Gcaud2120.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2120.t1
Unique NameGcaud2120.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length113
Homology
BLAST of Gcaud2120.t1 vs. uniprot
Match: Q7XY47_GRIJA (Thioredoxin n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY47_GRIJA)

HSP 1 Score: 119 bits (299), Expect = 2.570e-32
Identity = 57/113 (50.44%), Postives = 82/113 (72.57%), Query Frame = 0
Query:    1 MVKQIESKPEFESAVKEAPIVVVDFFAVWCGPCRMIAPVIEKIETELQESNPD---KVAFFKVDVDQLQELAEEMKISAMPTFLVFHNGVLDETIVGANAPKIQQHITELLAK 110
            MVK I+ + +F++A+  +P+VV DF+A WCGPCR IAP I+K++  L     D   KVAF+KV+VDQ Q LA +M +SAMPTF++++NG +  TIVGAN PK++  +T+ L K
Sbjct:    1 MVKHIDVEQDFDAAINASPVVVFDFYADWCGPCRFIAPEIQKLDEHLNADTADTKGKVAFYKVNVDQNQALAVKMDVSAMPTFIIYYNGSVVSTIVGANFPKLKHAVTDYLDK 113          
BLAST of Gcaud2120.t1 vs. uniprot
Match: C5DC97_LACTC (Thioredoxin n=2 Tax=Lachancea TaxID=300275 RepID=C5DC97_LACTC)

HSP 1 Score: 107 bits (267), Expect = 4.360e-28
Identity = 55/104 (52.88%), Postives = 73/104 (70.19%), Query Frame = 0
Query:    1 MVKQIESKPEFESAVKEAPIVVVDFFAVWCGPCRMIAPVIEKIETELQESNPDKVAFFKVDVDQLQELAEEMKISAMPTFLVFHNGVLDETIVGANAPKIQQHI 104
            MV QI S  EFE AVK   +VVVDFFA WCGPC+MIAP+IEK   +   +     AF+K+DVDQ+ E+A++ ++SAMPT L+F NG + + +VGAN   I+Q I
Sbjct:    1 MVAQIGSASEFEQAVKVDKLVVVDFFATWCGPCKMIAPMIEKFAEQYPSA-----AFYKLDVDQVPEVAQQNEVSAMPTILLFKNGQVIDKVVGANPAAIKQKI 99          
BLAST of Gcaud2120.t1 vs. uniprot
Match: A0A4P6XWI7_9ASCO (Thioredoxin n=2 Tax=Metschnikowia TaxID=27320 RepID=A0A4P6XWI7_9ASCO)

HSP 1 Score: 105 bits (261), Expect = 3.560e-27
Identity = 50/105 (47.62%), Postives = 72/105 (68.57%), Query Frame = 0
Query:    1 MVKQIESKPEFESAVKEAPIVVVDFFAVWCGPCRMIAPVIEKIETELQESNPDKVAFFKVDVDQLQELAEEMKISAMPTFLVFHNGVLDETIVGANAPKIQQHIT 105
            MV  I S  EF+ A+K   +VVVDFFA WCGPC+MIAP+++K  T+   +      F K+DVDQLQE+A+E ++S+MPTFL F +G +   ++GAN   ++Q +T
Sbjct:    1 MVATITSTSEFQEALKHDGLVVVDFFATWCGPCKMIAPMVDKFATQYANAK-----FIKIDVDQLQEIAQEYEVSSMPTFLFFKDGKVIHKVIGANPAALKQGLT 100          
BLAST of Gcaud2120.t1 vs. uniprot
Match: A0A120K0T5_9SACH (Thioredoxin n=1 Tax=Eremothecium sinecaudum TaxID=45286 RepID=A0A120K0T5_9SACH)

HSP 1 Score: 105 bits (261), Expect = 3.560e-27
Identity = 53/106 (50.00%), Postives = 73/106 (68.87%), Query Frame = 0
Query:    1 MVKQIESKPEFESAVKEAPIVVVDFFAVWCGPCRMIAPVIEKIETELQESNPDKVAFFKVDVDQLQELAEEMKISAMPTFLVFHNGVLDETIVGANAPKIQQHITE 106
            MV QI S+ E+  AV +  +VVVDFFA WCGPC+MIAP+IEK +T   +     V F+KVDVD L E+A++  I++MPTFL + +G L + + GAN  K++Q I E
Sbjct:    1 MVTQITSESEYSDAVSKDALVVVDFFATWCGPCKMIAPMIEKFDTNYAD-----VLFYKVDVDALPEVAQKESITSMPTFLFYKSGKLLDKVTGANPAKVKQLIEE 101          
BLAST of Gcaud2120.t1 vs. uniprot
Match: G0V745_NAUCC (Thioredoxin domain-containing protein n=1 Tax=Naumovozyma castellii (strain ATCC 76901 / BCRC 22586 / CBS 4309 / NBRC 1992 / NRRL Y-12630) TaxID=1064592 RepID=G0V745_NAUCC)

