Gcaud2131.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2131.t1
Unique NameGcaud2131.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length510
Homology
BLAST of Gcaud2131.t1 vs. uniprot
Match: A0A2V3IQZ6_9FLOR (Phenylalanine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQZ6_9FLOR)

HSP 1 Score: 903 bits (2333), Expect = 0.000e+0
Identity = 439/509 (86.25%), Postives = 478/509 (93.91%), Query Frame = 0
Query:    1 MSTDVTVEEALLRSVEELNSASDFLESLPLATKLGTDHQTLVDGILKSLNAKLAIKLEPVTHNRWEISSEGLSYADTTSPEVAFFNAVREVLEVGGVPGLDQLEKKVSKQVMVRGKQQALRRKWVSIDKETKAFKLNDDVNVTDEVANALRKLRDQDGSPNGVSSVMLKDLKSRKLAALKPYKTFKIFPGERLVDARKNQATELTKEMLESGDWKSVAFKPYNFDAEGKQTNGGYLHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPEFANVMDRNYLERVRKVHEEGGFGSRGYRYEWSEQEARKNILRTHTTAVSSRMLYLLAQQKEFKPKKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGHLKGIIHEFFKKMGMSKLRFKPTHNPYTTPSLEIHSYHEGLKKWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGIRNIRDLFGHKVDLKAIQTNPICRLTF 509
            MSTDV+ EEALLRSVEEL +ASDFL+S  +A KLG  H  LVDG+LKSLNAKLAI+LEPVTHNRWEIS+EG++YADTTSPEVAF+N V+E+++ G +   DQ+EKK++KQV+ RGKQQALRRKW++IDK TKAF LNDD  V D+VA+ALR LRDQDG+P+G+ S MLK LKSRKLA+LKP+KTFKIF GERL DARK QATELTK+MLESG WKSVAFKPYNF+AEGK T+GGYLHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPE+ANV DR+YLE+VR+VHEEGGFGSRGYRY+WSE+EARKNILRTHTTAVSSRMLYLLAQ+KEFKPKKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGHLKGIIHEFFKKMGMSKLRFKPTHNPYTTPSLEIHSYHEGLKKWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYG+RNIRDLFGHKVDLKAIQTNPICRLTF
Sbjct:    1 MSTDVSTEEALLRSVEELGNASDFLDSPSVARKLGIGHAALVDGLLKSLNAKLAIRLEPVTHNRWEISAEGITYADTTSPEVAFYNTVKEIVDAGQLCMPDQIEKKLAKQVLARGKQQALRRKWIAIDKGTKAFLLNDDAQVVDDVADALRTLRDQDGAPDGLPSDMLKTLKSRKLASLKPFKTFKIFEGERLADARKEQATELTKDMLESGQWKSVAFKPYNFNAEGKPTSGGYLHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPEYANVPDRDYLEKVRRVHEEGGFGSRGYRYDWSEEEARKNILRTHTTAVSSRMLYLLAQEKEFKPKKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGHLKGIIHEFFKKMGMSKLRFKPTHNPYTTPSLEIHSYHEGLKKWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGVRNIRDLFGHKVDLKAIQTNPICRLTF 509          
BLAST of Gcaud2131.t1 vs. uniprot
Match: R7QP70_CHOCR (Phenylalanine--tRNA ligase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QP70_CHOCR)

HSP 1 Score: 796 bits (2057), Expect = 1.420e-287
Identity = 391/509 (76.82%), Postives = 439/509 (86.25%), Query Frame = 0
Query:    1 MSTDVTVEEALLRSVEELNSASDFLESLPLATKLGTDHQTLVDGILKSLNAKLAIKLEPVTHNRWEISSEGLSYADTTSPEVAFFNAVREVLEVGGVPGLDQLEKKVSKQVMVRGKQQALRRKWVSIDKETKAFKLNDDVNVTDEVANALRKLRDQDGSPNGVSSVMLKDLKSRKLAALKPYKTFKIFPGERLVDARKNQATELTKEMLESGDWKSVAFKPYNFDAEGKQTNGGYLHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPEFANVMDRNYLERVRKVHEEGGFGSRGYRYEWSEQEARKNILRTHTTAVSSRMLYLLAQQKEFKPKKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGHLKGIIHEFFKKMGMSKLRFKPTHNPYTTPSLEIHSYHEGLKKWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGIRNIRDLFGHKVDLKAIQTNPICRLTF 509
