Gcaud2200.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2200.t1
Unique NameGcaud2200.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1453
Homology
BLAST of Gcaud2200.t1 vs. uniprot
Match: A0A2V3J326_9FLOR (PsbB mRNA maturation factor Mbb1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J326_9FLOR)

HSP 1 Score: 930 bits (2403), Expect = 0.000e+0
Identity = 823/1014 (81.16%), Postives = 882/1014 (86.98%), Query Frame = 0
Query:  442 AVTRALGPHGNRSFVNGYSNLFFRSDSIWSPGFDSHRGDPVGNSGGTEFGGRGDGNWGLDSNDSFSTFPGGTLEYGRRRGRDEPCASPVASLTLPPLASHLSSAPLVSSFGASSFTHTASPHTTEFLGPKSLPTANEYGQWQR----GPRFSNTHNVITSSALSASPADHNSTVAASKPKSVPNVSRAASEPSVGVRRRKRPSETPSTKYATAPPNHDQGRGPPPRSNKSYSSKHNTHHFQSKVRRQVRTIFERAKEEERNGNLNEARILLRQCLDLDKQDSHSWLALARLESRAGGVSTRASAHINQKDNDSEYHVHPPNAARGTELARSIFKLGLEECPNSVHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXXKGLRACKSAGNQSSAAIFRSXXXXXXXXXXXXXXXXXXXKAIATQPRMTEAYVALARLEARRGGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARSLLRKGHDCHPSDPAILQSLGTLEEKCGNLEEAKRLFYTSVCARPTAPAFVAWALXXXXXXXXXXXXXXXEEALSTDALHGAAYNXXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQFELKQGRNPDRARELFRLGVGQTREDTSFXXXXXXXXXXXXRQVRDARRVFLDALKRYPRNSRVLVGAALAHAASCSRTHSDEQEAVEFFKRAVAADPTHAHAWQAWGVFELRRGRPDAGQALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAALSGLKKQAEEFFGSEDQAVQVLKNGGQDVDPEVIENSDESLDGKYSAMATPMELALDGGDVYD 1451
            AVTRALGPHGNR+  NGYSNLFFR+DSIWSP  DSH GDPVGNSGGTEF G GD NWGL +N+SFSTFPGGTLEYGRR  RDEP  + VASLTLPP AS  S +PL+SSF  SSF   +SP +T  LG KS P  N    W         FSN  NV +  A S SP+DHNST + +K   V NVSR ASEP+VG+RR KR +++P+  +  A      G+ PP RSNK  SSKHN   + SK+RRQVRTIFERAKEEE+NGN NEAR LLRQCLDLDKQDSHSWLALARLE+RAGGV+ R  ++  Q + DS+     P+AARGTE+ARSIFK GL++CPNS+HLIQAWAVLEHRCGNR+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXX KGLRACK+AGNQSSAAIFRSXXXXXXXXXXXXXXXXXXXKAIATQPRMTEAYVAL RLEARRGGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRV+EAR LL+KGHDCHP+DPAILQSLGTLEE+CGNL+EAKRLFY SVCARP APAFVAWAL XXXXXXXXXXXXXXEEALSTDALHGAAYNXXXXXXXXXXXXXXXXXXXXX LKAHASASVWHGYGQ ELK GRNPDRARELF+ GVGQTREDTSF XXXXXXXX    QV +AR VF DALKRYPRNSRVLVGAALAHAAS SRT ++E EAV  F+RAV ADPTHAHAWQAWGVFELRRG        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV+AL GLKKQAEE+FGSE QAV+VLK+G QD+ P+V+EN+DE L+ KY+AM TPMELALDGG++YD
Sbjct:   47 AVTRALGPHGNRTITNGYSNLFFRTDSIWSPTLDSHHGDPVGNSGGTEFRGPGDNNWGLGNNNSFSTFPGGTLEYGRRHARDEPPPNHVASLTLPPPASQFSPSPLMSSFDGSSFAPHSSPQSTAILGSKSFPVGNSISPWSTXXXXSSHFSNNSNVFSPIASSVSPSDHNSTFSTTK-MHVNNVSRPASEPAVGIRRGKRVADSPTGSFPNAHGKQHYGQSPPHRSNKQ-SSKHNGQQYHSKIRRQVRTIFERAKEEEKNGNFNEARTLLRQCLDLDKQDSHSWLALARLEARAGGVALRNHSNAAQSETDSDQQSLAPSAARGTEIARSIFKQGLDQCPNSIHLIQAWAVLEHRCGNRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXEKGLRACKTAGNQSSAAIFRSXXXXXXXXXXXXXXXXXXXKAIATQPRMTEAYVALGRLEARRGGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVNEARKLLKKGHDCHPTDPAILQSLGTLEERCGNLDEAKRLFYRSVCARPIAPAFVAWALLXXXXXXXXXXXXXXEEALSTDALHGAAYNXXXXXXXXXXXXXXXXXXXXXXLKAHASASVWHGYGQLELKLGRNPDRARELFQQGVGQTREDTSFIXXXXXXXXLQQHQVLEARAVFHDALKRYPRNSRVLVGAALAHAASGSRTRAEEDEAVALFERAVGADPTHAHAWQAWGVFELRRGHSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSALGGLKKQAEEYFGSEAQAVRVLKSGEQDLGPDVVENADEGLERKYTAMVTPMELALDGGNLYD 1058          
