Gcaud2212.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2212.t1
Unique NameGcaud2212.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length265
Homology
BLAST of Gcaud2212.t1 vs. uniprot
Match: A0A2V3IN13_9FLOR (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN13_9FLOR)

HSP 1 Score: 480 bits (1235), Expect = 1.570e-170
Identity = 243/264 (92.05%), Postives = 252/264 (95.45%), Query Frame = 0
Query:    1 MTAFVSSFAGAAVRPQFRQNALQTAVPEHTRRPAVARRVRLTPRAMQSAGGGTMYDGARAGPPPDLPSLLLHNRIIYLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSSADGQNVGFETEAFAVVDTMNYVKMPVHTICVGQAFGMAGMLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNRRQAFEIIAERSGQPVEQIEKDAMRTKYFTPQEAVDYGLIDKVLLSEKDLPQKAPTFLSALDK 264
            MTAFVSSFAGA+VRPQF+   LQ   P+ ++R   ARRVR+TPRAMQSAGGGTMYDGARAGPPPDLPSLLLHNRI+YLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSSADGQNVGFETEAFAV DTMNYVKMPVHTICVGQAFGMA MLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNRRQAF+IIAERSGQPVEQIEKDAMRTKYFTPQEAVDYGLIDKVLLSEK+LPQKAPTFLSALDK
Sbjct:    1 MTAFVSSFAGASVRPQFQAQGLQQTAPKSSKRSVAARRVRVTPRAMQSAGGGTMYDGARAGPPPDLPSLLLHNRIVYLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSSADGQNVGFETEAFAVADTMNYVKMPVHTICVGQAFGMAAMLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNRRQAFDIIAERSGQPVEQIEKDAMRTKYFTPQEAVDYGLIDKVLLSEKELPQKAPTFLSALDK 264          
BLAST of Gcaud2212.t1 vs. uniprot
Match: R7QEQ2_CHOCR (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEQ2_CHOCR)

HSP 1 Score: 442 bits (1136), Expect = 2.280e-155
Identity = 230/264 (87.12%), Postives = 239/264 (90.53%), Query Frame = 0
Query:    1 MTAFVSSFAGAAVRPQFRQNALQTAVPEHTRRPAVARRVRLTPRAMQSAGGGTMYDGARAGPPPDLPSLLLHNRIIYLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSSADGQNVGFETEAFAVVDTMNYVKMPVHTICVGQAFGMAGMLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNRRQAFEIIAERSGQPVEQIEKDAMRTKYFTPQEAVDYGLIDKVLLSEKDLPQKAPTFLSALDK 264
            M AFVSSFAGAAVRPQ     L +     +RRPA   R R TPRAMQSAGGGTMYDGARAGPPPDLPSLLLHNRI+YLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSS DGQNVGFETEAFAV DTMNYVKMPVHTICVGQAFGMA MLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNR+QAF IIAERSGQP+EQ+EKDA RTKYF+P EA DYG+IDKVL SEKDLPQ+APTFLSALDK
Sbjct:    8 MPAFVSSFAGAAVRPQLHGAGLSSRRAP-SRRPASTSR-RATPRAMQSAGGGTMYDGARAGPPPDLPSLLLHNRIVYLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSSPDGQNVGFETEAFAVADTMNYVKMPVHTICVGQAFGMAAMLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNRKQAFGIIAERSGQPLEQVEKDATRTKYFSPAEAADYGIIDKVLQSEKDLPQRAPTFLSALDK 269          
BLAST of Gcaud2212.t1 vs. uniprot
Match: A0A1X6P675_PORUM (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P675_PORUM)

