Gcaud2157.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2157.t1
Unique NameGcaud2157.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length312
Homology
BLAST of Gcaud2157.t1 vs. uniprot
Match: A0A2V3IUY2_9FLOR (Golgi to ER traffic protein 4-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUY2_9FLOR)

HSP 1 Score: 475 bits (1222), Expect = 5.340e-167
Identity = 231/309 (74.76%), Postives = 271/309 (87.70%), Query Frame = 0
Query:    1 MASLNSLQKRYERSIHNEDYYGAEQACIMMHHRLTQGKNQAPDVIDRALNILLDASVTLLSKKQAQAGSSLALAAVRHYIEYKKKVTDESVSALRKIADTYDPTAGNDAEVRREKLRFLKAALAWSARPDCSGFTNGHATLNALTARAAAELQNYELSQQLYIYSDAPEESATFLYKYASEHTNTDEHGLALTRVIVRYLGSENLNDARIVRAKFAQLAGWSSIEDGGDGKSNPPLANFCELLLKVCQLETKAAPLYQRICQVYEPELARDESLSPILTKLGTKYFGIQPPQPSGMASMMSSMLRGMMG 309
            MASL SL+KRYERSI N+DYYGAEQAC MMHHRLTQGK Q  + I++AL+ILLDASV LLS+KQAQAG++L L AV+HY++YK KVT+ESV+AL+KIADT+DPT+GN  EVRREKLR L+A+LAWS+R DC GF NGH TLNALTARAAAE++NYELSQQLY++SDAPEESATFLYKYASEHTN DE+GL LTRVI+RYL SENL DA  VR KF+QLAGWSSIE+GG G   PPL NFCELL+K+CQLE  A PLYQ+IC +Y+ EL RD+S++PIL ++GT+YFGIQPPQPSGMA MMS+MLRGMMG
Sbjct:    1 MASLKSLRKRYERSIENQDYYGAEQACRMMHHRLTQGKKQTNEDIEKALSILLDASVELLSRKQAQAGTALGLTAVKHYVDYKTKVTEESVAALQKIADTFDPTSGNSLEVRREKLRLLRASLAWSSREDCEGFPNGHPTLNALTARAAAEVENYELSQQLYLFSDAPEESATFLYKYASEHTNPDEYGLVLTRVIIRYLASENLKDACTVRIKFSQLAGWSSIENGGSGNHPPPLGNFCELLVKLCQLEKGAGPLYQKICMIYKNELHRDDSIAPILARIGTRYFGIQPPQPSGMAEMMSTMLRGMMG 309          
BLAST of Gcaud2157.t1 vs. uniprot
Match: A0A1X6NQH1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NQH1_PORUM)

HSP 1 Score: 124 bits (312), Expect = 3.290e-29
Identity = 109/355 (30.70%), Postives = 153/355 (43.10%), Query Frame = 0
Query:    1 MASLNSLQKRYERSIHNEDYYGAEQACIMMHHRLTQG-KNQAPDVIDRALNILLDASVTLLSKKQAQAGSSLALAAVRHY----------------------IEYKKKVTDESVSALRKIADTY-DPTAGNDAEVRREKLRFLKAALAWSAR----------PDCSGFTNG-----HATLNALTARAAAELQNYELSQQLYIYSDAPEESATFLYKYASEHTNTDEHGLALTRVIVRYL--------------------------GSENLNDARIVRAKFAQLAGWSSIEDGGDGKSNPPLANFCELLLKVCQLETKAAPLYQRICQVYEPELARDESLSPILTKLGTKYFGIQP 290
            M SL S +KR  R+    D+Y AEQA   ++HR + G + +AP     A   L   +  LL+ +Q  AG+S+ L  V H+                      + Y    TD ++ AL   AD Y DP    D   RRE LR+L+AA+A+S+           P  +G T G      A LNA    AAA   ++  + + Y +SD P   A  L  + S+     E  L LTR ++ YL                          G  NL DA  V   F +  GW +   G    + PPLANFC L L        AAPL+  + + Y   L RD +L  +LT++G  +FG+ P
Sbjct:    1 MTSLASAEKRVSRAFDASDWYAAEQAVRALYHRQSVGSRKEAPAPPSAAAATLRAGAEKLLAARQITAGTSIGLLLVEHWASGGPSSSXXXXXXXXXGGAGRVTYGADGTDVALLAL---ADAYGDPATDLDEAGRREYLRYLRAAIAYSSSLPAGXXXXXXPSTAGRTVGPTEFGDARLNARAGAAAAAAGDFPAATRFYTHSDDPAGHAAALLAW-SDTALASEAPLLLTRAVLTYLAGXXXXXXXXXXXXXXXXXXXXXPAVGDGNLADATAVYGAFVRGCGWPTAPYGS--AAAPPLANFCALTLAAAGRGAAAAPLWATLRETYAGSLGRDPALGGLLTRVGEVWFGVPP 349          