BLAST of Gcaud2200.t1 vs. uniprot
Match: A0A2V3J2Z4_9FLOR (Histone-lysine N-methyltransferase MEDEA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2Z4_9FLOR)

HSP 1 Score: 592 bits (1525), Expect = 4.720e-191
Identity = 289/439 (65.83%), Postives = 352/439 (80.18%), Query Frame = 0
Query:    1 MQRRRPSRNVSLKSRKQLLSEIPDLVSSILYKHYAECSAYAKTVIEEVVEEATAFQTLERIRRETYLDQHDWGLSSRMESIRKKYSPEDDFVDPGLLALDAIVELSA-RTKRQAQRAQGRRAGRYNSIKVSMPFVHTPPKYDAWVPVKSNYWVGKELNLEPYMPFLGDQDKDCELAFEVFEDMAGGADKEIDLSDGEVTKEGKLRMPKDDVERVDYYSLQQMRWREGSRKSILAVLHQFIKFDDTMWRVLAIALGIQDVSRIKAIAKVAQKRRREHVMRIERRARQKQKLALYHKAWNDPAKSELEEQAESNRGSSFMKHYCLVCHMFACLQHESFNLEPIVPIPDKRTTEREKALKENLAKACSDDCFLIKQHHVIELDVEWSTEEILCMRECVPIFGLDPCSLALGVGSKSCRQVHEKLHDPMEADVAKQELANARR 438
            MQRR PSR  S K RKQLLSEIPD VS+IL +H+ EC+AY++ +IE  V +A+ F  LE IRR +YL++H+W LSS+MESIR KY  +++ +DP LLALDAIVE S+ R+K+   +  GRR  ++  ++VSMP+VH PPKYD W+PVK+NYWVGKELNLEPYMPFLGDQD+DCE AFEVFEDMAG  +KEIDLSDGEVT++GK RMPKDD++RVDYYSL QMRWREGSRK+ILAV+ QF+KFDDTMWRVLA ALGIQD+ R+KAIAKVAQ+RRREH  R++RR RQ++KL  Y +AW  P + EL E  E N  + FMKH+CL+CHMFAC QH SFNLEPI+PIPD RTTERE+ LK+ LA+ C  DCFL       E D +W  EEILCMRE VPIFGLDPCS+A+ VGSK+CR+V+ KL DP+EAD+ K ELA +RR
Sbjct:    1 MQRRHPSRPQSTKPRKQLLSEIPDSVSTILLQHHEECNAYSQRMIESSVTKASVFSELEGIRRISYLEEHEWSLSSKMESIRIKYYRDEEVLDPCLLALDAIVESSSQRSKKHVPKTSGRRGWKHGQLRVSMPYVHVPPKYDGWIPVKTNYWVGKELNLEPYMPFLGDQDQDCERAFEVFEDMAGSVEKEIDLSDGEVTRDGKFRMPKDDIDRVDYYSLAQMRWREGSRKAILAVMDQFVKFDDTMWRVLATALGIQDMRRVKAIAKVAQQRRREHEARVQRRQRQEKKLLEYERAWRRPRECELPENEEWNASTGFMKHFCLICHMFACPQHNSFNLEPIIPIPDARTTERERLLKDKLAEPCGGDCFLHDWDDSDEADEDWRAEEILCMRESVPIFGLDPCSIAVIVGSKTCREVNIKLGDPVEADIVKYELAKSRR 439          
BLAST of Gcaud2200.t1 vs. uniprot
Match: R7Q4Y4_CHOCR (TPR repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4Y4_CHOCR)

HSP 1 Score: 457 bits (1175), Expect = 1.730e-138
Identity = 332/537 (61.82%), Postives = 389/537 (72.44%), Query Frame = 0
Query:  682 RRQVRTIFERAKEEERNGNLNEARILLRQCLDLDKQDSHSWLALARLESRAGGVSTRASAHINQKDNDSEYHVHPPNAARGTELARSIFKLGLEECPNSVHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXXKGLRACKSAGNQSSAAIFRSXXXXXXXXXXXXXXXXXXXKAIATQPRMTEAYVALARLEARRGGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARSLLRKGHDCHPSDPAILQSLGTLEEKCGNLEEAKRLFYTSVCARPTAPAFVAWALXXXXXXXXXXXXXXXEEALSTDALHGAAYNXXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQFELKQGRNPDRARELFRLGVGQTREDTSFXXXXXXXXXXXXRQVRDARRVFLDALKRYPRNSRVLVGAALAHAASCSRTHSDEQEAVEFFKRAVAADPTHAHAWQAWGVFELRRGRPDA 1218
            RR +R  FERA+ EERNGN+  AR L R CL LD+ D+HSWLALARLE+R GGV+ R  +       D++      + A G + A+ +F+ GL ECP+SVHL+QAWAVLEHRCG+RD  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX T+ +  H     XXXXXXXXXXXXXXXXXXXX GL+ C+S+   S++ ++R+                   KAI +QP  TE+YVALA+LEARR  TTRA+EL+  AA LS KPP +VFNAWAQIEW   G+VDEARS+L++GH  HP DPA+LQSLG LE+KCG  E A++LFY SVC +P  PAFVAWAL               EE L+ D LHGAAYN XXXXXXXXXXXX        GLKA AS+SVWHGYGQ ELK G +P RARELFR G  +TR DTSF XXXXXX     ++V +AR++F +ALKRYPRNSRVLVGAALA AASC +  +D+  A +FFKRAVAADPTHAHAWQAWGVFELR GR DA
