Gcaud2057.t1 (polypeptide) Gracilaria caudata M_176_S67 male
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Overview
Homology
BLAST of Gcaud2057.t1 vs. uniprot
Match: A0A2V3IN30_9FLOR (Putative pentatricopeptide repeat-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN30_9FLOR) HSP 1 Score: 941 bits (2431), Expect = 0.000e+0 Identity = 508/769 (66.06%), Postives = 594/769 (77.24%), Query Frame = 0
Query: 43 EWRTLTLIDGPSWVSAVPARAGVEMSRARARQLRMQGDLTAAMRVVRLAGLRFSRDERDVVECLLVLLGSPQFTAPRERLLAMVDVLRDARGDLGAAAYNVVLTACAREAARLTHNSAAKDYV-LHTASRMWTQLGRRGSHIHPRSTALMYRICGDCNNLQLARRIRDHTNDPAVPRARAASPKPQSSELATAAYILCLGKCHRAQEAEQLYFSPHLAKLRSSDRMLSALFRAYVASNAISKAESLIAMYGATFLNVQSCNAFVKQCAQLRLHDTAIAFVNRMARSSTTRFPSPNARTYNLLLRGLSAGTGVEDRDVAADRALLIVEQMKRQNIQPTTVTYNTLIRAFVFRDRTEEAVSLYRSMKNPNRITFSHMMQAAANTRDKRLADDLLDHLEQVNERPNYSLIKSYLEIVADKHGIQSAFDETKRLAERFGNVVVFGDVGSAEAIRMALISACGKVRQVEAAFDALRLHLSGDSSGALAPLYVSTVLMQVCFSCGEHGRALEVFESLKQAGLKPNFEVYESLIYGLASHVRKAASRG--SQLEHEDSGDGEEEEEGHIMHAVGAVDGTIVEGADAQE----LKQWMRLIVHLLEEMHADGVARVSREAAYVYNTVLAAAAAAGDFDLSLQIFNRMTTRRNRNVVYLARDEASTAETH----TLESELEFPTATVGTYNSMMFAAWKCGVPSFSFEAFDLMLADRAAEPNGATLSLLADIALQEGQLKTEWLQKLLHVLDKVPILPERVCRKRVRLRQKLLALRWS 800
W + +++ PS V+ VPA R R+RQLR+ G+ A RV R++GL++SR++ D+VE LLVLL S +F PR+RL AM+ L+ A+ D AA YNVVL ACAR+AARL S A+ V L TA +WTQL R + + PRS ALMYRICGDC+NLQLAR IR TNDP + A P SSE ATAAYILCLGKC RA EAEQLYFSPHL LR++ R+L ALF+AYVASN ISKAESLIAMYG FL VQSCNAFVK CAQLRLHDTAI FV RMA S +T +P PNARTYNLLLRGLSAGTGVEDRDVAADRALL+VEQMK Q I PTTVTYNTLIRAFVFR++ ++A+ LYR M PNRITFSH+M AAA TRD LA +LL HLEQ+NERPNYS +KSYL+++A G+Q+AF+ RLAERFG+VVVFGDVGSAEA+RMALISACGKVR V+AAF+AL +L+GD G LAPLYVSTVLMQVC +CGE GRALEVFESLKQAGL+PNFEVYESLIYGLAS+VR+AA R S E DGEEE V V+G + AD Q+ L Q + LIV L+ EMHA GVARVSR+AAYVYNTVLAAAAAAGD +L+LQ+FN+MT NRN+VY+AR + + E E+EFP ATVGTYNSMMFAAWKCGVPSFSFEAFD+ML+DR+AEPN ATLSLLAD+AL+E + EWLQKLL +LD++PIL + VC+KRVRLRQK+LALRWS
