Gcaud2096.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2096.t1
Unique NameGcaud2096.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length920
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2096.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 675..690
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 719..740
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 166..186
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..350
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 657..804
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 780..804
IPR001876Zinc finger, RanBP2-typePROSITEPS01358ZF_RANBP2_1coord: 516..535

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_781_length_18128_cov_4.694018contigNODE_781_length_18128_cov_4.694018:15271..18030 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2096.t1Gcaud2096.t1Gracilaria caudata M_176_S67 malemRNANODE_781_length_18128_cov_4.694018 15271..18030 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2096.t1 ID=Gcaud2096.t1|Name=Gcaud2096.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=920bp
LLPHAHNILCSLAAKGVHGFLQTEIEHPAGGVCTSITPELVPDVFAASRA
DFLVLLDDRNIQTRTVQLRLPPKPDFIDVPLANLCDIVLDTWTQRLRTVN
NIAHLRALASNPNVVTTAHLDSLLHSISNLSALRRSYAKLARLANITQEW
QSVRLPKPFSVSHQPQPPTQPLQTLSTPLLSNPPSVPSSVASTWNYSDHS
SSAPCRALPTTPNAALANTDQLTPQTKDLRTTTSSQLAGKVDAHSLNLIS
NQSTAMVHTQQDVLQSFETQQRPQQRSTTISNPTDSTKQTLDSASSATVL
NAAHTSEPSIRSEESSYRSADHSTSQGVSSPTDNIDVSSHDPDHPGAHVH
AMTATALRRGLASIARANVRNQNSGEIRASQPEFSFSWLKRSQDLSAKIL
RHQFLASHLHRTLLEACDSISKMQASSHPLAHHEHNRLPTEAHRQRLLRE
IHDLVPRIEELGKRLSKRPKDKRRCRNFRETNPWDAYITQAQYATITRGI
QGSNEHTKELSSAGWWRCWACRALNDPDASTCAVCRTHSCEFVPNLAPAY
VDQLSEGLREAIKSVRVGPLPWIFSPSVLPIPPSVVPSFTTGWFPKDRRD
NELLRNSFPSEDGRGSLPGRFQPFPNGSHELSERALRSRDPFDLSAAFSN
IQCDDGYQRRNNERTRRGAQTFGRGPEVKSSSTTRRGEISAFPKRNSPLR
MASSAPNGPSAGDHISRISKNGMHTNTSRDGLSVGKNSTGPLIPQDLGLD
GKTFGQFKQHTALAGSLPSVDPHGSNGMRGPRQPGSSGTRESYQTGDNFS
TITGFTKRNYPSKFKSSISQPVEELAVGSYEASNSMQMFPDEKHSSNPAK
GPVSDADYQSGGIASLEALAAASDAANGGTGSATKESLQTVSAAITAASD
ESQKPMVVPSVPNGTYNMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001876Znf_RanBP2