Gcaud2040.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2040.t1
Unique NameGcaud2040.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1154
Homology
BLAST of Gcaud2040.t1 vs. uniprot
Match: A0A2V3ILD4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILD4_9FLOR)

HSP 1 Score: 350 bits (898), Expect = 1.090e-98
Identity = 351/1201 (29.23%), Postives = 555/1201 (46.21%), Query Frame = 0
Query:   17 PTDLPELVQTVPSPNCSVNPVVQVFIRTPAPA--AHL--AESASALCVPNNAVTTPNVAPLRLSSSPVLGTANKQTSAPNLQVRHGTVLFGNSHATSHV-----HGVMNI--SSNTASAHNIETSVMSQQTGRAGNSAHPPFRVYNRSPMVSTVLMK----------------QMKPVRTRRGAS--ASQMDSVALTG-------------GLNRSRDANIELQGQKRKNTS-------TDRPGAGSTAQLSPPSGMKSTSIASKRDPPRSPSSPAKPARVPARLSPIDEIYSKEKRRVMGDMVERRIAHHREKSSEKSLARSLTPISRLIEDAAIHKLSRKSRE---TVVASGSQSGNDSIKEPMAKGLSKQMDASSTPVEDTEARVPSQRDRTGSEIIGMDTSGPSKDNIGALSTDRALARALRKDKPNEGSRSE-----GNA--------KYGSNPF-----------RNSSSTKIGLSDETHLSVGRAGNIRVEAPMVPSEEADKVVRPPRFADDVQRLGSAEKTLVNRSSAPALTHSVEKGLQRAQEERMGLREVEDQYLTLTRSIFALIIQA-GQEGRNREGFSGTELKAHMKKRVLAAFVTHTGERPSVLNQKALKLLRQFKLCTTDVAT---LSRMKDAKVRKASYPVRRSKKGDVRREDIRGLKPMLLSWGGFRGDQKANIDQFHVDALHLKCIAEALQDGTHVSLSNDEAVLRFKELVLVHSGMELICCMIKKLKT-LYEAGDRECVRPWFRSTECILTWYNYMRSRMEDLLTIADEPFSSELRKYCKEFAKGLIDRPDDPNLRPELGEGVQIGFKLRELKKLIISLGEDENGNKLPTEDEYCDRTTSHLTPVIKLFARLLRSMALSAPSRSTGEGKGEGTGRSSREGSPESKV----IRRDSIEARKRDXXXXXQIESRAK------RGEPKGSSNKGIESKRALKNSGANQED-YRARAXXXXXXXXDSIRKRGVVDERRALHERGRG-NGGTVTELNSFPSIPRRPANVDSGGSSTRAGAARSSGADASGGRGIDRSGPAATVQRLLVGAASPAVEKGRKRKRGESILQNHNNETLDKNGMRADRRKKSRIRFRRTPDVDEKQPPVDKESLRTLFSDGESWMLSGNAVQKAAIEERNARLSRETVDIWFSFVRTFVWKHKCMKDGRPFVTPRFLPNPSTPSAIRDLSR 1124
            P  +PELVQT+PSPNC VNP+VQVF++ P+ +  AHL  AE + +   PNNAV TP+V PLR  ++     ++ QT    +    G     + + T+ +     H + N   SS   +++++     +Q +    +S++  FR YN SPM++ VL+K                ++ PV+     S  +S +++ + TG               +  R  N+     +++N S       + +P +G+     P SG +++  AS +             R   R    D + S+E+++ M D+V+RR A  R   S+ +  R LTP+S+ +E +    L+   +E      AS S     S   P++       D SS P+       P   D T ++ +  +   PS  +    S       AL K      S+ E     G+A          G  P            R S++  +  + + H S G   +++       S +  K    P  +  V  + +      +  S           LQR       +R  E+QY  L  SIF L  Q  G         +  EL +  K+R + A V+H G   + L++K L       L +  V     L    D +  +A+   RRS + +V++ DIR  K M  SW    G+    + QF  DALHLKC+ EAL++G  V LSN++ +  F+E +    G+E+I   I    T  ++      ++ W R+TE IL+W+ Y+ +RME LL + +EP +SEL  +C EF + L+  P   N   E G+G++I   LR LKK++ +L  +E       + ++ ++ T+ L+  ++ F RL  +MA  A   S    + E +   +R   P  +      R DS    +       ++ESR K      R    G +    E   +L+  G NQ D  R  A        +++ KRG   +  A  ER RG N        SFPSIPR+P+NVD+ G + R  +  S   D +  R   R+GPAATV R+L  A S  +   +KRKRG+ ILQN N+E    NGMR +R K++++RF    +  +   P DKE+++TLFSDG   + + NA+Q+AA+ ER  +LSR +V   F F+RTFV   K    G+P +    + +P  PSAIR+L+R
