Gcaud2123.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2123.t1
Unique NameGcaud2123.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length375
Homology
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BLAST of Gcaud2123.t1 vs. uniprot
Match: A0A2V3IC45_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC45_9FLOR)

HSP 1 Score: 111 bits (278), Expect = 1.700e-23
Identity = 63/131 (48.09%), Postives = 85/131 (64.89%), Query Frame = 0 
Query:  226 ICISSNLTDRDENVFTVSERANSSPVSHIPSAKLQ-PRLFETENLSKLPERIIPELPPFSVPELSTFNAFTTHDLRNEFIGGILSLIIVSQLHKIFQSLIYFVPGINEEAYSSYIIFSRLCSFRHISRLFT 355
            +C+S  L +  E V  VS       +S +P A +Q P  F+  +L      +    PPFS   LS FN+FTT+DL N+F GGILSLI+V+QLH+IF+ LIYF PG++   YSSY++FSRL SFR++ RLFT
Sbjct:   13 LCLSPFLREY-EQVVPVSTLLLMGNLSELPIASIQHPVPFDPTSLQTF-LNVSSNTPPFSASSLSLFNSFTTNDLANDFTGGILSLIVVAQLHRIFKGLIYFFPGVHNRGYSSYVVFSRLASFRYLFRLFT 141
The following BLAST results are available for this feature:
BLAST of Gcaud2123.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IC45_9FLOR1.700e-2348.09Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1213_length_12574_cov_4.799648contigNODE_1213_length_12574_cov_4.799648:8757..10146 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2123.t1Gcaud2123.t1Gracilaria caudata M_176_S67 malemRNANODE_1213_length_12574_cov_4.799648 8757..10146 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2123.t1 ID=Gcaud2123.t1|Name=Gcaud2123.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=375bp
MRKFASFISKVTVLLQDRVKLDTGASVPRPYIKVVTYEDVNVILSELHEY
WPKWTNSPPSNIEGLTFDDCSGSGDCVAPRVCMSCPIPPCYCVKSPLFEN
YSFEPVPILHEPIEPPMGLLGLGLTGDRCFSHTDCRGTRSCLGKHTFVAE
VYNLTTCESSQFPCVCTPIHLIPCSTTSDCPDQDEVCASVLFTLNSVFSH
RPPEDSQGGDQEDDQGGDQTAVLDPICISSNLTDRDENVFTVSERANSSP
VSHIPSAKLQPRLFETENLSKLPERIIPELPPFSVPELSTFNAFTTHDLR
NEFIGGILSLIIVSQLHKIFQSLIYFVPGINEEAYSSYIIFSRLCSFRHI
SRLFTGTNRIPEVPRPLMIEVQNK*
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