HSP 1 Score: 354 bits (909), Expect = 8.780e-121
Identity = 174/211 (82.46%), Postives = 193/211 (91.47%), Query Frame = 0
Query:   54 MYDGARAGPPPDLPSLLLHNRIIYLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSSADGQNVGFETEAFAVVDTMNYVKMPVHTICVGQAFGMAGMLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNRRQAFEIIAERSGQPVEQIEKDAMRTKYFTPQEAVDYGLIDKVLLSEKDLPQKAPTFLSALDK 264
            M+DG R GPPPDLPSLLLHNRIIYLGM LV AVTELIIAEFLYLQYEDA KP+ +YINSTGTSS DGQNVGFETEAFA+ DTM+YVK PVHTICVGQAFGMA MLLASGEK HR+ALPNATIMLHQPRGSA+GQA+DIAIKA+EVL+NR+QAF+I+A+ SGQP+EQ+E DA RTKY +PQEA +YGLIDKVL SEKDLP KAP+FLSALDK
Sbjct:   61 MHDGVRLGPPPDLPSLLLHNRIIYLGMPLVAAVTELIIAEFLYLQYEDAEKPITLYINSTGTSSPDGQNVGFETEAFAIADTMSYVKPPVHTICVGQAFGMAAMLLASGEKGHRSALPNATIMLHQPRGSARGQAADIAIKAREVLHNRKQAFQIMADASGQPLEQVEADANRTKYLSPQEAKEYGLIDKVLTSEKDLPSKAPSFLSALDK 271          
BLAST of Gcaud2212.t1 vs. uniprot
Match: A0A7S3EA22_9RHOD (ATP-dependent Clp protease proteolytic subunit n=6 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EA22_9RHOD)

HSP 1 Score: 346 bits (888), Expect = 7.330e-118
Identity = 185/260 (71.15%), Postives = 211/260 (81.15%), Query Frame = 0
Query:    3 AFVSSFAGAAVRPQFRQNALQTAVPEHTRRPAVARRVRLTPRAMQSAGGGTMYDGARAGPPPDLPSLLLHNRIIYLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSSADGQNVGFETEAFAVVDTMNYVKMPVHTICVGQAFGMAGMLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNRRQAFEIIAERSGQPVEQIEKDAMRTKYFTPQEAVDYGLIDKVLLSEKDLPQKAPTFLSAL 262
            AFVSSF G  VR   R N L     E     AVA R + T R MQS  G + Y+GAR GPPPDLPSLLLHNRIIYLGM LVPAVTELIIAE LYLQY++A KPV+MYINSTGTSSA+GQNVGFETEAFA+VDTMNYVK P+HTIC+GQAFGMA MLL +GEK HRAALPN+TIMLHQPRG AQGQA+DIAIKA+EVL+NR+QAF+IIA+  GQ +EQ++ DA RTKY T  EA +YGLIDKVL S KDLP +AP+F+ A+
Sbjct:    2 AFVSSFVGGGVRGH-RVNGLGARRVE-----AVAAR-KNTVRMMQS--GASSYEGARIGPPPDLPSLLLHNRIIYLGMPLVPAVTELIIAELLYLQYDNAEKPVFMYINSTGTSSAEGQNVGFETEAFAIVDTMNYVKPPIHTICIGQAFGMAAMLLGAGEKGHRAALPNSTIMLHQPRGQAQGQAADIAIKAREVLFNRKQAFQIIADSCGQTLEQVQADANRTKYLTSVEAKEYGLIDKVLPSPKDLPVQAPSFMDAV 252          
BLAST of Gcaud2212.t1 vs. uniprot
Match: Q15GC4_RHDSA (ATP-dependent Clp protease proteolytic subunit (Fragment) n=1 Tax=Rhodomonas salina TaxID=52970 RepID=Q15GC4_RHDSA)

HSP 1 Score: 323 bits (829), Expect = 9.360e-109
Identity = 157/212 (74.06%), Postives = 180/212 (84.91%), Query Frame = 0
Query:   51 GGTMYDGARAGPPPDLPSLLLHNRIIYLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSSADGQNVGFETEAFAVVDTMNYVKMPVHTICVGQAFGMAGMLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNRRQAFEIIAERSGQPVEQIEKDAMRTKYFTPQEAVDYGLIDKVLLSEKDLPQKAPTFLSAL 262
            G   YDG R GPPPDLPSLLL+NRI+YLGM LVPAVTELI+AEFLYLQYE++ KPV+MY+NSTGTS+ DG + GFETEAFA+ DTMNYVK PVHTICVGQAFG   MLL+SGE THRAALPNATIM+HQP   A+GQASDIAIKA+EVLYNR+Q FEIIAE SGQP+E++ KDA RTKY TP EAV+YG+IDK+L S K +    PTFLS+L
Sbjct:   51 GAQNYDGVRIGPPPDLPSLLLNNRIVYLGMPLVPAVTELIVAEFLYLQYENSEKPVFMYLNSTGTSNPDGSSAGFETEAFAIADTMNYVKPPVHTICVGQAFGTCVMLLSSGEPTHRAALPNATIMIHQPTARAKGQASDIAIKAREVLYNRKQCFEIIAETSGQPLEKVMKDASRTKYLTPAEAVEYGIIDKILESTKSVSPTNPTFLSSL 262          
BLAST of Gcaud2212.t1 vs. uniprot
Match: A0A7S0ZCQ2_9RHOD (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZCQ2_9RHOD)

