Gcaud2208.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2208.t1
Unique NameGcaud2208.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length109
Homology
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BLAST of Gcaud2208.t1 vs. uniprot
Match: A0A2V3J469_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J469_9FLOR)

HSP 1 Score: 149 bits (377), Expect = 3.900e-43
Identity = 64/100 (64.00%), Postives = 84/100 (84.00%), Query Frame = 0 
Query:    1 MDVVHNHPNTAFHNCEHHDAWIEVYHSRLSWKVSQISFKRDSETWIPFGKFKLIDASDIKPGFQAFRIIARRLEFKFANNTETELDNNVGRNYVIESPGR 100
            M   H+HPNTAF   + +D+W+EV+HSR SW++SQISFK+DSE+W+PF +FKLIDASD++PGF+ FRI A RLEFKFAN   T++++N G+NYVIESPGR
Sbjct:    1 MITAHDHPNTAFRGNKDYDSWVEVFHSRSSWRMSQISFKKDSESWVPFNRFKLIDASDVRPGFRVFRIRATRLEFKFANGKRTDIEDNSGKNYVIESPGR 100
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BLAST of Gcaud2208.t1 vs. uniprot
Match: A0A1X6P733_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P733_PORUM)

HSP 1 Score: 77.8 bits (190), Expect = 4.250e-15
Identity = 37/80 (46.25%), Postives = 51/80 (63.75%), Query Frame = 0 
Query:   21 WIEVYHSRLSWKVSQISFKRDSETWIPFGKFKLIDASDIKPGFQAFRIIARRLEFKFANNTETELDNNVGRNYVIESPGR 100
            +IEV+HS+ SW++  IS+  D   W+PF +F LIDAS ++PGF+ FRI A  L F+ +N   T  D+     YV  SPGR
Sbjct:   18 YIEVFHSKESWRICTISYSADGRPWVPFNRFCLIDASAVRPGFRVFRIRASTLSFRLSNGRGTG-DSANDSAYVAPSPGR 96
The following BLAST results are available for this feature:
BLAST of Gcaud2208.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J469_9FLOR3.900e-4364.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P733_PORUM4.250e-1546.25Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_19_length_78712_cov_4.326007contigNODE_19_length_78712_cov_4.326007:74831..75300 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2208.t1Gcaud2208.t1Gracilaria caudata M_176_S67 malemRNANODE_19_length_78712_cov_4.326007 74831..75300 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2208.t1 ID=Gcaud2208.t1|Name=Gcaud2208.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=109bp
MDVVHNHPNTAFHNCEHHDAWIEVYHSRLSWKVSQISFKRDSETWIPFGK
FKLIDASDIKPGFQAFRIIARRLEFKFANNTETELDNNVGRNYVIESPGR
LPEGSETK*
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