Gcaud2085.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2085.t1
Unique NameGcaud2085.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length97
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2085.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..96
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..29
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2442_length_5645_cov_4.400612contigNODE_2442_length_5645_cov_4.400612:563..1112 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2085.t1Gcaud2085.t1Gracilaria caudata M_176_S67 malemRNANODE_2442_length_5645_cov_4.400612 563..1112 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2085.t1 ID=Gcaud2085.t1|Name=Gcaud2085.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=97bp
XLLSFTRTVLSGSVVFFAAALLPMLPIAAQRFCHSWFDWALTKAMFRGAA
SRRCVEVLLIQTPTCVVHCFQRDIIIAQNNRLCYSKSFCSKDIDGV*
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