            M+  V  EEA+LR+VEEL  A D+L+S  L++KL   H TLVDG+LKSL A+ AI+LE VTH RW++++EGLSYAD  SPE    + V   +E G     +++++ + KQV  RG+QQAL+++WV+I K  K F   +  +V D+VA ALR LRDQ G+P G+ S +LK LKSRKLAALKPYKT+KIF GERL DAR+ QATELT+ MLE+ +WK ++FK YNF AEGK TNGG LHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPE ANV+DR+YLERVR+ HEEGGFGSRGYRYEWSEQEARKNILRTHTTAVSSRMLYLLAQ+ EFKP+KYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLG LKGIIHEFFKKMGMS+LRFKPTHNPYTTPSLEIHSYHEGL KWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGI NIRDLFGH+VDLKAIQTNP+CRLTF
Sbjct:    1 MAAPVEKEEAVLRAVEELAVADDYLDSSNLSSKLSVAHATLVDGVLKSLLARAAIRLETVTHERWQVAAEGLSYADAGSPEQRLHSFVVTCVEEGSAATFEKVDQALGKQVAARGRQQALKKRWVAIQKADKVFVPVEGADVVDDVAEALRTLRDQGGNPEGLQSDILKQLKSRKLAALKPYKTYKIFKGERLADARRVQATELTRTMLETDEWKDISFKGYNFKAEGKPTNGGCLHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPELANVLDRDYLERVRRTHEEGGFGSRGYRYEWSEQEARKNILRTHTTAVSSRMLYLLAQETEFKPRKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGDLKGIIHEFFKKMGMSRLRFKPTHNPYTTPSLEIHSYHEGLGKWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGIDNIRDLFGHRVDLKAIQTNPLCRLTF 509          
BLAST of Gcaud2131.t1 vs. uniprot
Match: UPI001E1DFEA8 (LOW QUALITY PROTEIN: phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DFEA8)

HSP 1 Score: 719 bits (1857), Expect = 4.610e-257
Identity = 361/515 (70.10%), Postives = 420/515 (81.55%), Query Frame = 0
Query:    2 STDVTVEEALLRSVEELNS---ASDFLESLPLATKLGTDHQTLVDGILKSLNAKLAIKLEPVTHNRWEISSEGLSYADTTSPEVAFFNAVREVLEVGGVP---GLDQLEKKVSKQVMVRGKQQALRRKWVSIDKETKAFKLND-DVNVTDEVANALRKLRDQDGSPNGVSSVMLKDLKSRKLAALKPYKTFKIFPGERLVDARKNQATELTKEMLESGDWKSVAFKPYNFDAEGKQTNGGYLHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPEFANVMDRNYLERVRKVHEEGGFGSRGYRYEWSEQEARKNILRTHTTAVSSRMLYLLAQQKEFKPKKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGHLKGIIHEFFKKMGMSKLRFKPTHNPYTTPSLEIHSYHEGLKKWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGIRNIRDLFGHKVDLKAIQTNPICRLTF 509
            S+   V + +L  +E  ++   ASD LES+ LA+K    H  LVD  LKSL AK A +LEPV+H+RWE+S+EG +YA   SPE   F  +     V   P     + L  K+  +   RG QQAL+RKWV+ID+ETK + L D    V D ++ AL+ L+  DGSP GVS+  LK+LK+RKLAA KP+KT++IFPG R+ +AR  QATELT+E+LES  W+S+ FK YNF+A+GK T+GG+LHTLLKVREQFR IFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPE AN+ D NY+ RV+K HE GGFGSRGYRY+WSE EARKNILRTHTTAVSSRMLYLLAQ+KEFKP+KYF IDRVFRNETLDATHLAEFHQIEGLVA RNLSLGHLKGIIHEFFKKMG+SK+RFKPTHNPYTTPSLEIHSYHEG+ KWVEVGNSG+FRPEM+RPMGIPEDVTVIAWGLSLERPTMI+YG +NIRDLFGHKVD++AIQ+NP+CRL F
Sbjct:    5 SSSKDVRDLILTVLESESAGPTASDGLESVALASKFHVTHAALVDDFLKSLVAKEAARLEPVSHDRWELSTEGETYARAGSPEFNVFQVL-----VSHAPERLSKEALVDKLGLETANRGLQQALKRKWVTIDRETKCYGLVDASKKVCDTISEALQNLKLSDGSPEGVSADSLKELKARKLAASKPFKTYRIFPGNRIGEARAVQATELTRELLESNQWESIVFKDYNFEADGKPTDGGHLHTLLKVREQFRGIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPELANLPDPNYVTRVKKTHECGGFGSRGYRYKWSEIEARKNILRTHTTAVSSRMLYLLAQEKEFKPRKYFXIDRVFRNETLDATHLAEFHQIEGLVAGRNLSLGHLKGIIHEFFKKMGISKIRFKPTHNPYTTPSLEIHSYHEGMGKWVEVGNSGIFRPEMLRPMGIPEDVTVIAWGLSLERPTMIKYGYKNIRDLFGHKVDIQAIQSNPLCRLGF 514          
