Gcaud2150.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2150.t1
Unique NameGcaud2150.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length400
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2150.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10Intergrase catalytic corecoord: 184..366
e-value: 1.2E-11
score: 46.7
IPR010998Integrase/recombinase, N-terminalGENE3D1.10.150.130coord: 72..179
e-value: 5.4E-6
score: 28.3
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 192..367
NoneNo IPR availableSUPERFAMILY47823lambda integrase-like, N-terminal domaincoord: 77..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_774_length_18304_cov_4.574150contigNODE_774_length_18304_cov_4.574150:4624..5823 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2150.t1Gcaud2150.t1Gracilaria caudata M_176_S67 malemRNANODE_774_length_18304_cov_4.574150 4624..5823 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2150.t1 ID=Gcaud2150.t1|Name=Gcaud2150.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=400bp
MAPAGMVLGGTSDGVEGYRAPQHIVRSPGCSENNQPELESITAGDEHMRI
KVLAASRLRHGQTSSTAIDRSARLLKDFGWSTRTGRSRDTQWRTYLDFCA
TDNRDPLPIAEAHLAARIGWITEEREASRRNISHSSLRQYILAIRQRQST
VLGIEVPPFPFIAHLLRAYQRWEEARHPQPTVRCGLPASAMQQIWELGMS
SCSIRTVRDAAMCLFAYSFNGLRESSVCSLRATACESCDLQLTCRLHVVK
GQQASTVSLVRFTATLSPSPLDLWARWNLIRSSNSRFFALADEPREWVPQ
SLSAALRRYLSALNITPSRGGKYSSHSLRIGTHTEQVLLGIPLEVRLSRF
GWGPNSAVMAQTYFDRTLMSSSASVWIFGAGSGLPAFQSKPGTASTPTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf
IPR010998Integrase_recombinase_N
IPR011010DNA_brk_join_enz