Gcaud2238.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2238.t1
Unique NameGcaud2238.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length228
Homology
BLAST of Gcaud2238.t1 vs. uniprot
Match: A0A2V3ILH5_9FLOR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILH5_9FLOR)

HSP 1 Score: 291 bits (745), Expect = 1.490e-97
Identity = 138/198 (69.70%), Postives = 159/198 (80.30%), Query Frame = 0
Query:   30 MALLRFVLPFAALFFAACARQSVTVTDHVFFDMSIGGESVGRMTFALFGETVPKTAKNFKHLALHTEGYGYKNSIFHRIIPGFMAQGGDFEKSDGTGGKSIYGAKFDDENFDLRHVGRGVLSMANAGPNTNGAQFFITFKDTPWLNGRHVVFGKLISGHEVLDRLEGLRTGAMDRPKEEVTVVDCGSIDVDSPYKMDL 227
            M  +R +L +A +F       +  VTD  FFD+ IG E VGRM F LFGE VPKT +NFKHLALHT+G+GYK SIFHRIIPGFMAQGGDFE SDGTGGKSIYGAKFDDENF LRH  RG+LSMANAGPNTNGAQFF+ FK+ PWL+GRHVVFGKL  GH VL+RLE ++T   DRPK+ V VVDCGSIDVD+PY+++L
Sbjct:    1 MNSIRSLLFYACVFTLCSTIVAEKVTDKAFFDVEIGDEPVGRMVFELFGEAVPKTVENFKHLALHTKGFGYKGSIFHRIIPGFMAQGGDFENSDGTGGKSIYGAKFDDENFKLRHTSRGLLSMANAGPNTNGAQFFVLFKEAPWLDGRHVVFGKLSEGHNVLERLENVQTSRSDRPKKAVVVVDCGSIDVDTPYEVNL 198          
BLAST of Gcaud2238.t1 vs. uniprot
Match: Q7XZ39_GRIJA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ39_GRIJA)

HSP 1 Score: 263 bits (672), Expect = 1.900e-86
Identity = 123/192 (64.06%), Postives = 148/192 (77.08%), Query Frame = 0
Query:   36 VLPFAALFFAACARQSVTVTDHVFFDMSIGGESVGRMTFALFGETVPKTAKNFKHLALHTEGYGYKNSIFHRIIPGFMAQGGDFEKSDGTGGKSIYGAKFDDENFDLRHVGRGVLSMANAGPNTNGAQFFITFKDTPWLNGRHVVFGKLISGHEVLDRLEGLRTGAMDRPKEEVTVVDCGSIDVDSPYKMDL 227
            V+ F AL   A A+    VT  VFFD+S+G +   R+ FALFG+TVPKT KNF  L+LHTEG+GYK S FHR+I GFMAQGGDF   DGTGGKSIYG KF DENF ++H  RG LSMANAGP+TNG+QFFI FKDTPWL+GRHVVFGK++ G  VLD +E   TG+ DRPK++V +VDCG+IDVD PY ++L
Sbjct:    7 VIAFIALLSVASAKTGPLVTHKVFFDISVGDKPPRRIVFALFGKTVPKTVKNFVDLSLHTEGFGYKGSKFHRVISGFMAQGGDFTNGDGTGGKSIYGEKFGDENFKIKHESRGFLSMANAGPDTNGSQFFILFKDTPWLDGRHVVFGKMVDGSAVLDDMENAPTGSNDRPKDDVKIVDCGTIDVDEPYNIEL 198          
BLAST of Gcaud2238.t1 vs. uniprot
Match: R7QGS4_CHOCR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGS4_CHOCR)