BLAST of Gcaud2131.t1 vs. uniprot
Match: A0A7S0BM37_9RHOD (Phenylalanine--tRNA ligase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BM37_9RHOD)

HSP 1 Score: 644 bits (1662), Expect = 1.750e-227
Identity = 325/511 (63.60%), Postives = 392/511 (76.71%), Query Frame = 0
Query:    1 MSTDVTVEEALLRSVEELNSASD--FLESLPLATKLGTDHQTLVDGILKSLNAKLAIKLEPVTHNRWEISSEGLSYADTTSPEVAFFNAVREVLEVGGVPGLDQLEKKVSKQVMVRGKQQALRRKWVSIDKETKAFKLNDDVNVTDEVANALRKLRDQDGSPNGVSSVMLKDLKSRKLAALKPYKTFKIFPGERLVDARKNQATELTKEMLESGDWKSVAFKPYNFDAEGKQTNGGYLHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPEFANVMDRNYLERVRKVHEEGGFGSRGYRYEWSEQEARKNILRTHTTAVSSRMLYLLAQQKEFKPKKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGHLKGIIHEFFKKMGMSKLRFKPTHNPYTTPSLEIHSYHEGLKKWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGIRNIRDLFGHKVDLKAIQTNPICRLTF 509
            +S +   EE+L   VE L    D  ++ES  LA ++G DHQ LVD  LK+L A+ A+  E +TH+ W++S EG  YA+  +PE   F+ +   +       LD+L++K+     + G QQA+++KW+ +DK TK      D  V DEVA+ LRKL   D +  G++   LK LKSRKL A KPYKT+K+       DA K QATELT+EMLESG+WK ++FK YNF+A GK   GG LH LLKVREQFR +FLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARD HDTFFLS PE + V +++Y  RV+K HEEGG+GS GYRY+WSEQEA+KN+LRTHTTAVSSRML  L    EF+PKKYFSIDRVFRNETLDATHLAEFHQIEG++AD++LSLGHLKGI+H FF+K+GM KLRFKP HNPYT PS+EI SYHEGLKKWVEVGNSG+FRPEM++PMG+PEDVTVIAWGLSLERPTMI YGI NIR+LFGHKVDL+ ++ NPICRLTF
Sbjct:   12 VSMESGAEESL---VEYLRGRPDEAWIESSTLAEEIGLDHQVLVDSALKALTARGAVLTETITHSCWKLSDEGQKYAENGTPEARVFDVLASPMT------LDELKEKLGNDSSI-GMQQAMKKKWIVMDKGTKTLSRKVDTAV-DEVADILRKLA-VDSAGQGLAEKDLKVLKSRKLVAYKPYKTYKVKKSNMFDDATKKQATELTREMLESGEWKDLSFKSYNFEALGKAPEGGSLHPLLKVREQFRSLFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDAHDTFFLSAPELSKVENQDYWNRVQKTHEEGGYGSIGYRYKWSEQEAKKNVLRTHTTAVSSRMLEKLGSAGEFQPKKYFSIDRVFRNETLDATHLAEFHQIEGVIADKSLSLGHLKGILHLFFQKLGMPKLRFKPAHNPYTEPSMEIFSYHEGLKKWVEVGNSGIFRPEMLQPMGLPEDVTVIAWGLSLERPTMILYGISNIRELFGHKVDLEKVKRNPICRLTF 510          
BLAST of Gcaud2131.t1 vs. uniprot
Match: A0A5J4YT81_PORPP (Phenylalanine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YT81_PORPP)

HSP 1 Score: 590 bits (1521), Expect = 3.900e-206
Identity = 306/504 (60.71%), Postives = 365/504 (72.42%), Query Frame = 0
Query:    8 EEALLRSVEELNSASDFLESLPLATKLGTDHQTLVDGILKSLNAKLAIKLEPVTHNRWEISSEGLSYADTTSPEVAFFNAVREVLEVGGVPGLDQLEKKVSKQVMVRGKQQALRRKWVSIDKETKAFKLNDDVNVTDEVANALRKLRDQDGSPNGVSSVMLKDLKSRKLAALKPYKTFKIFPGERLVDARKNQATELTKEMLESGDWKSVAFKPYNFDAEGKQTNGGYLHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPEFANVMDRNYLERVRKVHEEGGFGSRGYRYEWSEQEARKNILRTHTTAVSSRMLYLLAQQKE----FKPKKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGHLKGIIHEFFKKMGMSKLRFKPTHNPYTTPSLEIHSYHEGLKKWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGIRNIRDLFGHKVDLKAIQTNPICRL 507