BLAST of Gcaud2157.t1 vs. uniprot
Match: A0A6P8HGT4_ACTTE (Golgi to ER traffic protein 4 homolog n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HGT4_ACTTE)

HSP 1 Score: 100 bits (249), Expect = 8.720e-21
Identity = 80/304 (26.32%), Postives = 143/304 (47.04%), Query Frame = 0
Query:    2 ASLNSLQKRYERSIHNEDYYGAEQACIMMHHRLTQGKNQAPDVIDRALNILLDASVTLLSKKQAQAGSSLALAAVRHYIEYKKKVTDESVSALRKIADTYDPTAGNDAEVRREKLRFLKAALAWSARPDCSGFTNGHATLNALTARAAAELQNYELSQQLYIYSDAPEESATFLYKYASEHTNTDEHGLALTRVIVRYLGSENLNDARIVRAKFAQLAGWSSIEDGGDGKSNPPLANFCELLLKVCQLETKAAPLYQRICQVYEPELARDESLSPILTKLGTKYFGIQPPQPSGMASMMSSMLR 305
              +  + ++  +SI    YY A Q    ++ R T  K       + A  +L + +   L  KQ  +G+ LAL  +  +   K++    S+  +  I   YDP    D + R+E   FL+ AL W+   D S    G+  L+   A+   + +NY  S+  ++Y+    + A  L ++A+      E  L +T+ ++++L   N N A IV  K+ +     S ++    K   PL NF  LLL   + +   + L+  +C+ Y+P L RD +    L ++   +FG+ PPQP+GM  +M  +++
Sbjct:   10 GGIQRVLQKLNKSIEEGSYYEAHQMIRTLYFRYTSQKKY-----NDAAELLHNGACLFLKHKQVGSGNDLALLMLECFKNSKQQADKTSLQKILSIFKLYDP---EDFQDRQE---FLQRALNWTKEVDPSQ-KYGNTDLHHECAKIYWQEKNYGESRYHFLYTHDGLQCAKMLIEFATTRGYPGEQDLFVTQTVLQFLCLPNANTANIVFLKYTEFHPEFSSQEPPFPK---PLLNFVWLLLSAIKRQGSLS-LFTVLCEKYQPTLERDPTYKIYLDRIAQLFFGLPPPQPTGMQGIMGGLMQ 297          
BLAST of Gcaud2157.t1 vs. uniprot
Match: A0A7S0G295_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G295_9RHOD)

HSP 1 Score: 95.5 bits (236), Expect = 1.110e-19
Identity = 72/223 (32.29%), Postives = 118/223 (52.91%), Query Frame = 0
Query:    1 MASLNSLQKRYERSIHNEDYYGAEQACIMMHHRLTQGKNQAPDVID-RALNILLDASVTLLSKKQAQAGSSLALAAVRHYIEYKKKVTDESVSALRKIADTY-DPTAGNDAEVRREKLRFLKAALAWS-ARPDCSGFTNGHATLNALTARAAAELQNYELSQQLYIYSDAPEESATFLYKYASEHTNTDEHGLALTRVIVRYLGSENLNDARIVRAKFAQLAG 220
            MASL SL+KR++ +I + D Y AEQ C  + HRL   ++    +   RA  +L   ++ LL     Q+G+SLAL  V + +        ES  +L +I + Y D    ++ EV  EKLRF+K+ + +S + PD +        LNA+ A ++   +++  +Q+ ++ SD PE+ A  L +++S +    E  L LTR ++ Y   +NL DA +V   F    G
Sbjct:    1 MASLASLEKRFDNAIESSDLYTAEQTCRTIAHRLRTTRDGDESLQHARAREVLESGALALLKLNGTQSGTSLALDYV-NALGTDHVPFSESKPSLLEIVNAYGDKELSDEGEV--EKLRFVKSCIDYSKSDPDNAELKVEDKELNAIAAMSSWARRDFGAAQKYFLVSDQPEKFAEMLLEWSSTYGLKSEVDLFLTRAVLEYALRKNLQDAAVVHIAFVSRYG 220          
BLAST of Gcaud2157.t1 vs. uniprot
Match: A7RJK2_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RJK2_NEMVE)

HSP 1 Score: 94.0 bits (232), Expect = 1.790e-18
Identity = 74/310 (23.87%), Postives = 141/310 (45.48%), Query Frame = 0