Sbjct:  105 RRVIRATFERARLEERNGNVPIARALYRDCLALDRGDAHSWLALARLEARVGGVNLRVGS-------DAKEITEKQSHAEGAKEAKRLFEEGLRECPDSVHLLQAWAVLEHRCGDRDAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTLQVGAHXXXXXXXXXXXXXXXXXXXXXXXXXXGLKNCRSSEGSSASNLWRNWAEMEERIGDLPRARELLSKAITSQPHFTESYVALAKLEARRSCTTRALELIATAAGLSAKPPPAVFNAWAQIEWAYRGKVDEARSILQRGHMMHPKDPALLQSLGILEDKCGKTEVARKLFYKSVCVKPAGPAFVAWALLEDREGNYEEANRLFEECLTIDPLHGAAYNAXXXXXXXXXXXXKARSVYGRGLKACASSSVWHGYGQLELKLGGDPARARELFRKGTEKTRGDTSFIXXXXXXLELTEKRVIEARQLFKNALKRYPRNSRVLVGAALAEAASCPQYIADKNSARDFFKRAVAADPTHAHAWQAWGVFELRSGREDA 634          
BLAST of Gcaud2200.t1 vs. uniprot
Match: R7QTM2_CHOCR (SET domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTM2_CHOCR)

HSP 1 Score: 353 bits (907), Expect = 4.310e-102
Identity = 188/431 (43.62%), Postives = 275/431 (63.81%), Query Frame = 0
Query:   13 KSRKQLLSEIPDLVSSILYKHYAECSAYAKTVIEEVVEEATAFQTLERIRRETYLDQHDWGLSSRMESIRKKYSPEDDFV--DPGLLALDAIVELSARTKRQAQRAQGRRAGRYNSIKVSMPFVHTPPKYDAWVPVKSNYWVGKELNLEPYMPFLGDQDKDCELAFEVFEDMAGGADKEIDLSDGEVTKEGKLRMPKDDVERVDYYSLQQMRWREGSRKSILAVLHQFI--KFDDTMWRVLAIALGIQDVSRIKAIAKVAQKRRREHVMRIERRARQKQKLALYHKAWNDPAKSELEEQAESNRGSSFMKHYCLVCHMFACLQHESFNLEPIVPIPDKRTTEREKALKENLAKACSDDCFL-IKQHHVIELDVEWSTEEILCMRECVPIFGLDPCSLALGVGSKSCRQVHEKLHDPMEADVAKQELANARR 438
            K R+ L++EIPDLVS I+  H + C +YAK  + + V E       ER+ R+  + + DW +  R + I     PE      DP L ALD I+ L++ T+  + + +G  +     I+V MP   + PKYD W+PV+ NYW GK+L++EPYMPFLGDQD DCELAFEV+EDMA  A +++DLSDGEV K+G+  +PKDD+ER  YYS+ Q RWREG R+SILAVL +F   KFD+++WRVLA ALG+++  RIKAIA+VA+ RR E      R+ ++K+      +A + P + ++  + + +   + +K +C  CH F C QH   ++EP++PI D   + REK L    A  CS  C+L + +   I+ D  WS +EI+ +RE VP+FG+DPCSL++ +GS++C +V  KL D +E D+A  E+  AR+
Sbjct:   17 KLRRDLVNEIPDLVSGIMLGHLSACQSYAKKRVRKEVVEQEGSLPKERVNRDDCIRRQDWLVVHRFQKIIDDL-PEQQVTQFDPSLSALDEILNLNSATRPSSVQKKGVSS---RVIRVKMPETASVPKYDTWIPVRDNYWAGKQLHVEPYMPFLGDQDDDCELAFEVYEDMADDAGQQLDLSDGEVGKDGRFSLPKDDIERCTYYSMAQARWREGCRQSILAVLDKFKGKKFDESVWRVLATALGVKETGRIKAIARVAKDRRHEKRSESARQKKEKEMSRAVAEAKSIPVEDDMPLEEDWSARINPLKAFCFTCHCFPCPQHADVDVEPVLPIEDLAASAREKQLVTEKALPCSKHCWLAVPEDTDIDFDQNWSPQEIVLLREGVPMFGMDPCSLSVILGSRTCIEVSMKLDDNIETDIALHEIQKARK 443          
BLAST of Gcaud2200.t1 vs. uniprot
Match: A0A1X6PKZ8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PKZ8_PORUM)

HSP 1 Score: 222 bits (565), Expect = 9.460e-57
Identity = 250/547 (45.70%), Postives = 304/547 (55.58%), Query Frame = 0
Query:  681 VRRQVRTIFERAKEEERNGNLNEARILLRQCLDLDKQDSHSWLALARLESRAGGVS------------TRASAH------------------------INQKDNDSEYHVHPPNA-ARGTELA---RSIFKLGLEECPNSVHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXXKGLRACKSAGNQ---------SSAAIFRSXXXXXXXXXXXXXXXXXXXKAIATQPRMTEAYVALARLEARRGGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARSLLRKGHDCHPSDPAILQSLGTLEEKCGNLEEAKRLFYTSVCARPTAPAFVAWALXXXXXXXXXXXXXXXEEALSTDALHGAAYNXXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQFELKQGRNPDRARELFRLGVGQTREDTSFXXXXXXXXXXXXRQ----VRDARRVFLDALKRYPRNSRVLVGAALAHAAS 1174