            EEA +R  E    A   + S  LA +L  +H T VD +LK L A+  +  E V+H    ++ EG  Y    SPE  +F AV+   E    P +  L +++S  +   G Q A+++KW+ +DK +K       V V DEVAN L  L   D +   +    LK+LK RKL  +K  KTF I  G R  DARK QA ELT EML+SG W+  AFK YNF AEG+    G LH LLKVREQFR+IF+++GFEEMPT+NYVESSFWNFDALFQPQQHPARD HDTFFLS P  A V +  YLERVR+VH+ GG+GS GY+Y+WS++EA KNILRTHTTAVSSRMLY LA+Q E    F P+KYFSIDRVFRNETLDATHLAEFHQIEGLVA  NLSL  LKG+I EFFK+MGM+KLRFKP HNPYT PS+EI SYH+GL+KWVEVGNSG+FRPEM+RPMG+P DV VIAWGLSLERPTMI YGI+NIRDLFGHKVD+ AI+ NP+CR+
Sbjct:    5 EEATVRYFES-RPADARVGSRDLAAELEIEHATFVDSVLKRLTARDVLAAEAVSHQTVSLTGEGEQYRKDGSPEFQYFRAVQRAAEP---PSVQVLGEQLSDAIAKVGMQNAMKKKWIVLDKASKTLSCAAQV-VEDEVANVLATLALDDAATQ-LPEEQLKELKQRKLVVVKMAKTFDITRGPRFDDARKVQAAELTSEMLQSGAWEHAAFKAYNFAAEGRAPEYGCLHPLLKVREQFRMIFVQLGFEEMPTDNYVESSFWNFDALFQPQQHPARDAHDTFFLSSPATARVEEEAYLERVREVHQSGGYGSLGYQYKWSKEEACKNILRTHTTAVSSRMLYDLARQTERDGHFTPRKYFSIDRVFRNETLDATHLAEFHQIEGLVAAPNLSLADLKGVIGEFFKRMGMTKLRFKPAHNPYTEPSMEIFSYHDGLQKWVEVGNSGIFRPEMLRPMGLPADVRVIAWGLSLERPTMIMYGIKNIRDLFGHKVDIAAIRVNPVCRM 502          
BLAST of Gcaud2131.t1 vs. uniprot
Match: A0A1X6PC23_PORUM (Phenylalanine--tRNA ligase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PC23_PORUM)

HSP 1 Score: 585 bits (1508), Expect = 7.670e-204
Identity = 310/525 (59.05%), Postives = 368/525 (70.10%), Query Frame = 0
Query:    7 VEEALLRSVEELNSASDFLESLPLATKLGTDHQTLVDGILKSLNAKLAIKLEPVTHNRWEISSEGLSYADTTSPEVAFFNAVREVLEVGGVPGLDQLEKKVSKQVMVRGKQQALRRKWVSIDKETKAFKL----NDDVNVTDEVANALRKLRDQDG-----SPNGVSSVMLKDLKSRKLAALKPYKTFKIFPGERLVDARKNQATELTKEMLESGDWKSVAFKPYNFDAEGKQTNGGYLHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPEFANVMDR--NYLERVRKVH---EEGGF---GSRGYRYEWSEQEARKNILRTHTTAVSSRMLYLLAQQKE-----FKPKKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGHLKGIIHEFFKKMGMSKLRFKPTHNPYTTPSLEIHSYHEGLKKWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGIRNIRDLFGHKVDLKAIQTNPICRLTF 509
            +E A+L +V    +  + + S  +A   G  H  LVD  LK+L+A+ A+ L PV+H  W +++EG +YA   SPE      VR +    G   L  ++  +   V   G QQA+R  WV +D+ TK   L    + D   TD+VA AL  LRD  G     +  GV     K L+ RKLA  K  KTF I PG R+ DAR+ QATEL++EML+SG W+  AFKPYNF A+GK   GG+LHTLLKVREQFRLIFLEMGF EM +  YVESSFWNFDALFQPQQHPARDEHDTFFLS P  A + +   +Y+ RV+  H   E G     GSRGYRY WS  EARKNILRTHTTAV++RML  LA         F P K FSIDRVFRNETLDATHLAEFHQIEG+VAD NLSLGHLKG+IH FFKKMGM +LRFKPTHNPYT PSLE+H++H GL KWVEVGNSG+FRPEM+ PMG+P DV VIAWGLSLERPTMI+YG++NIRDLFGHK+DL+AIQ NPICR+TF