HSP 1 Score: 258 bits (659), Expect = 1.740e-84
Identity = 120/189 (63.49%), Postives = 146/189 (77.25%), Query Frame = 0
Query:   39 FAALFFAACARQSVTVTDHVFFDMSIGGESVGRMTFALFGETVPKTAKNFKHLALHTEGYGYKNSIFHRIIPGFMAQGGDFEKSDGTGGKSIYGAKFDDENFDLRHVGRGVLSMANAGPNTNGAQFFITFKDTPWLNGRHVVFGKLISGHEVLDRLEGLRTGAMDRPKEEVTVVDCGSIDVDSPYKMDL 227
            F  LF  A A+    VTD VFFD++IGG+  GR+ F LFG TVPKT  NFK LALH +G+GYK+SIFHR+I GFM +G DFE  +GTGGKSIYG KFDDEN  ++H GRG LSMANAGP+TNG+QFFI FKDTPWL+GRHVVFG +I G  VLD +E +RT + D P+EE+ + DCGSIDVD PY +++
Sbjct:   10 FGVLFSLAAAKVGPKVTDKVFFDVTIGGKPAGRLVFGLFGATVPKTVDNFKGLALHVKGFGYKSSIFHRVIRGFMVRG-DFENQNGTGGKSIYGEKFDDENSYVQHTGRGFLSMANAGPSTNGSQFFILFKDTPWLDGRHVVFGTVIEGQNVLDAIENVRTNSRDLPQEEIAIADCGSIDVDEPYNLEV 197          
BLAST of Gcaud2238.t1 vs. uniprot
Match: A0A1W5LAA2_9RHOD (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Neoporphyra seriata TaxID=79731 RepID=A0A1W5LAA2_9RHOD)

HSP 1 Score: 241 bits (615), Expect = 1.170e-77
Identity = 109/183 (59.56%), Postives = 137/183 (74.86%), Query Frame = 0
Query:   45 AACARQSVTVTDHVFFDMSIGGESVGRMTFALFGETVPKTAKNFKHLALHTEGYGYKNSIFHRIIPGFMAQGGDFEKSDGTGGKSIYGAKFDDENFDLRHVGRGVLSMANAGPNTNGAQFFITFKDTPWLNGRHVVFGKLISGHEVLDRLEGLRTGAMDRPKEEVTVVDCGSIDVDSPYKMDL 227
            A  A++   VT HVFFD+SIGGE+ GR+   LFG T PKTA NF  LALH++G+GYK S FHR+IPGFM QGGDF   DGTGGKSIYG KFDDENF ++H    +LSMANAGP TNG+QFFIT   T WL+GRHVVFG ++SG +V+ ++E   TGA D+PK+ V + D GS+D+  PY +++
Sbjct:   25 AVAAKKGPKVTSHVFFDVSIGGEAAGRIVLGLFGSTTPKTADNFLQLALHSKGFGYKGSSFHRVIPGFMLQGGDFTNGDGTGGKSIYGEKFDDENFKIKHTKAYLLSMANAGPGTNGSQFFITLAPTAWLDGRHVVFGAVVSGEDVVRKIEANPTGASDKPKKAVVIEDSGSVDLPEPYNIEM 207          
BLAST of Gcaud2238.t1 vs. uniprot
Match: A0A1X6P403_PORUM (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P403_PORUM)

HSP 1 Score: 232 bits (592), Expect = 3.640e-74
Identity = 105/177 (59.32%), Postives = 134/177 (75.71%), Query Frame = 0
Query:   45 AACARQSVTVTDHVFFDMSIGGESVGRMTFALFGETVPKTAKNFKHLALHTEGYGYKNSIFHRIIPGFMAQGGDFEKSDGTGGKSIYGAKFDDENFDLRHVGRGVLSMANAGPNTNGAQFFITFKDTPWLNGRHVVFGKLISGHEVLDRLEGLRTGAMDRPKEEVTVVDCGSIDVDS 221
            A  A++   VT HVFFD+SIGGE  GR+   LFG T PKTA+NF  LA+HT+G+GYK S FHR+IPGFM QGGDF   DGTGGKSIYG KFDDENF ++H    +LSMANAGP TNG+QFFIT   T WL+GRHVVFG +++G +V+ ++E   TG+ D+PK+ V + D GS++++S
Sbjct:   24 AVAAKKGPKVTAHVFFDVSIGGEQAGRIVLGLFGSTTPKTAENFMQLAMHTKGFGYKKSGFHRVIPGFMIQGGDFTNGDGTGGKSIYGEKFDDENFKIKHTKSYLLSMANAGPGTNGSQFFITLAPTAWLDGRHVVFGAVVAGEDVVRKIESNPTGSGDKPKQAVVIEDSGSVELES 200          
BLAST of Gcaud2238.t1 vs. uniprot
Match: U5EZA4_9DIPT (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Corethrella appendiculata TaxID=1370023 RepID=U5EZA4_9DIPT)