HSP 1 Score: 319 bits (818), Expect = 3.580e-107
Identity = 159/228 (69.74%), Postives = 186/228 (81.58%), Query Frame = 0
Query:   35 VARRVRLTPRAMQSAGGGTMYDGARAGPPPDLPSLLLHNRIIYLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSSADGQNVGFETEAFAVVDTMNYVKMPVHTICVGQAFGMAGMLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNRRQAFEIIAERSGQPVEQIEKDAMRTKYFTPQEAVDYGLIDKVLLSEKDLPQKAPTFLSAL 262
            V+ R   T RAMQ+  G + Y+GAR GPPPDLPSLLLHNRI+Y+GM LVPAVTELIIAE LYLQY D  KP++MY+NSTGT++ DG + GFETEAFAVVDTMNY+K PVHTIC+GQAFG A MLLA GEK HRAALPNAT+M+HQPR +A+GQA+DIAIKAKEVL NRR   EIIAE  G+ ++ +  DA RT+Y +  +AV+YGLIDKVL S KDLP  APTFLSAL
Sbjct:   31 VSARKPATIRAMQT--GASSYEGARIGPPPDLPSLLLHNRIVYIGMPLVPAVTELIIAELLYLQYNDTDKPIFMYVNSTGTTNPDGSSAGFETEAFAVVDTMNYIKPPVHTICIGQAFGTAAMLLAGGEKGHRAALPNATVMIHQPRSTARGQAADIAIKAKEVLLNRRVTMEIIAEACGKDLDTVMADAARTRYLSAADAVEYGLIDKVLESPKDLPSPAPTFLSAL 256          
BLAST of Gcaud2212.t1 vs. uniprot
Match: A0A7S1TPJ3_9RHOD (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TPJ3_9RHOD)

HSP 1 Score: 318 bits (814), Expect = 1.970e-106
Identity = 157/219 (71.69%), Postives = 183/219 (83.56%), Query Frame = 0
Query:   44 RAMQSAGGGTMYDGARAGPPPDLPSLLLHNRIIYLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSSADGQNVGFETEAFAVVDTMNYVKMPVHTICVGQAFGMAGMLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNRRQAFEIIAERSGQPVEQIEKDAMRTKYFTPQEAVDYGLIDKVLLSEKDLPQKAPTFLSAL 262
            RAMQ+  G + Y+GAR GPPPDLPSLLLHNRI+Y+GM LVPAVTELIIAE LYLQY DA KP+YMY+NSTGT++ DG + GFETEAFA+ DTMNY+K PVHTIC+GQAFG A MLLASGEK +RAALPNAT+M+HQPR SA+GQA DIAIKA+EVL NRR   EIIAER G+ ++ +  DA RT+Y +  EAV+YG+IDKVL S KDLP  APTFLSAL
Sbjct:   48 RAMQT--GVSSYEGARLGPPPDLPSLLLHNRIVYIGMPLVPAVTELIIAELLYLQYNDADKPIYMYLNSTGTTNPDGSSAGFETEAFAIADTMNYIKPPVHTICIGQAFGTAAMLLASGEKGNRAALPNATVMIHQPRSSARGQAEDIAIKAREVLLNRRVTMEIIAERCGKDLDIVMHDAARTRYLSAAEAVNYGVIDKVLESPKDLPSPAPTFLSAL 264          
BLAST of Gcaud2212.t1 vs. uniprot
Match: A9BLA7_HEMAN (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BLA7_HEMAN)