Sbjct:    8 LESAVLDAVTA--AGGEAVASTDVAASQGVPHSVLVDTALKTLSAREALTLTPVSHEAWVLTAEGATYAAAGSPEAQL---VRHLAAATGGQSLPNVDAALGAGVRKIGMQQAMRLGWVVMDRPTKTLALGAGLSADALPTDDVAAALNTLRDGGGDAAAAAATGVDEATRKALQKRKLATPKTTKTFAITPGARIADARRPQATELSREMLDSGSWRGAAFKPYNFAAKGKDVAGGHLHTLLKVREQFRLIFLEMGFSEMDSARYVESSFWNFDALFQPQQHPARDEHDTFFLSSPATATLPEGAGDYVARVKAAHCGGEAGAAVTGGSRGYRYAWSAAEARKNILRTHTTAVTARMLQRLAADTASAGGVFTPAKMFSIDRVFRNETLDATHLAEFHQIEGMVADHNLSLGHLKGVIHTFFKKMGMDRLRFKPTHNPYTEPSLEVHAFHAGLNKWVEVGNSGMFRPEMLLPMGLPPDVRVIAWGLSLERPTMIKYGVQNIRDLFGHKIDLEAIQRNPICRITF 527          
BLAST of Gcaud2131.t1 vs. uniprot
Match: A0A1U7YY94_NELNU (Phenylalanine--tRNA ligase n=5 Tax=Mesangiospermae TaxID=1437183 RepID=A0A1U7YY94_NELNU)

HSP 1 Score: 557 bits (1435), Expect = 2.310e-193
Identity = 286/500 (57.20%), Postives = 356/500 (71.20%), Query Frame = 0
Query:    8 EEALLRSVEELNSASDFLESLPLATKLGTDHQTLVDGILKSLNAKLAIKLEPVTHNRWEISSEGLSYADTTSPEVAFFNAVREVLEVGGVPGLDQLEKKVSKQVMVRGKQQALRRKWVSIDKETKAFKLNDDVNVTDEVANALRKLRDQDGSPNGVSSVMLKDLKSRKLAALKPYKTFKIFPGERLVDARKNQATELTKEMLESGDWKSVAFKPYNFDAEGKQTNGGYLHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPEFANVMDRNYLERVRKVHEEGGFGSRGYRYEWSEQEARKNILRTHTTAVSSRMLYLLAQQKEFKPKKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGHLKGIIHEFFKKMGMSKLRFKPTHNPYTTPSLEIHSYHEGLKKWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGIRNIRDLFGHKVDLKAIQTNPICRL 507
            E+A+L  +E+    +D   S   A+ +G DH  +V+ ++KSL+    +  E +   +W ++ EG SY    SPEV  F AV       G+   ++L+KKV   V   G  QA++ KW+ + K   + K+     V D+V + L  LR QDG    V    +  LK RKL AL+ +K++ +  G      RK  AT+LT+E L+ GDWK + FK YNF A+G+   GG+LH LLKVR+Q ++IFL+MGFEEMPTNN+VESSFWNFDALFQPQQHPARD HDTFFL  P     +  +Y+ERV++VHE GG+GSRGY Y+W  +EA KN+LRTHTTAVSSRMLYLLAQ K F PKKYFSIDRVFRNE +D THLAEFHQIEGLV DR L+LG L G++H+FF ++GMSKLRFKP +NPYT PS+EI SYHEG KKWVE+GNSG+FRPEM+ PMG+PEDV VIAWGLSLERPTMI YGI NIRDLFGHKVDL  I+ NPICRL
Sbjct:    3 EDAILGFLEKNEKIAD---SGKFASNIGIDHNEIVN-VIKSLHGFRLVDAEDIKREKWVLTDEGKSYTVAGSPEVQLFLAVPPE----GI-SREELQKKVDPSVYKIGCSQAIKNKWLEMGKAQVSRKVQ---QVEDQVKDLL--LRIQDGE--AVDQGDIDALKKRKLIALQTWKSYSLTKGPNYAPKRKKVATDLTREHLQRGDWKDLEFKEYNFSAKGQPAEGGHLHPLLKVRKQLQMIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLQVPSTTKKLPEDYVERVKRVHESGGYGSRGYGYDWKREEANKNLLRTHTTAVSSRMLYLLAQ-KPFAPKKYFSIDRVFRNEAVDRTHLAEFHQIEGLVCDRGLTLGDLIGVLHDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGFKKWVEIGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGIDNIRDLFGHKVDLSLIKRNPICRL 485          
BLAST of Gcaud2131.t1 vs. uniprot
Match: A0A6P6VU93_COFAR (Phenylalanine--tRNA ligase n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6VU93_COFAR)

HSP 1 Score: 551 bits (1420), Expect = 5.200e-191
Identity = 278/500 (55.60%), Postives = 354/500 (70.80%), Query Frame = 0
Query:    8 EEALLRSVEELNSASDFLESLPLATKLGTDHQTLVDGILKSLNAKLAIKLEPVTHNRWEISSEGLSYADTTSPEVAFFNAVREVLEVGGVPGLDQLEKKVSKQVMVRGKQQALRRKWVSIDKETKAFKLNDDVNVTDEVANALRKLRDQDGSPNGVSSVMLKDLKSRKLAALKPYKTFKIFPGERLVDARKNQATELTKEMLESGDWKSVAFKPYNFDAEGKQTNGGYLHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPEFANVMDRNYLERVRKVHEEGGFGSRGYRYEWSEQEARKNILRTHTTAVSSRMLYLLAQQKEFKPKKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGHLKGIIHEFFKKMGMSKLRFKPTHNPYTTPSLEIHSYHEGLKKWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGIRNIRDLFGHKVDLKAIQTNPICRL 507
