNRARKQGINLKLLPNGF-----------------TKRKENSTFFDKKKRQF----CWHVKLQF 358
BLAST of Gcaud2244.t1 vs. uniprot
Match: W5PY66_SHEEP (Zinc finger HIT-type containing 6 n=4 Tax=Bovidae TaxID=9895 RepID=W5PY66_SHEEP) HSP 1 Score: 97.4 bits (241), Expect = 1.790e-17 Identity = 61/169 (36.09%), Postives = 82/169 (48.52%), Query Frame = 0
Query: 7 CDACGRAGKVQVSQYRCPACLRCSCSLACVKDHKQHYNCSGVRDKTAPVPKRDYDEHNLISDYSLLEEAKRKKDEASRNRVKNFYNPYAPKKVPDPIPKHKQRILGREAAKRGIDLRFMPNVFYRHRMNTSRIRPVDYSKTEEKDGATIFEGFNRQFDKIMVWRVDVQF 175
C+ CG + ++YRCP CLR SCSL CVK HK C+GVRDKTA V + + E NL+SDY LE+ R D SR+ + PI + A K+GI+L+ +PN F T+ K+ +T F+ RQF W V +QF
Sbjct: 335 CETCG----TEEAKYRCPRCLRYSCSLPCVKKHKAELTCNGVRDKTAYVSIQQFTEMNLLSDYRFLEDVARTADHISRDAF-----------LKRPISNKHMYFMKNRARKQGINLKLLPNGF-----------------TKRKENSTFFDKKKRQF----CWHVKLQF 467
BLAST of Gcaud2244.t1 vs. uniprot
Match: A0A8C2PFB6_CAPHI (Zinc finger HIT-type containing 6 n=1 Tax=Capra hircus TaxID=9925 RepID=A0A8C2PFB6_CAPHI) HSP 1 Score: 95.9 bits (237), Expect = 2.310e-17 Identity = 60/169 (35.50%), Postives = 81/169 (47.93%), Query Frame = 0
Query: 7 CDACGRAGKVQVSQYRCPACLRCSCSLACVKDHKQHYNCSGVRDKTAPVPKRDYDEHNLISDYSLLEEAKRKKDEASRNRVKNFYNPYAPKKVPDPIPKHKQRILGREAAKRGIDLRFMPNVFYRHRMNTSRIRPVDYSKTEEKDGATIFEGFNRQFDKIMVWRVDVQF 175
C+ CG + ++YRCP CLR SCSL CVK HK C+GVRDKT V + + E NL+SDY LE+ R D SR+ + PI + A K+GI+L+ +PN F T+ K+ +T F+ RQF W V +QF
Sbjct: 181 CETCG----TEEAKYRCPRCLRYSCSLPCVKKHKAELTCNGVRDKTVYVSIQQFTEMNLLSDYRFLEDVARTADHISRDAF-----------LKRPISNKHMYFMKNRARKQGINLKLLPNGF-----------------TKRKENSTFFDKKKRQF----CWHVKLQF 313 The following BLAST results are available for this feature:
BLAST of Gcaud2244.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2244.t1 ID=Gcaud2244.t1|Name=Gcaud2244.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=662bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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