HSP 1 Score: 231 bits (590), Expect = 6.010e-74
Identity = 112/195 (57.44%), Postives = 141/195 (72.31%), Query Frame = 0
Query:   33 LRFVLPFAALFFAACARQSVTVTDHVFFDMSIGGESVGRMTFALFGETVPKTAKNFKHLALHTE-GYGYKNSIFHRIIPGFMAQGGDFEKSDGTGGKSIYGAKFDDENFDLRHVGRGVLSMANAGPNTNGAQFFITFKDTPWLNGRHVVFGKLISGHEVLDRLEGLRTGAMDRPKEEVTVVDCGSIDVDSPYKMD 226
            ++F++  +AL   A A     VTD VFFD++IGG+S GR+   LFG TVPKTA+NFK LA  T  G GYK S FHR+I  FM QGGDF K DGTGG+SIYG +F+DENF L+H G G LSMANAG +TNG+QFFIT K T WL+GRHVVFGK++SG +V+ ++E  +T   DRP +   + DCGSI VD P+ +D
Sbjct:    1 MKFLIILSALIVGALANAGPKVTDKVFFDITIGGKSAGRIVIGLFGGTVPKTARNFKELAEKTVIGEGYKGSQFHRVIKDFMIQGGDFTKGDGTGGRSIYGERFEDENFKLKHYGAGWLSMANAGKDTNGSQFFITTKQTSWLDGRHVVFGKVLSGMDVVRKIENSKTDGRDRPVDAAVISDCGSIPVDEPFAVD 195          
BLAST of Gcaud2238.t1 vs. uniprot
Match: A0A6P8HAF1_ACTTE (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HAF1_ACTTE)

HSP 1 Score: 231 bits (589), Expect = 9.420e-74
Identity = 109/196 (55.61%), Postives = 140/196 (71.43%), Query Frame = 0
Query:   30 MALLRFVLPFAALFFAACARQSVTVTDHVFFDMSIGGESVGRMTFALFGETVPKTAKNFKHLALHTEGYGYKNSIFHRIIPGFMAQGGDFEKSDGTGGKSIYGAKFDDENFDLRHVGRGVLSMANAGPNTNGAQFFITFKDTPWLNGRHVVFGKLISGHEVLDRLEGLRTGAMDRPKEEVTVVDCGSIDVDSPYKM 225
            M  L F+  FA    A  A +   VT  VFFD++IGG+  GR+   LFG+TVPKTA+NF  LA H +G+GYK S+FHR+I  FM QGGDF + DGTGGKSIYG KF DENF L+H G G LSMANAG +TNG+QFFIT   TPWL+GRHVVFGK++SG +V+ ++E  +T   DRP  +V + D GS+ V+ P+++
Sbjct:    1 MNFLAFLSVFALFLVAVNASKGTVVTKKVFFDITIGGKEAGRIVIGLFGKTVPKTAENFYQLATHEKGFGYKGSVFHRVIQDFMIQGGDFTRGDGTGGKSIYGEKFADENFKLQHYGAGWLSMANAGKDTNGSQFFITTVKTPWLDGRHVVFGKVLSGMDVVRKIEKSKTNHSDRPTSDVKIADSGSLPVEKPFEV 196          
BLAST of Gcaud2238.t1 vs. uniprot
Match: UPI0009E2F35A (peptidyl-prolyl cis-trans isomerase B-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E2F35A)