            EEA+LR +E+    SD   S   A   G  H  +++ I+KSLN    +  + +   RW ++ EG  YA+  SPEV  F A+       G+   D L+KK+   +   G QQA++ KW+ + K   + K+     V D++   L ++++ +     VSS  +  LK RKL   + +K + +  G +    RK  AT+LT+E ++ GDWK + FK YNF A+G+   GG+LH LLKVR Q ++IFL+MGFEEMPTNN+VESSFWNFDALFQPQQHPARD HDTFFL +P     +  +Y++RV++VHE GG+GSRGY YEW  +EA KN+LRTHTTAVSSRMLYLLAQ K F PKKY+SIDRVFRNE +D THLAEFHQIEG++ DR L+L  L G++HEFF ++GMSKLRFKP +NPYT PS+EI SYHEG KKWVEVGNSG+FRPEM++PMG+PEDV VIAWGLSLERPTMI YGI NIRDLFGHKVDL  I+ NP+CRL
Sbjct:    3 EEAVLRYLEKNEEISD---SGKFAEDRGLSHDDILN-IIKSLNGFRLVDAQDIKKERWVLTDEGKKYAEAGSPEVQLFLAI----PAEGIARED-LQKKLESSIFKIGSQQAIKNKWIEMGKSQVSRKVQ---QVEDKIKILLLQIQNGEA----VSSEDIDALKRRKLITQQIWKGYSVRKGPKYAPKRKKAATDLTRENIQRGDWKELEFKEYNFSAKGQPLEGGHLHPLLKVRRQVQMIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLKEPSTTKTLPEDYVDRVKEVHENGGYGSRGYGYEWKREEANKNLLRTHTTAVSSRMLYLLAQ-KPFAPKKYYSIDRVFRNEAVDRTHLAEFHQIEGVMCDRGLALSDLIGVLHEFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMFRPEMLQPMGLPEDVQVIAWGLSLERPTMILYGIDNIRDLFGHKVDLGLIKRNPVCRL 485          
BLAST of Gcaud2131.t1 vs. uniprot
Match: A0A0C9S919_9SPER (Phenylalanine--tRNA ligase n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9S919_9SPER)

HSP 1 Score: 548 bits (1413), Expect = 5.030e-190
Identity = 281/501 (56.09%), Postives = 352/501 (70.26%), Query Frame = 0
Query:    8 EEALLRSVEELNSASDFLESLPLATKLGTDHQTLVDGILKSLNAKLAIKLEPVTHNRWEISSEGLSYADTTSPEVAFFNAVREVLEVGGVPGLDQLEKKVSKQVMVRGKQQALRRKWVSIDKETKAFKLNDDVNVTDEVANALRKLRD-QDGSPNGVSSVMLKDLKSRKLAALKPYKTFKIFPGERLVDARKNQATELTKEMLESGDWKSVAFKPYNFDAEGKQTNGGYLHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPEFANVMDRNYLERVRKVHEEGGFGSRGYRYEWSEQEARKNILRTHTTAVSSRMLYLLAQQKEFKPKKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGHLKGIIHEFFKKMGMSKLRFKPTHNPYTTPSLEIHSYHEGLKKWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGIRNIRDLFGHKVDLKAIQTNPICRL 507
            EEA+L     L S  +  +S   A   G DH  L+  ++KSLN    +  + +   +W ++ EG +YA++ SPEV FF A+       G+P  ++L++KV+  V   G  QA++ KWV + K   + K+    NV D V   L K+R+ Q+  P  + +     LK RKL AL+ +K + +  G      R    T+LT+E L+ G W+ + FK YNF+A G+   GG+LH LLKVR QFR IFLEMGFEEMPTNN+VESSFWNFD LFQPQQHPARD HDTFFL  P     +  +YL++V+ VHE GG+GSRGY Y+W  +EA KN+LRTHTTAVSSRMLY LAQ K F PK+YFSIDRVFRNE +D THLAEFHQIEGLV DR L+LG L G++ +FF ++G++KLRFKP +NPYT PS+EI SYHEG KKWVEVGNSG+FRPEM+ PMG+PEDV+VIAWGLSLERPTMI YGI NIRDLFGHKVDL  I+TNPICRL
Sbjct:    3 EEAVLGY---LQSHDEIPDSGEFAVSSGVDHSELL-SVIKSLNGFRLVDAKDIKREKWVLTEEGQTYANSGSPEVQFFLAIPPE----GIPR-EELQRKVNGSVYKIGSSQAIKNKWVELGKLLVSRKVE---NVEDRVRELLIKIREGQEVDPKDIDA-----LKKRKLIALQTWKGYSLRKGPNYAPKRMKATTDLTREQLQKGTWQGLEFKEYNFNALGQPAEGGHLHPLLKVRAQFREIFLEMGFEEMPTNNFVESSFWNFDVLFQPQQHPARDSHDTFFLKVPANTQRLPEDYLQKVKNVHESGGYGSRGYGYDWKREEAEKNLLRTHTTAVSSRMLYALAQ-KPFTPKRYFSIDRVFRNEAVDRTHLAEFHQIEGLVCDRGLALGDLIGVLQDFFSRLGVTKLRFKPAYNPYTEPSMEIFSYHEGFKKWVEVGNSGMFRPEMLLPMGLPEDVSVIAWGLSLERPTMILYGIDNIRDLFGHKVDLNLIKTNPICRL 485          
