Gcaud2195.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2195.t1
Unique NameGcaud2195.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length175
Homology
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BLAST of Gcaud2195.t1 vs. uniprot
Match: A0A2V3J2U9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2U9_9FLOR)

HSP 1 Score: 176 bits (446), Expect = 2.700e-53
Identity = 136/174 (78.16%), Postives = 146/174 (83.91%), Query Frame = 0 
Query:    1 MSDLNDFFAKKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKVPDDGWIEIEDVRGSQVNTGGRTIVQLRRDGEEKEINPDGHANTEKFSGWAKTDVTP-TDEEQTTAAQAPSSAFPTLADAAKVKKVAPTKPSSEPPSTARRPRFTLANREKLLQALTAGREPMKPT 173
            MSDLNDFFAKKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K PDDGWIEIEDVRGSQVNTGGRTIVQL+R  EEKE + DG A  EKFSGWAKTD  P T +     AQAPSSAFP+LADAAKVKKV P+K +++     RRPR +LA REKL+QALTA REPMKPT
Sbjct:    1 MSDLNDFFAKKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KQPDDGWIEIEDVRGSQVNTGGRTIVQLKRGAEEKETSVDGSATVEKFSGWAKTDADPPTSDAPDETAQAPSSAFPSLADAAKVKKVPPSKSATKEGPPVRRPRMSLAEREKLIQALTANREPMKPT 173
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BLAST of Gcaud2195.t1 vs. uniprot
Match: R7Q4N6_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4N6_CHOCR)

HSP 1 Score: 103 bits (256), Expect = 1.520e-24
Identity = 74/177 (41.81%), Postives = 91/177 (51.41%), Query Frame = 0 
Query:    1 MSDLNDFFAKKDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQKVPDDGWIEIEDVRGSQVNTGGRTIVQLRRDGEEKEINPDGHANTEKFSGWAKTDVTPTDEE-QTTAAQA---PSSAFPTLADAAKVKKVAPTKPSSEPPSTA------RRPRFTLANREKLLQALTAGR 167
            MSDLNDFFAKKDR                                 Q+  DDGWIEIED +G++VNTGGRT+V+ +R  EE +   DG+  TEKF+GW K    PT EE + TAA A   PSSAFP+LAD     +V  +   S   +T       RRPRF  +N  K+ Q L   R
Sbjct:    1 MSDLNDFFAKKDRKKKKAGARSSAGVVQRKEQEPETEPSIAEPSPKQQ--DDGWIEIEDPKGAKVNTGGRTVVEFKRGVEENDNQIDGNEPTEKFTGWIKESSEPTAEEAEETAAPAAAIPSSAFPSLADTTDAPEVPLSHGKSFSSTTTSGLSSTRRPRFFNSNASKIRQKLEEDR 175
The following BLAST results are available for this feature:
BLAST of Gcaud2195.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J2U9_9FLOR2.700e-5378.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4N6_CHOCR1.520e-2441.81Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_19_length_78712_cov_4.326007contigNODE_19_length_78712_cov_4.326007:39107..39807 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2195.t1Gcaud2195.t1Gracilaria caudata M_176_S67 malemRNANODE_19_length_78712_cov_4.326007 39107..39807 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2195.t1 ID=Gcaud2195.t1|Name=Gcaud2195.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=175bp
MSDLNDFFAKKDRKKKKAAAKSAQAAAAQAVKQSETASENPPPPPPQKVP
DDGWIEIEDVRGSQVNTGGRTIVQLRRDGEEKEINPDGHANTEKFSGWAK
TDVTPTDEEQTTAAQAPSSAFPTLADAAKVKKVAPTKPSSEPPSTARRPR
FTLANREKLLQALTAGREPMKPTK*
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