            VRRQVR +++ A+  ER G+L EAR LL +CL LD++D+HSWLALARLE+RA G++            + A+AH                        + ++D  +     P     RG ++A   R +F+ GL ECP++VHL+QAWAVLEHRCGN D+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +V+LRP  EV  XXXXXXXXXXXXXXXXXXXX          +          ++AA+ R+XXXXXXXXXXXXXXXX   +A+  +   +  +VAL +LEAR        EL+ AA S+   PPAS ++A AQ+E T  G V  AR LL  GH  HP D A+LQSLG +E + GN  EA+  F  SV A PTA AFVAWAL               E AL++D  HG AYN                     GL A AS SV HG                         TREDTS+                     A  VF D L+RYPRNS++LVGAALA  AS
Sbjct:  156 VRRQVRELYDHARACERAGSLAEARSLLVECLALDRRDAHSWLALARLEARAAGLAGVRSVDVVGTGASPAAAHSXXXXXXXXXXSSNSFGNVPGAAVVLREDAPAAADAFPAGGDGRGLDVAATARRVFQQGLAECPDNVHLLQAWAVLEHRCGNNDSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERSVALRPQREVXXXXXXXXXXXXXXXXXXXXXXXXXTVPPEVADTPTASIRQAAAAAALLRAXXXXXXXXXXXXXXXXLLVRALGVRRGQSATHVALGKLEARXXXXXXXXELLHAALSMDDVPPASAYHAIAQLEATSFGDVATARELLLAGHAAHPQDSALLQSLGMIETRAGNRPEARDYFRRSVAAAPTAAAFVAWALLEAADGATQAAVDLFERALASDPRHGPAYNAYGALEARRGRIDSARAVFDRGLAAGASVSVLHGXXXXXXXXXXXXXXXXXXXXXXAC-TREDTSYVWHSWGMLELHALGEGGGASAATAVFADGLRRYPRNSQLLVGAALAAVAS 701          
BLAST of Gcaud2200.t1 vs. uniprot
Match: A0A7S1TF60_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TF60_9RHOD)

HSP 1 Score: 193 bits (490), Expect = 9.970e-47
Identity = 253/543 (46.59%), Postives = 320/543 (58.93%), Query Frame = 0
Query:  679 SKVRRQVRTIFERAKEEERNGNLNEARILLRQCLDLDKQDSHSWLALARLESRAGGVSTRASAHINQKDNDSEYHVHPPNAARGTELARSIFKLGLEECPNSVHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXXKGLRACKSAGNQSS--AAIFRSXXXXXXXXXXXXXXXXXXXKAIATQPRMTEAYVALARLEARRGGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARSLLRKGHDCHPSDPAILQSLGTLEEKCGNLEEAKRLFYTSVCARPTAPAFVAWALXXXXXXXXXXXXXXXEEALSTDALHGAAYNXXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQFE-LKQGRNPDRARELFRLGVGQTREDTSFXXXXXXXXXXXXRQVRDARRVFLDALKRYPRNSRVLVGAALAHAASCSRTHSDEQEAVEFFKRAVAADPTHAHAWQAWGVFELRRGRPDA 1218
            +++R +V+  F++ K  E+ G    AR+  ++CL++D +D+HSWLALARLE+R G                   +   PNA       R +F+ G + CP +V ++QAWAV+E++ G+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  + +RP  EV  XXXXXXXXXXXXXXXXXXXX+ +  C  + + +   A   R XXXXXXXXXXXXXXXXXXX  +  +   +E ++ LARLEARRG T RA+ELM  AAS+ P   ASV+N WA +     G+V EA  ++RKG +  P DP+I                           RPTAPAFVAWAL               E+A+  D LHG    XXXXXXXXXXXXXXXXXXXXX                   +  GR+ +R+R++FR GV Q+R+D SF            R   +ARR+F +A K YP NSR+LVG+ LA  AS         +A   F+ AV +DPTH   WQ WGVFELR+G  DA
Sbjct:  113 AELRARVKMCFQQGKTCEKRGEWLNARMNYQECLNMDPRDAHSWLALARLEARRG-------------------YKFLPNA-------RLLFEAGTQCCPENVRILQAWAVMEYKSGDIALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKCLEIRPRLEVXXXXXXXXXXXXXXXXXXXXXXEAISTCTPSEHTAPRIARTLRQXXXXXXXXXXXXXXXXXXXXXLRVE-LSSETHLTLARLEARRGSTKRALELMSVAASM-PGATASVYNGWA-VMLVDQGQVSEALEVIRKGINALPLDPSIFXXXXXXXXXXXXXXXXXXXXXXXXDLRPTAPAFVAWALLEERCEFYERARALFEKAIRVDPLHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMTLGRDLNRSRQIFRQGVTQSRDDASFIWHSWGMLELKNRDPLEARRIFQEARKLYPTNSRILVGSGLAFGASRPGLLPQLDDARRCFRAAVLSDPTHPQGWQCWGVFELRQGNTDA 626          
BLAST of Gcaud2200.t1 vs. uniprot
Match: A0A7S0G728_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G728_9RHOD)