BLAST of Gcaud2131.t1 vs. uniprot
Match: A0A5J5B6L8_9ASTE (Phenylalanine--tRNA ligase n=3 Tax=Nyssaceae TaxID=4289 RepID=A0A5J5B6L8_9ASTE)

HSP 1 Score: 546 bits (1407), Expect = 4.080e-189
Identity = 282/500 (56.40%), Postives = 358/500 (71.60%), Query Frame = 0
Query:    8 EEALLRSVEELNSASDFLESLPLATKLGTDHQTLVDGILKSLNAKLAIKLEPVTHNRWEISSEGLSYADTTSPEVAFFNAVREVLEVGGVPGLDQLEKKVSKQVMVRGKQQALRRKWVSIDKETKAFKLNDDVNVTDEVANALRKLRDQDGSPNGVSSVMLKDLKSRKLAALKPYKTFKIFPGERLVDARKNQATELTKEMLESGDWKSVAFKPYNFDAEGKQTNGGYLHTLLKVREQFRLIFLEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPEFANVMDRNYLERVRKVHEEGGFGSRGYRYEWSEQEARKNILRTHTTAVSSRMLYLLAQQKEFKPKKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGHLKGIIHEFFKKMGMSKLRFKPTHNPYTTPSLEIHSYHEGLKKWVEVGNSGVFRPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGIRNIRDLFGHKVDLKAIQTNPICRL 507
            E+A+L  +E+     D   S   A + G +H  LV+ ++KSL+    +  + +   RW ++ EG +YA T SPEV FF A+       G+P  ++L++K++  V   G+ QA++ +WV + K+    K+   +NV D V + L  LR QDG    ++   +  LK RKL A + +K + I  G      RK  AT+LT++ L+ GDWK + FK YNF A+G+ T GG+LH LLKVR+Q +LIFL+MGFEEMPTNN+VESSFWNFDALFQPQQHPARD HDTFFL  P    ++  +Y+ERV+ VHE GG+ SRGY Y+W  +EA KN+LRTHTTAVS+RMLYLLAQ K F PKKY+SIDRVFRNE +D THLAEFHQIEGLV DR L+LG LKG++ EFF ++GMSKLRFKP +NPYT PS+EI  +HEGL KWVE+GNSG+FRPEM+ PMG+PEDV VIAWGLSLERPTMI Y I NIRDLFGHKVDL  I+ NPICRL
Sbjct:    3 EKAVLGFLEKNEGIPD---SGQFAAECGINHDELVN-VIKSLHGFGFVDSQDIKRERWVLTDEGRAYAATGSPEVQFFLAI----PTEGIPP-EELQRKLNPSVFRIGRSQAMKNQWVEMGKQRVTRKV---LNVEDTVKDLL--LRVQDGQ--AINPEDIDALKRRKLIAPQIWKGYSIRKGTNYAPERKKAATDLTRDHLQRGDWKELEFKEYNFSAKGQPTEGGHLHPLLKVRQQLQLIFLQMGFEEMPTNNFVESSFWNFDALFQPQQHPARDSHDTFFLQVPSTTKMLPEDYVERVKHVHELGGYESRGYGYDWKREEANKNLLRTHTTAVSTRMLYLLAQ-KPFAPKKYYSIDRVFRNEAVDRTHLAEFHQIEGLVCDRGLTLGDLKGVLKEFFSRLGMSKLRFKPAYNPYTEPSMEIFGFHEGLNKWVEIGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYKIDNIRDLFGHKVDLGLIKRNPICRL 485          
The following BLAST results are available for this feature:
BLAST of Gcaud2131.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQZ6_9FLOR0.000e+086.25Phenylalanine--tRNA ligase n=1 Tax=Gracilariopsis ... [more]
R7QP70_CHOCR1.420e-28776.82Phenylalanine--tRNA ligase n=1 Tax=Chondrus crispu... [more]
UPI001E1DFEA84.610e-25770.10LOW QUALITY PROTEIN: phenylalanine--tRNA ligase al... [more]
A0A7S0BM37_9RHOD1.750e-22763.60Phenylalanine--tRNA ligase n=1 Tax=Rhodosorus mari... [more]
A0A5J4YT81_PORPP3.900e-20660.71Phenylalanine--tRNA ligase n=1 Tax=Porphyridium pu... [more]
A0A1X6PC23_PORUM7.670e-20459.05Phenylalanine--tRNA ligase n=1 Tax=Porphyra umbili... [more]