HSP 1 Score: 229 bits (584), Expect = 4.900e-73
Identity = 111/196 (56.63%), Postives = 139/196 (70.92%), Query Frame = 0
Query:   30 MALLRFVLPFAALFFAACARQ--SVTVTDHVFFDMSIGGESVGRMTFALFGETVPKTAKNFKHLALHTEGYGYKNSIFHRIIPGFMAQGGDFEKSDGTGGKSIYGAKFDDENFDLRHVGRGVLSMANAGPNTNGAQFFITFKDTPWLNGRHVVFGKLISGHEVLDRLEGLRTGAMDRPKEEVTVVDCGSIDVDSPY 223
            M+ L +++  A   F   A    +V VT+ VFFD+ IGGE  GR+   LFG TVPKTAKNF  LA H +G+GYK SIFHR+I GFM QGGDF   DGTGGKSIYG +F DENF L H G G LSMANAG +TNG+QFFIT   T WL+GRHVVFGK++ G +V+ ++E  +T + DRP +EV + DCGSI ++ P+
Sbjct:    1 MSSLLYLVVMACACFGVKANSGDTVDVTEKVFFDVEIGGEKAGRVVIGLFGTTVPKTAKNFYDLATHEKGFGYKGSIFHRVIEGFMIQGGDFTNRDGTGGKSIYGERFPDENFKLSHYGSGWLSMANAGKDTNGSQFFITTVKTSWLDGRHVVFGKVLEGMDVVTKIEKTKTDSRDRPIKEVKIADCGSIHLEKPF 196          
BLAST of Gcaud2238.t1 vs. uniprot
Match: UPI000A2A8A8F (peptidyl-prolyl cis-trans isomerase B n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8A8F)

HSP 1 Score: 229 bits (583), Expect = 7.180e-73
Identity = 108/192 (56.25%), Postives = 137/192 (71.35%), Query Frame = 0
Query:   35 FVLPFAALFFAACARQSVTVTDHVFFDMSIGGESVGRMTFALFGETVPKTAKNFKHLALHTEGYGYKNSIFHRIIPGFMAQGGDFEKSDGTGGKSIYGAKFDDENFDLRHVGRGVLSMANAGPNTNGAQFFITFKDTPWLNGRHVVFGKLISGHEVLDRLEGLRTGAMDRPKEEVTVVDCGSIDVDSPYKMD 226
            F+  FA    A CA +   VT  VFFD +IG E  GR+   LFG+ VPKTAKNF  LA   +G+GYK S FHR+I  FM QGGDF   DGTGGKS+YG +F DENF L H G G LSMANAG +TNG+QFFIT   TPWL+GRHVVFGK++SG +V+ ++E  +TGA D+P ++VT+ DCGS+ V+ P+ ++
Sbjct:    6 FLSVFALFVAAVCATKDPLVTKKVFFDXTIGKEKAGRIEIGLFGKVVPKTAKNFYELATGEKGFGYKGSKFHRVIQDFMIQGGDFTNGDGTGGKSVYGDRFPDENFKLSHYGAGWLSMANAGXDTNGSQFFITTVKTPWLDGRHVVFGKVLSGMDVVRKIEKTQTGANDKPTKDVTIADCGSLPVEKPFSVE 197          
BLAST of Gcaud2238.t1 vs. uniprot
Match: B3RS46_TRIAD (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Trichoplax TaxID=10227 RepID=B3RS46_TRIAD)