HSP 1 Score: 316 bits (809), Expect = 8.630e-106
Identity = 156/222 (70.27%), Postives = 183/222 (82.43%), Query Frame = 0
Query:   41 LTPRAMQSAGGGTMYDGARAGPPPDLPSLLLHNRIIYLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSSADGQNVGFETEAFAVVDTMNYVKMPVHTICVGQAFGMAGMLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNRRQAFEIIAERSGQPVEQIEKDAMRTKYFTPQEAVDYGLIDKVLLSEKDLPQKAPTFLSAL 262
            L+ ++MQ+  G   YDG R GPPPDLPSLLLHNRI+YLGM LVPAVTELI+AEFLYLQYE+A KPV+MY+NSTGTS+ DG + GFETEAFA+ DTMNY+K PVHTICVGQA G   MLL+SGE   RAALPN+TIM+HQPR  A+GQASDIAIKAKEVLYNR+Q FEIIA+ SGQ ++++ KDA RTKY TP EAV+YG+IDK+L S K L    P+FL AL
Sbjct:   38 LSIKSMQT--GAQNYDGVRIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIVAEFLYLQYENADKPVFMYLNSTGTSNPDGSSAGFETEAFAIADTMNYIKPPVHTICVGQALGTCAMLLSSGEPGQRAALPNSTIMVHQPRTQAKGQASDIAIKAKEVLYNRKQCFEIIAKTSGQSLQKVMKDASRTKYLTPGEAVEYGIIDKILESNKSLLSSDPSFLKAL 257          
BLAST of Gcaud2212.t1 vs. uniprot
Match: J7G2K1_9CRYP (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chroomonas mesostigmatica CCMP1168 TaxID=1195612 RepID=J7G2K1_9CRYP)

HSP 1 Score: 313 bits (803), Expect = 8.950e-105
Identity = 152/219 (69.41%), Postives = 184/219 (84.02%), Query Frame = 0
Query:   44 RAMQSAGGGTMYDGARAGPPPDLPSLLLHNRIIYLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSSADGQNVGFETEAFAVVDTMNYVKMPVHTICVGQAFGMAGMLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNRRQAFEIIAERSGQPVEQIEKDAMRTKYFTPQEAVDYGLIDKVLLSEKDLPQKAPTFLSAL 262
            +AMQ+  G   YDG R GPPPDLPSLLLHNRI+YLGM LVPAVTELI+AEFLYLQYE+A KP++MY+NSTGTS+ DG + GFETEAFA+ DTMNY+K PVHTICVGQA G   MLL+SGE   R+ALPNATIM+HQPR  A+GQASDIAIKA+EVLYNR+Q FEIIA+ SGQ ++++ KDA RTKY +P+EAV+YG+IDK+L S+K L    P+FL++L
Sbjct:   48 QAMQT--GAQNYDGVRIGPPPDLPSLLLHNRIVYLGMPLVPAVTELIVAEFLYLQYENAEKPIFMYLNSTGTSNPDGSSAGFETEAFAIADTMNYIKPPVHTICVGQALGTCAMLLSSGEPGQRSALPNATIMVHQPRTQARGQASDIAIKAREVLYNRKQCFEIIAKTSGQSLQKVMKDASRTKYLSPKEAVEYGIIDKILESQKSLSITDPSFLNSL 264          
BLAST of Gcaud2212.t1 vs. uniprot
Match: M2Y7R9_GALSU (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7R9_GALSU)