Query:    2 ASLNSLQKRYERSIHNEDYYGAEQACIMMHHRLTQGKNQAPDVIDRALNILLDASVTLLSKKQAQAGSSLALAAVRHYIEYKKKVTDESVSALRKIADTYDPTAGNDAEVRREKLRFLKAALAWSARPDCSGFTNGHATLNALTARAAAELQNYELSQQLYIYSDAPEESATFLYKYASEHTNTDEHGLALTRVIVRYLGSENLNDARIVRAKFAQLAGWSSIEDGGDGKSNPPLANFCELLLKVCQLETKAAPLYQRICQVYEPELARDESLSPILTKLGTKYFGIQPPQPSGMASMMSSMLRGMMGAT 311
              +  + ++  +SI   +YY A Q    ++ R T  K         A+ +L + ++     KQ  +G+ LA+  +      K  +  E +  +  I   +DP A  D +       F++ AL  +A  D S    G   L+ + AR   + +NY  S+  ++Y+    + A+ L ++A+      E  L +T+ +++YL  +N + A IV  KF      +   D        PL NF  LLL   + +   + ++  +C+ Y+P + RD +    L ++   +FG+ PPQP+G+  +M  +++ +   T
Sbjct:    8 GGIQRVLQKLNKSIEEGNYYEAHQMIRTLYFRYTSQKKYQD-----AIELLHNGTLLFFKYKQMGSGTDLAMLMLDCLKAGKDTIDSECLQKIISIFKAFDPEADTDRQ------EFIQKALRITADKDPSQ-KFGSTDLHHMCARIYWQEKNYGESRYHFLYTQDGFQCASMLVEFATTKGFKSEQDLFVTQTVLQYLCLQNSSTASIVFFKFT-----NKHPDFSGPPFQQPLLNFVWLLLMAIERQGPLS-MFTVLCEKYQPSIERDPTYKQYLDRIAQLFFGLPPPQPTGLQGIMGDLVQSLFNDT 299          
BLAST of Gcaud2157.t1 vs. uniprot
Match: A0A7M5XC60_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5XC60_9CNID)

HSP 1 Score: 80.5 bits (197), Expect = 1.340e-13
Identity = 72/310 (23.23%), Postives = 143/310 (46.13%), Query Frame = 0
Query:    2 ASLNSLQKRYERSIHNEDYYGAEQACIMMHHRL-TQGKNQAPDVIDRALNILLDASVTLLSKKQAQAGSSLALAAVRHYIEYKKKVTDESVSALRKIADTYDPTAGNDAEVRREKLRFLKAALAWSARPDCSGFTNGHATLNALTARAAAELQNYELSQQLYIYSDAPEESATFLYKYASEHTNTDEHGLALTRVIVRYLGSENLNDARIVRAKFAQLAGWSSIEDGGDGKSNP---PLANFCELLLKVCQLETKAAPLYQRICQVYEPELARDESLSPILTKLGTKYFGIQPPQPSGMASMMSSMLRGM 307
            + L+ +  +++  +   ++Y A      + HR  +Q KN+  +      N+L ++ +T L   Q ++   L     +  IE  + +  +  + + KI +    +     E    +  F+++AL+W+ +       +GH  L+   A+   E +NY  ++Q  I++      A+FL +Y        E  L +T+ ++++L    L    I  A F+    +++   G   +S+P   PL NF   LL    +E      +  +C+ Y+P + RD + S  L K+G  +FG+ PPQ SGM  M+ +++  +
Sbjct:   18 SRLDRIHHKFKAKVDGGNFYEASHMIKTLFHRYKSQKKNEDAE------NVLYESIITFLQHDQNESAYELG----KLLIELYQSIDHDIETGIGKILEIIKKST----EGSPSRADFIESALSWTTKDH----KHGHVRLHEAVAQKYWEEKNYSSARQHIIHTTNGSLCASFLIEYHVVVGFPGEIDLFVTQAVLQFLC---LRKILIANATFSN---YTAKHPGIKRQSHPFNQPLLNFIAFLLLA--VEKGNIEQFSLLCEKYQPSIHRDPTYSAYLDKIGQLFFGLPPPQRSGMDGMIGNLMESL 301          
BLAST of Gcaud2157.t1 vs. uniprot
Match: A0A7S2C3T6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C3T6_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 5.140e-11
Identity = 74/262 (28.24%), Postives = 125/262 (47.71%), Query Frame = 0
Query:   47 RALNILLDASVTLLSKKQAQAGSSLALAAVRHYIEYKKKVTDE-SVSALRKIADTYDPTAGNDAEVRR-EKLRFLKAALAWSARPDCSG-FTNGHATLNALTARAA-AELQNYELSQQLYIYSDAPEESATFLYKYASEHTNTDEHGLALTRVIVRYLGSENLNDARIVRAKFAQLAGWSSIEDGGDGKSNPPLANFCELLLKVCQLETKAAPLYQRICQVYEPELARDESLSPILTKLGTKYFGIQPPQPSGMASMMSSML 304
