Gcaud2107.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2107.t1
Unique NameGcaud2107.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length204
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2107.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..123
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 154..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 196..203
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 173..195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..153
NoneNo IPR availableTMHMMTMhelixcoord: 173..195
NoneNo IPR availableTMHMMTMhelixcoord: 136..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_112_length_49450_cov_4.312142contigNODE_112_length_49450_cov_4.312142:36940..37551 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2107.t1Gcaud2107.t1Gracilaria caudata M_176_S67 malemRNANODE_112_length_49450_cov_4.312142 36940..37551 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2107.t1 ID=Gcaud2107.t1|Name=Gcaud2107.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=204bp
MKDQSNSVPPDAPNAAVPPQPGGYPSAVPPQAGYAPPQPGYAPPQPGYAP
PQPGYAPPQPGYAPPQPGYAPPQPGYAPPQPGYAPPQPGYAPPQAGYAPP
PASNTTYSMPVPSSQIPQQQKPTAQPVANQSYWGKFFIGFLLSFFIGPVF
ALLFAACCPQSFGITNAKARNKYVAGCITALVVGAIIAAILYFVVLRQIY
ASY*
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