HSP 1 Score: 182 bits (463), Expect = 8.280e-46
Identity = 151/301 (50.17%), Postives = 179/301 (59.47%), Query Frame = 0
Query:  922 EAYVALARLEARRGGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARSLLRKGHDCHPSDPAILQSLGTLEEKCGNLEEAKRLFYTSVCARPTAPAFVAWALXXXXXXXXXXXXXXXEEALSTDALHGAAYNXXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQFELKQGRNPDRARELFRLGVGQTREDTSFXXXXXXXXXXXXRQVRDARRVFLDALKRYPRNSRVLVGAALAHAASCSRTHSDEQEAVEFFKRAVAADPTHAHAWQAWGVFELRRGRPDAGQAL 1222
            E  + LA+LEAR G   + ++LM+   S + +  A+ +N WA +E          R LL++G+   P D A+LQ+ GTLEEKC   E A+ L+  SV  RPTA A VA   XXXXXXXXXXXXXXX      D LHGAAY+ XXXXXXXXXXXXXXXXXXXX      SASV  GY Q E+K G   DRARELFR GV QTR D SF            R    AR + L+A KRY  NSR+L  +ALA A S      D +++ EFFK AV  DP HAHAWQ WGV E R G     + L
Sbjct:  132 ETRIKLAKLEARAGSLLKGLDLMKGVDSEAEQLSANAYNGWAFLEMQAAN-TGRTRELLKEGNAKFPMDGALLQTWGTLEEKCCEYETARELYSKSVEVRPTAVALVAXXXXXXXXXXXXXXXXXXXXXXRVDPLHGAAYHAXXXXXXXXXXXXXXXXXXXXXXXRDPSASVLVGYAQLEMKFGSRKDRARELFRRGVSQTRGDASFIWHAWLTMELRERDPLSARSIALEARKRYSGNSRILAASALAEAMSARGVPPDLEKSREFFKEAVLLDPFHAHAWQTWGVHEFRNGNEAIARGL 431          
BLAST of Gcaud2200.t1 vs. uniprot
Match: A0A5J4YQR2_PORPP (PsbB mRNA maturation factor Mbb1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQR2_PORPP)

HSP 1 Score: 181 bits (458), Expect = 1.180e-42
Identity = 222/575 (38.61%), Postives = 280/575 (48.70%), Query Frame = 0
Query:  682 RRQVRTIFERAKEEERNGNLNEARILLRQCLDLDKQDSHSWLALARLESRAGGVSTRASAHINQKDNDSEYHVHPPNAARGTELARSIFKLGLEECPNSVHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXXKGLRACKSA---------GNQSSAAIFRSXXXXXXXXXXXXXXXXXXXKAIATQPRMT-------------------------------EAYVALARLEARRGGTTR--AVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARSLLRKGHDCHPSDPAILQSLGTLEEKCGNLEEAKRLFYTSVCARPTAPAFVAWALXXXXXXXXXXXXXXXEEALSTDALHGAAYNXXXXXXXXXXXXXXXXXXXXXGLKAHA-SASVWHGYGQFELKQGRNPDRARELFRLGVGQTREDTSFXXXXXXXXXXXXRQVRDARRVFLDALKRYPRNSRVLVGAALAHAASCSRTHSDEQEAVEFFKRAVAADPTHAHAWQAWGVFELRR 1213
            +R V  +F RAK+ E       A+ L  + L +D++D H+WLAL +L +R    STRA                           R IF+  L  C ++V L+QA+AV E + GN   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VS+RP  +VC XXXXXXXXXXXXXXXXXXXX  LR               N S++    S                   K I TQ R+                                E  + LARL++R   ++   A+  +R A  L  K P +V N WA +E    G   +A  +L  G   +PSDP I  +LGT+ E C   E+A+  +  SV A   AP  VAWAL               + AL  D LHG AYN                     GL +   S S++HG  Q    +G   D+AR L R GV  TRE T +              V +ARR+   A+KRYP +SRVL+ AALA++A  +   ++   A E F++AV ADP HAHAWQ WGVFE  R
Sbjct:  114 KRAVVDLFRRAKKLESENQCAAAQALYEEGLAIDRRDGHTWLALGQLIARKD--STRA---------------------------REIFEEALRHCHDNVFLLQAFAVFESKNGNVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCVSIRPQSQVCLXXXXXXXXXXXXXXXXXXXXXXLRIAPGTRGHRNVTRRANTSTSGSAASGGASTSSSPAKAPHDRKLGKYIDTQCRVLCAWAELEERMGDHKEALQLLNRALELQKDDPETIMVLARLQSRTSASSMQPALLTLRNALHLDDKLPRNVINGWANLELKA-GNAYKALEILNAGKVHYPSDPCIFMTLGTVHESCSQFEQARDWYARSVDAEARAPTLVAWALLEERCGHFDLARSLFQRALRVDPLHGQAYNAYAMMEQRLNDQERALAVYQHGLDSGVCSVSLYHGASQLHKARGEY-DQARALLRQGVLLTRESTVYLWHSWGMLEIRLNNVSEARRIGELAMKRYPNDSRVLLVAALAYSACSAEYVAEVDRARELFRKAVLADPMHAHAWQVWGVFEASR 657          