HSP 1 Score: 311 bits (797), Expect = 1.060e-103
Identity = 157/243 (64.61%), Postives = 192/243 (79.01%), Query Frame = 0
Query:   23 QTAVPEHTRRPAVARRVRLTPRAMQSA--GGGTMYDGARAGPPPDLPSLLLHNRIIYLGMSLVPAVTELIIAEFLYLQYEDASKPVYMYINSTGTSSADGQNVGFETEAFAVVDTMNYVKMPVHTICVGQAFGMAGMLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLYNRRQAFEIIAERSGQPVEQIEKDAMRTKYFTPQEAVDYGLIDKVLLSEKDLPQKAPTFLSALD 263
            Q  + +H ++  V R  RL+ R   +A   G + Y+GAR GPPPDLPSLLLHNRIIYLGM L+PAVTELIIAEFLYLQYE   KP+Y+YINSTGTS+ DG   GFETEAFAV DTM YVK PVHTICVGQA+G A +LLA+GEK  RAALP+AT+MLHQPR S QG ASDIAIKA+EVLYNR+  FE+++E +GQP E+I+KD+ RTKY TP+EA +YG+IDK+L S K+   + P+F+ AL+
Sbjct:   35 QLGILQHLKK--VRRLERLSNRCRTTAVETGASNYEGARLGPPPDLPSLLLHNRIIYLGMPLLPAVTELIIAEFLYLQYESGEKPIYLYINSTGTSNPDGSTAGFETEAFAVCDTMRYVKPPVHTICVGQAYGTAALLLAAGEKGFRAALPHATVMLHQPRSSTQGPASDIAIKAREVLYNRKVTFELLSESTGQPFEKIQKDSQRTKYMTPEEAKEYGIIDKILTSTKEPFVEKPSFIHALN 275          
The following BLAST results are available for this feature:
BLAST of Gcaud2212.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IN13_9FLOR1.570e-17092.05ATP-dependent Clp protease proteolytic subunit n=1... [more]
R7QEQ2_CHOCR2.280e-15587.12ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A1X6P675_PORUM8.780e-12182.46ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S3EA22_9RHOD7.330e-11871.15ATP-dependent Clp protease proteolytic subunit n=6... [more]
Q15GC4_RHDSA9.360e-10974.06ATP-dependent Clp protease proteolytic subunit (Fr... [more]
A0A7S0ZCQ2_9RHOD3.580e-10769.74ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A7S1TPJ3_9RHOD1.970e-10671.69ATP-dependent Clp protease proteolytic subunit n=1... [more]
A9BLA7_HEMAN8.630e-10670.27ATP-dependent Clp protease proteolytic subunit n=1... [more]
J7G2K1_9CRYP8.950e-10569.41ATP-dependent Clp protease proteolytic subunit n=1... [more]
M2Y7R9_GALSU1.060e-10364.61ATP-dependent Clp protease proteolytic subunit n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 105..125
score: 32.86
coord: 145..162
score: 50.69
coord: 166..185
score: 50.25
coord: 65..80
score: 42.5
coord: 223..242
score: 41.12
IPR001907ATP-dependent Clp protease proteolytic subunitHAMAPMF_00444ClpPcoord: 41..248
score: 31.824169
IPR001907ATP-dependent Clp protease proteolytic subunitCDDcd07017S14_ClpP_2coord: 73..244
e-value: 5.54525E-91
score: 264.689
NoneNo IPR availableGENE3D3.90.226.10coord: 51..251
e-value: 2.1E-64
score: 218.9
NoneNo IPR availablePANTHERPTHR10381:SF47ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 4, CHLOROPLASTICcoord: 54..249
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 98..264
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..97
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 68..245
e-value: 1.2E-52
score: 178.4
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 54..249
IPR033135ClpP, histidine active sitePROSITEPS00382CLP_PROTEASE_HIScoord: 167..180
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 62..249

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_492_length_23814_cov_5.019981contigNODE_492_length_23814_cov_5.019981:5555..6349 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2212.t1Gcaud2212.t1Gracilaria caudata M_176_S67 malemRNANODE_492_length_23814_cov_5.019981 5555..6349 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2212.t1 ID=Gcaud2212.t1|Name=Gcaud2212.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=265bp
MTAFVSSFAGAAVRPQFRQNALQTAVPEHTRRPAVARRVRLTPRAMQSAG
GGTMYDGARAGPPPDLPSLLLHNRIIYLGMSLVPAVTELIIAEFLYLQYE
DASKPVYMYINSTGTSSADGQNVGFETEAFAVVDTMNYVKMPVHTICVGQ
AFGMAGMLLASGEKTHRAALPNATIMLHQPRGSAQGQASDIAIKAKEVLY
NRRQAFEIIAERSGQPVEQIEKDAMRTKYFTPQEAVDYGLIDKVLLSEKD
LPQKAPTFLSALDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR023562ClpP/TepA
IPR033135ClpP_His_AS
IPR029045ClpP/crotonase-like_dom_sf