A0A1U7YY94_NELNU2.310e-19357.20Phenylalanine--tRNA ligase n=5 Tax=Mesangiospermae... [more]
A0A6P6VU93_COFAR5.200e-19155.60Phenylalanine--tRNA ligase n=2 Tax=Coffea TaxID=13... [more]
A0A0C9S919_9SPER5.030e-19056.09Phenylalanine--tRNA ligase n=1 Tax=Wollemia nobili... [more]
A0A5J5B6L8_9ASTE4.080e-18956.40Phenylalanine--tRNA ligase n=3 Tax=Nyssaceae TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.2330coord: 80..140
e-value: 1.1E-35
score: 124.8
NoneNo IPR availableGENE3D1.10.10.2320coord: 67..177
e-value: 1.1E-35
score: 124.8
NoneNo IPR availableGENE3D3.30.1370.240coord: 17..220
e-value: 1.1E-35
score: 124.8
NoneNo IPR availablePANTHERPTHR11538:SF40PHENYLALANINE--TRNA LIGASE ALPHA SUBUNITcoord: 16..507
NoneNo IPR availablePANTHERPTHR11538PHENYLALANYL-TRNA SYNTHETASEcoord: 16..507
NoneNo IPR availableCDDcd00496PheRS_alpha_corecoord: 237..495
e-value: 9.8358E-111
score: 325.654
IPR002319Phenylalanyl-tRNA synthetasePFAMPF01409tRNA-synt_2dcoord: 222..497
e-value: 4.1E-92
score: 308.1
IPR040724PheRS, DNA binding domain 1PFAMPF18552PheRS_DBD1coord: 6..65
e-value: 2.8E-8
score: 33.4
IPR040725PheRS, DNA binding domain 3PFAMPF18553PheRS_DBD3coord: 79..139
e-value: 4.8E-6
score: 26.7
IPR045864Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)GENE3D3.30.930.10Bira Bifunctional Protein; Domain 2coord: 237..509
e-value: 8.2E-115
score: 384.7
IPR045864Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)SUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 223..496
IPR004529Phenylalanyl-tRNA synthetase, class IIc, alpha subunitTIGRFAMTIGR00468TIGR00468coord: 195..495
e-value: 2.1E-109
score: 363.6
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 241..503
score: 17.602686

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_116_length_48691_cov_4.274671contigNODE_116_length_48691_cov_4.274671:6037..7566 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2131.t1Gcaud2131.t1Gracilaria caudata M_176_S67 malemRNANODE_116_length_48691_cov_4.274671 6037..7566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2131.t1 ID=Gcaud2131.t1|Name=Gcaud2131.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=510bp
MSTDVTVEEALLRSVEELNSASDFLESLPLATKLGTDHQTLVDGILKSLN
AKLAIKLEPVTHNRWEISSEGLSYADTTSPEVAFFNAVREVLEVGGVPGL
DQLEKKVSKQVMVRGKQQALRRKWVSIDKETKAFKLNDDVNVTDEVANAL
RKLRDQDGSPNGVSSVMLKDLKSRKLAALKPYKTFKIFPGERLVDARKNQ
ATELTKEMLESGDWKSVAFKPYNFDAEGKQTNGGYLHTLLKVREQFRLIF
LEMGFEEMPTNNYVESSFWNFDALFQPQQHPARDEHDTFFLSDPEFANVM
DRNYLERVRKVHEEGGFGSRGYRYEWSEQEARKNILRTHTTAVSSRMLYL
LAQQKEFKPKKYFSIDRVFRNETLDATHLAEFHQIEGLVADRNLSLGHLK
GIIHEFFKKMGMSKLRFKPTHNPYTTPSLEIHSYHEGLKKWVEVGNSGVF
RPEMIRPMGIPEDVTVIAWGLSLERPTMIRYGIRNIRDLFGHKVDLKAIQ
TNPICRLTF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002319Phenylalanyl-tRNA_Synthase
IPR040724PheRS_DBD1
IPR040725PheRS_DBD3
IPR045864aa-tRNA-synth_II/BPL/LPL
IPR004529Phe-tRNA-synth_IIc_asu
IPR006195aa-tRNA-synth_II