Sbjct: 35 RWHAVAVLEAPSSVAVVPA-THAPSPRLRSRQLRLSGNNREAYRVARVSGLQYSRNQHDLVEYLLVLLVSDRFDGPRQRLDAMISALKHAKCDCSAAVYNVVLAACARDAARLGAGSHARSQVVLRTAYHVWTQLTDRFAAVQPRSIALMYRICGDCHNLQLARHIRARTNDPVLANTVAQPVPPLSSEHATAAYILCLGKCDRAVEAEQLYFSPHLTHLRANHRVLGALFQAYVASNRISKAESLIAMYGTAFLTVQSCNAFVKHCAQLRLHDTAITFVQRMADSESTAYPPPNARTYNLLLRGLSAGTGVEDRDVAADRALLVVEQMKHQRIHPTTVTYNTLIRAFVFRNQIQQALQLYRRMSTPNRITFSHLMHAAAKTRDIHLAQNLLHHLEQLNERPNYSFMKSYLQLIAQVDGVQAAFEHATRLAERFGHVVVFGDVGSAEAVRMALISACGKVRDVQAAFEALSHNLAGDKGGLLAPLYVSTVLMQVCLACGEPGRALEVFESLKQAGLQPNFEVYESLIYGLASYVRRAAYREWHSAQEGAQRDDGEEELSTVPDDGVAEVEG-VAGDADTQQQAAQLSQCISLIVQLIGEMHASGVARVSRQAAYVYNTVLAAAAAAGDLNLALQVFNKMTPTNNRNIVYVARSNSGKGDEDGCDGLFEREVEFPAATVGTYNSMMFAAWKCGVPSFSFEAFDMMLSDRSAEPNAATLSLLADVALEEANVDVEWLQKLLQLLDRMPILSDVVCKKRVRLRQKVLALRWS 801
BLAST of Gcaud2057.t1 vs. uniprot
Match: R7QQS3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQS3_CHOCR) HSP 1 Score: 741 bits (1912), Expect = 1.260e-255 Identity = 428/814 (52.58%), Postives = 541/814 (66.46%), Query Frame = 0
Query: 47 LTLIDGPSWVSAVPARAGVEMSRARARQLRMQGDLTAAMRVVRLAGLRFSRDERDVVECLLVLLGSPQFTAPRERLLAMVDVLRDARGDLGAAAYNVVLTACAREAARLTHNSAAK-DYVLHTASRMWTQLGRRGSHIHPRSTALMYRICGDCNNLQLARRIRDHTNDPAVPRARAASPKPQSSELATAAYILCLGKCHRAQEAEQLYFSPHLAKLRSSDRMLSALFRAYVASNAISKAESLIAMYGATFLNVQSCNAFVKQCAQLRLHDTAIAFVNRMARSSTTRFPSPNARTYNLLLRGLSAGTGVEDRDVAADRALLIVEQMKRQNIQPTTVTYNTLIRAFVFRDRTEEAVSLYRSMKNPNRITFSHMMQAAANTRDKRLADDLLDHLEQVNERPNYSLIKSYLEIVADKHGIQSAFDETKRLAERFGNVVVFGDVGSAEAIRMALISACGKVRQVEAAFDALRLHLSG--DSSGALAPLYVSTVLMQVCFSCGEHGRALEVFESLKQAGLKPNFEVYESLIYGLASHVR-KAASRGSQLEHEDSGD---GEEEEEGHIM------------HAVGAVDGTIVEGADAQ------ELKQWMRLIVHLLEEMHADGVARVSREAAYVYNTVLAAAAAAGDFDLSLQIFNRMTTRRNRNVVYLARDE----------------------------------ASTAETHTLESELEFPTATVGTYNSMMFAAWKCGVPSFSFEAFDLMLADRAAEPNGATLSLLADIALQEGQ-LKTEWLQKLLHVLDKVPILPERVCRKRVRLRQKLLALRWS 800
+++ +G SWVS VP + G++ R+R+R LR GD AA +V+ AG SR E D++E LLVLL + +F PRERL AMV+ L + AA+N++LTACAREA R++ NS+ K D +L A +W ++ + + PR+TALMYRICG+C +++LA+ IR+ NDPA+ A S + ATAA+ILCLGKC R+ EAEQLYFS + + RSSD +LSALFR+YVASN ISKAESLI+MYG+ FL V SCNAFVKQCA LRLHD+A+ FV RM+R++ T FP PNA+TYNLLLRGLSAGTG EDRDVAADRAL++V+QMK Q I PTTVTYNTLIR+ VFR + +EA+ LYR M +PNRITFSH+MQ AAN D LA+D+ L Q ERPNY KSYLE +A G +AF E R++E FG+ +VFGDVGS EAIRMALISACGKV + AF+AL L L+ ++ G LAPLYV+TVLMQVC C GRALEVF+S++ AGLKPNFEVYESLI+GL S+VR + + + E+ D G+ H + H +G + E + +R+ V LL EMHA+G R R+AAYVYNT++AAAAA DF+L+LQIFN+M+ R N+ VVY ++D A+ A T +SE EFP ATVGTYNSM+ AAWKCG P +SFE F LM DR EPN ATLSLLADIAL E + + +KLL LD + IL V +KR+RLR+KLLALRWS