HSP 1 Score: 228 bits (582), Expect = 1.020e-72
Identity = 108/197 (54.82%), Postives = 138/197 (70.05%), Query Frame = 0
Query:   30 MALLRFVLPFAALFFAACARQSVTVTDHVFFDMSIGGESVGRMTFALFGETVPKTAKNFKHLALHTEGYGYKNSIFHRIIPGFMAQGGDFEKSDGTGGKSIYGAKFDDENFDLRHVGRGVLSMANAGPNTNGAQFFITFKDTPWLNGRHVVFGKLISGHEVLDRLEGLRTGAMDRPKEEVTVVDCGSIDVDSPYKMD 226
            + LL  V+     F ++ A++   VT  VFFD++IGGE  GR+   LFG TVPKT  NF  LA   +G+GYK S+FHR+I  FM QGGDF   DGTGGKSIYG KFDDENF L+H G G LSMANAG +TNG+QFFIT   TPWL+GRHVVFGK++ G +++ ++E  +T   DRP++EV + DCG I VD  + +D
Sbjct:    4 IVLLLVVVTIFTFFNSSQAKKGPKVTKKVFFDITIGGEKAGRIEIGLFGSTVPKTVTNFVALATGEKGFGYKGSVFHRVIKDFMIQGGDFTNGDGTGGKSIYGRKFDDENFKLKHAGPGYLSMANAGRHTNGSQFFITTVRTPWLDGRHVVFGKVLDGMDIVRKIENSKTSHNDRPEKEVKIADCGEITVDQSFSID 200          
The following BLAST results are available for this feature:
BLAST of Gcaud2238.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILH5_9FLOR1.490e-9769.70Peptidyl-prolyl cis-trans isomerase n=1 Tax=Gracil... [more]
Q7XZ39_GRIJA1.900e-8664.06Peptidyl-prolyl cis-trans isomerase n=1 Tax=Griffi... [more]
R7QGS4_CHOCR1.740e-8463.49Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chondr... [more]
A0A1W5LAA2_9RHOD1.170e-7759.56Peptidyl-prolyl cis-trans isomerase n=1 Tax=Neopor... [more]
A0A1X6P403_PORUM3.640e-7459.32Peptidyl-prolyl cis-trans isomerase n=1 Tax=Porphy... [more]
U5EZA4_9DIPT6.010e-7457.44Peptidyl-prolyl cis-trans isomerase n=1 Tax=Coreth... [more]
A0A6P8HAF1_ACTTE9.420e-7455.61Peptidyl-prolyl cis-trans isomerase n=1 Tax=Actini... [more]
UPI0009E2F35A4.900e-7356.63peptidyl-prolyl cis-trans isomerase B-like n=1 Tax... [more]
UPI000A2A8A8F7.180e-7356.25peptidyl-prolyl cis-trans isomerase B n=1 Tax=Exai... [more]
B3RS46_TRIAD1.020e-7254.82Peptidyl-prolyl cis-trans isomerase n=2 Tax=Tricho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPRINTSPR00153CSAPPISMRASEcoord: 105..117
score: 76.39
coord: 148..163
score: 78.2
coord: 176..191
score: 50.05
coord: 163..175
score: 56.41
coord: 76..91
score: 54.7
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 60..215
e-value: 1.2E-45
score: 155.6
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 59..216
score: 43.147018
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 45..226
e-value: 4.3E-75
score: 253.4
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 52..220
NoneNo IPR availablePANTHERPTHR11071PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 48..220
NoneNo IPR availablePANTHERPTHR11071:SF420PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTICcoord: 48..220
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
IPR020892Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved sitePROSITEPS00170CSA_PPIASE_1coord: 100..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2494_length_5473_cov_3.771089contigNODE_2494_length_5473_cov_3.771089:1417..2484 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2238.t1Gcaud2238.t1Gracilaria caudata M_176_S67 malemRNANODE_2494_length_5473_cov_3.771089 1417..2484 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2238.t1 ID=Gcaud2238.t1|Name=Gcaud2238.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=228bp
AIHSHRCEVQLPKRSSSTPSSTTHRFSTNMALLRFVLPFAALFFAACARQ
SVTVTDHVFFDMSIGGESVGRMTFALFGETVPKTAKNFKHLALHTEGYGY
KNSIFHRIIPGFMAQGGDFEKSDGTGGKSIYGAKFDDENFDLRHVGRGVL
SMANAGPNTNGAQFFITFKDTPWLNGRHVVFGKLISGHEVLDRLEGLRTG
AMDRPKEEVTVVDCGSIDVDSPYKMDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom_sf
IPR020892Cyclophilin-type_PPIase_CS