BLAST of Gcaud2200.t1 vs. uniprot
Match: A0A7S1EU19_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EU19_9RHOD)

HSP 1 Score: 177 bits (450), Expect = 2.270e-42
Identity = 241/558 (43.19%), Postives = 304/558 (54.48%), Query Frame = 0
Query:  664 SNKSYSSKHNTHHFQSKVRRQVRTIFERAKEEERNGNLNEARILLRQCLDLDKQDSHSWLALARLESRAGGVSTRASAHINQKDNDSEYHVHPPNAARGTELARSIFKLGLEECPNSVHLIQAWAVLEHRCGNRDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVSLRPHPEVCAXXXXXXXXXXXXXXXXXXXXKGLRACKSAGNQSS--------AAIFRSXXXXXXXXXXXXXXXXXXXKAIATQPRMTEAYVALARLEARRGGTTRAVELMRAAASLSPKPPASVFNAWAQIEWTCCGRVDEARSLLRKGHDCHPSDPAILQSLGTLEEKCGNLEEAKRLFYTSVCARPTAPAFVAWALXXXXXXXXXXXXXXXEEALSTDALHGAAYNXXXXXXXXXXXXXXXXXXXXXGLKAHASASVWHGYGQFELKQGRNPDRARELFRLGVGQTREDTSFXXXXXXXXXXXXRQVRDARRVFLDALKRYPRNSRVLVGAALAHAASCSRTHSDEQEAVEFFKRAVAADPTHAHAWQAWGVFELRR 1213
            S++ Y    +T + +   R +V   +  A E  R G    A  LL QC+ +D  DSHSWLALAR +SR    +T                           LA   F+  +  CP++VHL+QA+ V + R G+ D             XXXXXXXXXXXXXXXXXXXXXXXXXXX  +V +   PEVC XXXXXXXXXXXXXXXXX      RA   +  +S+        A I R XXXXXXXXXXXXXXXXX  +A+      TE  +A+AR +AR G    AVE +R +     +  ++V+N WA +E    G ++ AR LLR+ H+ +PSD ++L + G +E+K  N E A+ L+  S    P +   V+WAL XXXXXXXXXXXXXX   L  +  HG AYN  XXXXXXXXXXXXXXXXXXX                                  GV  TRED+SF            R+V +A RV   A +R+P NS++L+ + L  A   S   SD   A  FFKRAV++DP HAHAWQ WGVFELR+
Sbjct:   69 SSEVYPESSSTANIKENTRSKVVKNYTEALELFRQGKTKAACGLLEQCIKMDPTDSHSWLALARFQSRLEPATT---------------------------LAIQTFENAIINCPDNVHLLQAFGVEQGRRGHFDRARALFASAKDLQXXXXXXXXXXXXXXXXXXXXXXXXXXXFKSVKINKQPEVCXXXXXXXXXXXXXXXXXXLYRAAFRATDKSYRESAMDRRERTKAWILRXXXXXXXXXXXXXXXXXXLEQALQHGKNRTETRMAIARFQARHGTVQAAVESLRESCLGREQATSNVYNGWATLE-ARAGNINRARELLREAHEMYPSDSSLLHTWGDVEQKDKNYEAARDLYRRSTNVAPRSMTLVSWALLXXXXXXXXXXXXXXXXXLELEPSHGPAYNAYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKGVRLTREDSSFLWHSWGMMELKQRRVHEAERVLTIARRRFPNNSQILLASGLTSAFGTSDHPSDTNRARAFFKRAVSSDPKHAHAWQVWGVFELRQ 598          
BLAST of Gcaud2200.t1 vs. uniprot
Match: A0A2V3IZC2_9FLOR (Histone-lysine N-methyltransferase MEDEA n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZC2_9FLOR)

HSP 1 Score: 148 bits (374), Expect = 1.600e-32
Identity = 113/383 (29.50%), Postives = 192/383 (50.13%), Query Frame = 0
Query:   65 TYLDQHDWGLSSRMESIRKKYSPEDDFVDPGLLALDAIVELSARTKRQAQRAQGRRAGRYNSIKVSMPFVHTPPKYDAWVPVKSNYWVGKELNLEPYMPFLGDQDKDCELAFEVFEDMAGGADKEID---LSDGEVTKEGKLRMPKDDVERVDYYSLQQMRWREGSRKSILAVLHQFIKFDDTMWRVLAIALGIQDVSRIKAIAKVAQKR--RREHVMRIERRARQKQKLALYHKAWNDPAKSELE-EQAESNRGSSFMKHYCLVCHMFACLQHESFNLEPIVPIPDKRTTEREKALKENLAKACSDDCFLIKQH----HVIELDVEWSTEEILCMRECVPIFGLDPCSLALGVGSKSCRQVHEKLHDPMEADVAKQELANAR 437
            T  D +   ++S+ + I     P+    D    ALDAIV+         Q   G        + + M  V   PK+ AW+PV+ NY +  +++L+PY P+ G+   + + A E +++M     +  D   +SDG    +G+L +P   V++  +Y+++  + R   R +IL  + +F +    +   LA+ L I D  RI  I +VA  R  +R+      R+AR++ K AL+H A++ P   +L     + N  ++   H+C  C +F C  H   N  P+ PIPD   TER   L+   AK CS  CFL+++H       +  + W+ EEI+ MR+   +   DPCSLA+ VG+K+CR+V  ++    E     + +++A+