Sbjct: 39 MSVKEGKSWVSMVPQK-GLQHPRSRSRDLRFAGDARAAHKVLLRAGAHRSRHEADLIELLLVLLNTDEFKGPRERLEAMVNALWKSPSSKPKAAFNILLTACAREAGRVSDNSSVKRDVILKVAKSVWAEMLQTVKRVDPRNTALMYRICGECKDIELAKSIREQINDPAIFPAGGDGASLSSVD-ATAAFILCLGKCGRSGEAEQLYFSGYSSAHRSSDMVLSALFRSYVASNRISKAESLISMYGSGFLTVLSCNAFVKQCAALRLHDSALEFVGRMSRTNETGFPGPNAQTYNLLLRGLSAGTGTEDRDVAADRALVVVDQMKAQGIAPTTVTYNTLIRSLVFRHQMKEALELYRGMDSPNRITFSHLMQGAANIPDLELAEDIFASLVQAGERPNYGFCKSYLETIAKLKGTDAAFTEATRVSEEFGDALVFGDVGSHEAIRMALISACGKVGDLSKAFEALDLPLASHRNTVGNLAPLYVATVLMQVCLQCHAPGRALEVFDSVRGAGLKPNFEVYESLIHGLCSYVRFRGVTEAFHADIENENDKSLGDWTPNSHTLAPAENSSSDRGRHEAAQSFEQSEDGRQDRVPSGNVEANEAVRIAVELLREMHANGEGRAIRQAAYVYNTMIAAAAAINDFELALQIFNKMSNRNNQGVVYFSKDILGGVDEAQQDVGMSSEPPGGNRRPDEDGGGRARLAALASTGMFDSEYEFPMATVGTYNSMIDAAWKCGEPWYSFEVFQLMQMDRITEPNVATLSLLADIALSESHAVDADAQRKLLKELDAMAILSGDVSQKRIRLRKKLLALRWS 850
BLAST of Gcaud2057.t1 vs. uniprot
Match: A0A2V3IN37_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN37_9FLOR) HSP 1 Score: 232 bits (592), Expect = 2.660e-68 Identity = 118/170 (69.41%), Postives = 140/170 (82.35%), Query Frame = 0
Query: 635 MHADGVARVSREAAYVYNTVLAAAAAAGDFDLSLQIFNRMTTRRNRNVVYLARDEASTAETH----TLESELEFPTATVGTYNSMMFAAWKCGVPSFSFEAFDLMLADRAAEPNGATLSLLADIALQEGQLKTEWLQKLLHVLDKVPILPERVCRKRVRLRQKLLALRWS 800
MHA GVARVSR+AAYVYNTVLAAAA A D +L+LQ+FN+MT NRN+VY+AR + + E E+EFP ATVGTYNSMMFAAWKCGVPSFSFEAFD+ML+DR+AEPN ATLSLLAD+AL+E + EWLQKLL +LD++PIL + VC+KRVRLRQK+LALRWS
Sbjct: 1 MHASGVARVSRQAAYVYNTVLAAAATAVDLNLALQVFNKMTPTNNRNIVYVARSNSGKGDEDGFDGLFEREVEFPAATVGTYNSMMFAAWKCGVPSFSFEAFDMMLSDRSAEPNAATLSLLADVALEEANVDVEWLQKLLQLLDRMPILSDVVCKKRVRLRQKVLALRWS 170 The following BLAST results are available for this feature:
BLAST of Gcaud2057.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gcaud2057.t1 ID=Gcaud2057.t1|Name=Gcaud2057.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=801bpback to top |