HSP 1 Score: 104 bits (260), Expect = 1.750e-26
Identity = 52/104 (50.00%), Postives = 74/104 (71.15%), Query Frame = 0
Query:    1 MVKQIESKPEFESAVKEAPIVVVDFFAVWCGPCRMIAPVIEKIETELQESNPDKVAFFKVDVDQLQELAEEMKISAMPTFLVFHNGVLDETIVGANAPKIQQHI 104
            MVKQI S  EF+SA+    +VVVDFFAVWCGPC++IAP+++K E + + +     AF+KVDVD+L ++A++ +IS+MPT L F +G     +VGAN   I+Q I
Sbjct:   45 MVKQITSSAEFDSAIAADKLVVVDFFAVWCGPCKLIAPMVDKFEQQYENA-----AFYKVDVDELSDVAQKNEISSMPTLLFFKSGKQVAKVVGANPAAIKQTI 143          
BLAST of Gcaud2120.t1 vs. uniprot
Match: Q6FND5_CANGA (Thioredoxin n=2 Tax=Candida glabrata TaxID=5478 RepID=Q6FND5_CANGA)

HSP 1 Score: 103 bits (256), Expect = 2.040e-26
Identity = 53/104 (50.96%), Postives = 72/104 (69.23%), Query Frame = 0
Query:    1 MVKQIESKPEFESAVKEAPIVVVDFFAVWCGPCRMIAPVIEKIETELQESNPDKVAFFKVDVDQLQELAEEMKISAMPTFLVFHNGVLDETIVGANAPKIQQHI 104
            MVKQI S  EF+SA+    +VVVDFFA WCGPC+MIAP+IEK   E   ++     F+K+DVD+L E+A++ ++SAMPT ++F NG     +VGAN   I+Q I
Sbjct:    1 MVKQITSVSEFDSAIAVDKLVVVDFFATWCGPCKMIAPMIEKFAAEYSTAD-----FYKLDVDELPEVAQKNEVSAMPTLVLFKNGKEVAKVVGANPAAIKQAI 99          
BLAST of Gcaud2120.t1 vs. uniprot
Match: A0A7D9D0D1_DEKBR (DEBR0S6_04676g1_1 n=2 Tax=Dekkera bruxellensis TaxID=5007 RepID=A0A7D9D0D1_DEKBR)

HSP 1 Score: 103 bits (258), Expect = 2.900e-26
Identity = 51/106 (48.11%), Postives = 71/106 (66.98%), Query Frame = 0
Query:    2 VKQIESKPEFESAVKEAPIVVVDFFAVWCGPCRMIAPVIEKIETELQESNPDKVAFFKVDVDQLQELAEEMKISAMPTFLVFHNGVLDETIVGANAPKIQQHITEL 107
            VKQI S+ EF+ A+  + +VVVDFFA WCGPC+M+AP+IE    E   +N     F+KVDVDQL  +A    +S+MPT L F NG L  T++GAN   ++Q++ +L
Sbjct:   39 VKQITSEAEFKEAISASNLVVVDFFATWCGPCKMLAPMIENFAKEYTSTN-----FYKVDVDQLPNVAASNSVSSMPTLLFFKNGQLLGTVIGANPGAVKQNLAKL 139          
BLAST of Gcaud2120.t1 vs. uniprot
Match: A0A4P6XU10_9ASCO (Thioredoxin n=4 Tax=Metschnikowia TaxID=27320 RepID=A0A4P6XU10_9ASCO)

HSP 1 Score: 102 bits (255), Expect = 2.900e-26
Identity = 49/102 (48.04%), Postives = 71/102 (69.61%), Query Frame = 0
Query:    1 MVKQIESKPEFESAVKEAPIVVVDFFAVWCGPCRMIAPVIEKIETELQESNPDKVAFFKVDVDQLQELAEEMKISAMPTFLVFHNGVLDETIVGANAPKIQQ 102
            MV  + S  EF+ A+K   +VVVDFFA WCGPC+MIAP+++K  T+   +      F KVDVD+LQE+A+E +IS+MPTFL+F  G + + ++GAN   ++Q
Sbjct:    1 MVSAVTSTSEFQEALKHDGLVVVDFFATWCGPCKMIAPMVDKFATQYTGAK-----FIKVDVDELQEVAQEYEISSMPTFLLFKEGKVIQKVIGANPAALKQ 97          
BLAST of Gcaud2120.t1 vs. uniprot
Match: A5E6L1_LODEL (Thioredoxin n=1 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5E6L1_LODEL)