Sbjct:   98 TISDDYLTSINSKHKHIPPATRPKPPPTDKAKAALDAIVQ---------QHTSG-------PMLLDMRSVRRNPKFVAWIPVQQNY-LENDVDLDPYRPYFGESKSEMDKAEEAYKNMLEDISRNDDGEFISDGXXDSQGEL-LP---VDQEKFYTVRARKERASQRHTILETITRFGQQHHIITS-LAMQLRISDTRRILHIYEVAVAREEKRKETFETRRKARER-KHALFH-AFDFPQPEKLPPSNVKWNDTAAMQSHFCFQCFVFCCEMHPEENHPPVRPIPDVTITERMDDLRIGRAKPCSSRCFLLEEHLQAPKSAQEGLPWTDEEIMVMRQGCLMTDEDPCSLAIIVGTKTCREVRARISKQEERVWIMEAISSAK 456          
The following BLAST results are available for this feature:
BLAST of Gcaud2200.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A2V3J326_9FLOR0.000e+081.16PsbB mRNA maturation factor Mbb1, chloroplastic n=... [more]
A0A2V3J2Z4_9FLOR4.720e-19165.83Histone-lysine N-methyltransferase MEDEA n=1 Tax=G... [more]
R7Q4Y4_CHOCR1.730e-13861.82TPR repeat-containing protein n=1 Tax=Chondrus cri... [more]
R7QTM2_CHOCR4.310e-10243.62SET domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A1X6PKZ8_PORUM9.460e-5745.70Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TF60_9RHOD9.970e-4746.59Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A7S0G728_9RHOD8.280e-4650.17Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A5J4YQR2_PORPP1.180e-4238.61PsbB mRNA maturation factor Mbb1, chloroplastic n=... [more]
A0A7S1EU19_9RHOD2.270e-4243.19Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A2V3IZC2_9FLOR1.600e-3229.50Histone-lysine N-methyltransferase MEDEA n=1 Tax=G... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003107HAT (Half-A-TPR) repeatSMARTSM00386hat_new_1coord: 862..899
e-value: 1.3
score: 18.1
coord: 971..1003
e-value: 54.0
score: 10.0
coord: 1038..1070
e-value: 17.0
score: 13.8
coord: 1214..1246
e-value: 8.4
score: 15.3
coord: 795..827
e-value: 34.0
score: 11.5
coord: 1350..1382
e-value: 0.0023
score: 27.2
coord: 1072..1103
e-value: 0.2
score: 20.8
coord: 1282..1314
e-value: 2.2
score: 17.3
coord: 901..933
e-value: 2.2
score: 17.3
coord: 761..793
e-value: 3.1
score: 16.8
coord: 1106..1139
e-value: 460.0
score: 3.2
coord: 699..731
e-value: 2.6
score: 17.0
coord: 1248..1280
e-value: 0.018
score: 24.2
coord: 829..860
e-value: 1200.0
score: 0.2
coord: 1316..1348
e-value: 29.0
score: 12.0
coord: 1180..1212
e-value: 7.8
score: 15.4
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 1200..1233
e-value: 43.0
score: 9.4
coord: 1336..1369
e-value: 0.1
score: 21.7
coord: 1166..1199
e-value: 13.0
score: 14.0
coord: 1302..1335
e-value: 130.0
score: 5.2
coord: 685..718
e-value: 10.0
score: 14.9
coord: 1024..1057
e-value: 38.0
score: 9.9
coord: 1058..1091
e-value: 430.0
score: 0.6
coord: 887..920
e-value: 31.0
score: 10.7
coord: 781..814
e-value: 110.0
score: 5.8
coord: 1234..1267
e-value: 37.0
score: 10.0
coord: 921..954
e-value: 350.0
score: 1.4
coord: 815..848
e-value: 84.0
score: 6.8
coord: 1268..1301
e-value: 110.0
score: 5.7
coord: 1127..1160
e-value: 74.0
score: 7.3
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1336..1369
score: 11.239901
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1166..1199
score: 8.1719
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1129..1210
e-value: 3.4E-6
score: 28.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1214..1415