            +A  I  + ++ L S+  A +G+ +A+  V  Y      +  E S++A+ +I      +   D E    E++RFLKAAL+WSA  +  G +T G   ++AL   ++ A   + ++  +  +  + P+E A  L          D  GLA  R ++++L  ENL DA    A F  L            +++     F  L+++ CQ +  AA  +Q + Q +   + RD +    +  +G K+FGIQPPQ      MMS+ML
Sbjct:   90 KAQQISKEGALALFSRGYADSGAEMAMQLVEVYSSQDVSLDYETSIAAIIEIDRAMAGSTLPDGEPPVVERVRFLKAALSWSADVNEIGAYTLGDPRIHALLGASSWAAGDDVDVGVKHQVLGEVPDELAAALMNSGCGALKRD--GLAC-RAVLQFLAVENLRDAVSFLATFRSLV-----------ETDSRYTLFSALIIETCQHD--AAAEFQELTQTWAGLIERDPANKTAIRIVGQKFFGIQPPQ-----DMMSAML 330          
The following BLAST results are available for this feature:
BLAST of Gcaud2157.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3IUY2_9FLOR5.340e-16774.76Golgi to ER traffic protein 4-like n=1 Tax=Gracila... [more]
A0A1X6NQH1_PORUM3.290e-2930.70Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A6P8HGT4_ACTTE8.720e-2126.32Golgi to ER traffic protein 4 homolog n=1 Tax=Acti... [more]
A0A7S0G295_9RHOD1.110e-1932.29Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A7RJK2_NEMVE1.790e-1823.87Predicted protein n=2 Tax=Nematostella vectensis T... [more]
A0A7M5XC60_9CNID1.340e-1323.23Uncharacterized protein n=1 Tax=Clytia hemisphaeri... [more]
A0A7S2C3T6_9STRA5.140e-1128.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007317Golgi to ER traffic protein 4PFAMPF04190GET4coord: 46..304
e-value: 2.6E-46
score: 158.5
IPR007317Golgi to ER traffic protein 4PANTHERPTHR12875UNCHARACTERIZEDcoord: 8..307
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..309
e-value: 1.6E-60
score: 207.2
NoneNo IPR availablePANTHERPTHR12875:SF0GOLGI TO ER TRAFFIC PROTEIN 4 HOMOLOGcoord: 8..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1718_length_8829_cov_4.218585contigNODE_1718_length_8829_cov_4.218585:3316..4251 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2157.t1Gcaud2157.t1Gracilaria caudata M_176_S67 malemRNANODE_1718_length_8829_cov_4.218585 3316..4251 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2157.t1 ID=Gcaud2157.t1|Name=Gcaud2157.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=312bp
MASLNSLQKRYERSIHNEDYYGAEQACIMMHHRLTQGKNQAPDVIDRALN
ILLDASVTLLSKKQAQAGSSLALAAVRHYIEYKKKVTDESVSALRKIADT
YDPTAGNDAEVRREKLRFLKAALAWSARPDCSGFTNGHATLNALTARAAA
ELQNYELSQQLYIYSDAPEESATFLYKYASEHTNTDEHGLALTRVIVRYL
GSENLNDARIVRAKFAQLAGWSSIEDGGDGKSNPPLANFCELLLKVCQLE
TKAAPLYQRICQVYEPELARDESLSPILTKLGTKYFGIQPPQPSGMASMM
SSMLRGMMGAT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007317GET4
IPR011990TPR-like_helical_dom_sf