HSP 1 Score: 102 bits (255), Expect = 2.990e-26
Identity = 52/105 (49.52%), Postives = 71/105 (67.62%), Query Frame = 0
Query:    1 MVKQIESKPEFESAVKEAP-IVVVDFFAVWCGPCRMIAPVIEKIETELQESNPDKVAFFKVDVDQLQELAEEMKISAMPTFLVFHNGVLDETIVGANAPKIQQHI 104
            MV Q+ S  EFE  +K    +VVVDFFA WCGPC+MIAP++EK  T+  E     V F KVDVD +QELA++ ++++MPT L F NG + E ++GAN   I++ I
Sbjct:    1 MVSQVSSAKEFEDTIKSFQGLVVVDFFATWCGPCKMIAPLLEKFSTQYTE-----VKFLKVDVDAVQELAQQYQVTSMPTLLFFKNGEVIEKVIGANPSAIKKAI 100          
BLAST of Gcaud2120.t1 vs. uniprot
Match: A0A194AK15_PINFU (Thioredoxin n=1 Tax=Pinctada fucata TaxID=50426 RepID=A0A194AK15_PINFU)

HSP 1 Score: 102 bits (254), Expect = 4.240e-26
Identity = 51/109 (46.79%), Postives = 74/109 (67.89%), Query Frame = 0
Query:    1 MVKQIESKPEFESAVKEAPIVVVDFFAVWCGPCRMIAPVIEKIETELQESNPDKVAFFKVDVDQLQELAEEMKISAMPTFLVFHNGVLDETIVGANAPKIQQHITELLA 109
            MV  +++K EF+  +KE P+ +VDF+A WCGPCRMIAP IE+   E        V F KV+VD+  E++EE +ISAMPTF +F  G + + +VGA+  KI++ + EL+A
Sbjct:    1 MVTLVKTKEEFDGKLKEKPLALVDFYADWCGPCRMIAPKIEEFAKEFTN-----VTFLKVNVDESSEISEEYEISAMPTFKLFREGKVVKEVVGASEAKIKEALEELVA 104          
The following BLAST results are available for this feature:
BLAST of Gcaud2120.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Q7XY47_GRIJA2.570e-3250.44Thioredoxin n=1 Tax=Griffithsia japonica TaxID=832... [more]
C5DC97_LACTC4.360e-2852.88Thioredoxin n=2 Tax=Lachancea TaxID=300275 RepID=C... [more]
A0A4P6XWI7_9ASCO3.560e-2747.62Thioredoxin n=2 Tax=Metschnikowia TaxID=27320 RepI... [more]
A0A120K0T5_9SACH3.560e-2750.00Thioredoxin n=1 Tax=Eremothecium sinecaudum TaxID=... [more]
G0V745_NAUCC1.750e-2650.00Thioredoxin domain-containing protein n=1 Tax=Naum... [more]
Q6FND5_CANGA2.040e-2650.96Thioredoxin n=2 Tax=Candida glabrata TaxID=5478 Re... [more]
A0A7D9D0D1_DEKBR2.900e-2648.11DEBR0S6_04676g1_1 n=2 Tax=Dekkera bruxellensis Tax... [more]
A0A4P6XU10_9ASCO2.900e-2648.04Thioredoxin n=4 Tax=Metschnikowia TaxID=27320 RepI... [more]
A5E6L1_LODEL2.990e-2649.52Thioredoxin n=1 Tax=Lodderomyces elongisporus (str... [more]
A0A194AK15_PINFU4.240e-2646.79Thioredoxin n=1 Tax=Pinctada fucata TaxID=50426 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 21..29
score: 57.53
coord: 29..38
score: 67.44
coord: 73..84
score: 33.38
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..111
e-value: 5.1E-32
score: 112.4
NoneNo IPR availablePANTHERPTHR46115THIOREDOXIN-LIKE PROTEIN 1coord: 1..111
NoneNo IPR availableCDDcd02947TRX_familycoord: 10..99
e-value: 2.59906E-32
score: 106.874
IPR005746ThioredoxinTIGRFAMTIGR01068TIGR01068coord: 9..105
e-value: 3.9E-29
score: 98.8
IPR005746ThioredoxinPIRSFPIRSF000077Thioredoxincoord: 1..109
e-value: 2.2E-30
score: 102.7
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 7..105
e-value: 1.0E-27
score: 96.1
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 1..109
score: 13.196768
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 22..40
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 2..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_789_length_17968_cov_4.013593contigNODE_789_length_17968_cov_4.013593:8710..9125 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2120.t1Gcaud2120.t1Gracilaria caudata M_176_S67 malemRNANODE_789_length_17968_cov_4.013593 8710..9125 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2120.t1 ID=Gcaud2120.t1|Name=Gcaud2120.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=113bp
MVKQIESKPEFESAVKEAPIVVVDFFAVWCGPCRMIAPVIEKIETELQES
NPDKVAFFKVDVDQLQELAEEMKISAMPTFLVFHNGVLDETIVGANAPKI
QQHITELLAKPQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005746Thioredoxin
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR036249Thioredoxin-like_sf