e-value: 1.8E-36
score: 127.8
coord: 1026..1128
e-value: 1.9E-17
score: 65.4
coord: 663..885
e-value: 7.7E-30
score: 106.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 886..1025
e-value: 7.3E-15
score: 57.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1059..1268
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1239..1386
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 774..1202
NoneNo IPR availablePFAMPF13428TPR_14coord: 1201..1242
e-value: 5.1E-5
score: 23.7
NoneNo IPR availablePFAMPF13432TPR_16coord: 1278..1333
e-value: 5.9E-4
score: 20.3
coord: 1029..1089
e-value: 1.7E-4
score: 22.1
coord: 1133..1199
e-value: 3.3E-7
score: 30.8
coord: 894..952
e-value: 4.7E-4
score: 20.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 562..625
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 562..682
IPR044624Tetratricopeptide-like repeat protein Mbb1-likePANTHERPTHR44917PROTEIN HIGH CHLOROPHYLL FLUORESCENT 107coord: 1061..1228
coord: 692..850
coord: 1029..1162
coord: 811..1056
coord: 1220..1387

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_19_length_78712_cov_4.326007contigNODE_19_length_78712_cov_4.326007:49568..55387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2200.t1Gcaud2200.t1Gracilaria caudata M_176_S67 malemRNANODE_19_length_78712_cov_4.326007 49568..55387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2200.t1 ID=Gcaud2200.t1|Name=Gcaud2200.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1453bp
MQRRRPSRNVSLKSRKQLLSEIPDLVSSILYKHYAECSAYAKTVIEEVVE
EATAFQTLERIRRETYLDQHDWGLSSRMESIRKKYSPEDDFVDPGLLALD
AIVELSARTKRQAQRAQGRRAGRYNSIKVSMPFVHTPPKYDAWVPVKSNY
WVGKELNLEPYMPFLGDQDKDCELAFEVFEDMAGGADKEIDLSDGEVTKE
GKLRMPKDDVERVDYYSLQQMRWREGSRKSILAVLHQFIKFDDTMWRVLA
IALGIQDVSRIKAIAKVAQKRRREHVMRIERRARQKQKLALYHKAWNDPA
KSELEEQAESNRGSSFMKHYCLVCHMFACLQHESFNLEPIVPIPDKRTTE
REKALKENLAKACSDDCFLIKQHHVIELDVEWSTEEILCMRECVPIFGLD
PCSLALGVGSKSCRQVHEKLHDPMEADVAKQELANARRCNVAVTRALGPH
GNRSFVNGYSNLFFRSDSIWSPGFDSHRGDPVGNSGGTEFGGRGDGNWGL
DSNDSFSTFPGGTLEYGRRRGRDEPCASPVASLTLPPLASHLSSAPLVSS
FGASSFTHTASPHTTEFLGPKSLPTANEYGQWQRGPRFSNTHNVITSSAL
SASPADHNSTVAASKPKSVPNVSRAASEPSVGVRRRKRPSETPSTKYATA
PPNHDQGRGPPPRSNKSYSSKHNTHHFQSKVRRQVRTIFERAKEEERNGN
LNEARILLRQCLDLDKQDSHSWLALARLESRAGGVSTRASAHINQKDNDS
EYHVHPPNAARGTELARSIFKLGLEECPNSVHLIQAWAVLEHRCGNRDTA
RELFARGLALEPDNPYVSQAWGLLEQRVGNTDKARELFRQTVSLRPHPEV
CAAWAVLEAREGNIQYARDLYRKGLRACKSAGNQSSAAIFRSWAELEERV
GDLSKARELLNKAIATQPRMTEAYVALARLEARRGGTTRAVELMRAAASL
SPKPPASVFNAWAQIEWTCCGRVDEARSLLRKGHDCHPSDPAILQSLGTL
EEKCGNLEEAKRLFYTSVCARPTAPAFVAWALLEEKGGNLDEAKRLFEEA
LSTDALHGAAYNAYGMMEARRGRLNHARAVYERGLKAHASASVWHGYGQF
ELKQGRNPDRARELFRLGVGQTREDTSFIWHSWGMLELQQRQVRDARRVF
LDALKRYPRNSRVLVGAALAHAASCSRTHSDEQEAVEFFKRAVAADPTHA
HAWQAWGVFELRRGRPDAGQALFRRGLRLCPSHGALWQAWGVLETSRGDF
SKARQLYEKGAQACPAHVHLFQAWACMEVRSGNIDKARSLLNHALELDAA
HGAVWNAYGLLEARHGSLAKARQNFSTGIRRSPHHAPLYRAFGQAESRAG
NYERARQLFQQGLRVDPRHAPLYHAYAQLEAMLGNVAALSGLKKQAEEFF
GSEDQAVQVLKNGGQDVDPEVIENSDESLDGKYSAMATPMELALDGGDVY
DK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003107HAT
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR044624Mbb1-like