Sbjct:   31 PQSIPELVQTIPSPNCCVNPIVQVFVQAPSNSSDAHLRLAERSDSSRTPNNAVVTPSVVPLRTPTT----RSSSQTGVLQVTGPRGNDALASFNDTAGISKGGTHLISNKFHSSQAEASNDVALGPQTQHSLGRKSSSNDSFRTYNGSPMIAAVLVKGSASEHIQNVLEVSGSRLPPVQNNLVPSMPSSALNAPSTTGIALQTVPSFTRDVEASSGRTQNLRESSARKENQSLSIETGISKKPVSGAA----PKSGNRASPSASVK---------GNQTRSAGRSGLADNVVSREQKKAMQDIVDRRNAQRRAARSDNAPLRPLTPLSKFLEKSTGKSLTICEKEGTPKAQASASHVARVSNSVPVSSSNDIIPDNSSRPISRQHLTPPPDNDVTTAKGVSQE-GVPSSQHQQVPSLKAREEMALLKKNSISVSQKETIRHVGSAAKNISRTPSKGQEPAEPTRDGFDLNTRESATGALQSAPQEHRSAGEHHSLKGGVKPDSSSKPTKSTERPGQSSAVVGIQALNAPFPSSQSL-----GTRMPLQRDSILASNVRVAENQYFILIDSIFTLSSQIMGLRWHKSSRKTENELVSTWKRRTMEAIVSHYGNTRTALSKKRLHSSEN-NLSSNRVQKYPLLPAPSDFRKSRAANFSRRSTRFEVQQSDIRSFKDMFQSWEECMGE--GPVQQFQADALHLKCVTEALREGKRVFLSNEDVLPMFREFIYAKIGIEVITEKISMTSTNRHKVDSFPSIQSWLRTTESILSWFAYLGNRMEVLLKVKEEPLASELAAFCAEFTRRLLSSPTQVNT--EKGDGLKIAGSLRSLKKVVATLPSNEEIASSAQKSQHANKLTAFLSQYVQSFRRLSVTMARHAMPPSPDASRSETSRSETRSEDPAQRKGALSAREDSSSIAQIAPEGHSRVESRRKQDVREERAVLPGVAKVVPEPGNSLQYKGTNQGDRLRRGAVNLQRFSSEAMNKRG--SDHSAHTERARGRNAQRDAPATSFPSIPRKPSNVDNTGRA-RVQSRPSQNNDTTSKR--VRTGPAATVHRMLADATSDTLVGSKKRKRGDGILQNFNDEAFGDNGMRLNRPKRTKVRFGGESEGKKADLP-DKETIKTLFSDGSDLLGARNALQEAAVSERARKLSRRSVSRCFGFLRTFVSDLKSELIGQPHIPSDVISDPYPPSAIRNLAR 1197          
The following BLAST results are available for this feature:
BLAST of Gcaud2040.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILD4_9FLOR1.090e-9829.23Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1115..1153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 825..875
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 906..922
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..326
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 401..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 944..958
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 361..376
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 813..1025
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1137..1153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 876..905

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1239_length_12250_cov_4.291307contigNODE_1239_length_12250_cov_4.291307:7101..10800 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2040.t1Gcaud2040.t1Gracilaria caudata M_176_S67 malemRNANODE_1239_length_12250_cov_4.291307 7101..10800 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2040.t1 ID=Gcaud2040.t1|Name=Gcaud2040.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1154bp
XLVPLESSVRFGLDQDPTDLPELVQTVPSPNCSVNPVVQVFIRTPAPAAH
LAESASALCVPNNAVTTPNVAPLRLSSSPVLGTANKQTSAPNLQVRHGTV
LFGNSHATSHVHGVMNISSNTASAHNIETSVMSQQTGRAGNSAHPPFRVY
NRSPMVSTVLMKQMKPVRTRRGASASQMDSVALTGGLNRSRDANIELQGQ
KRKNTSTDRPGAGSTAQLSPPSGMKSTSIASKRDPPRSPSSPAKPARVPA
RLSPIDEIYSKEKRRVMGDMVERRIAHHREKSSEKSLARSLTPISRLIED
AAIHKLSRKSRETVVASGSQSGNDSIKEPMAKGLSKQMDASSTPVEDTEA
RVPSQRDRTGSEIIGMDTSGPSKDNIGALSTDRALARALRKDKPNEGSRS
EGNAKYGSNPFRNSSSTKIGLSDETHLSVGRAGNIRVEAPMVPSEEADKV
VRPPRFADDVQRLGSAEKTLVNRSSAPALTHSVEKGLQRAQEERMGLREV
EDQYLTLTRSIFALIIQAGQEGRNREGFSGTELKAHMKKRVLAAFVTHTG
ERPSVLNQKALKLLRQFKLCTTDVATLSRMKDAKVRKASYPVRRSKKGDV
RREDIRGLKPMLLSWGGFRGDQKANIDQFHVDALHLKCIAEALQDGTHVS
LSNDEAVLRFKELVLVHSGMELICCMIKKLKTLYEAGDRECVRPWFRSTE
CILTWYNYMRSRMEDLLTIADEPFSSELRKYCKEFAKGLIDRPDDPNLRP
ELGEGVQIGFKLRELKKLIISLGEDENGNKLPTEDEYCDRTTSHLTPVIK
LFARLLRSMALSAPSRSTGEGKGEGTGRSSREGSPESKVIRRDSIEARKR
DSTAARQIESRAKRGEPKGSSNKGIESKRALKNSGANQEDYRARAVSNTR
SSADSIRKRGVVDERRALHERGRGNGGTVTELNSFPSIPRRPANVDSGGS
STRAGAARSSGADASGGRGIDRSGPAATVQRLLVGAASPAVEKGRKRKRG
ESILQNHNNETLDKNGMRADRRKKSRIRFRRTPDVDEKQPPVDKESLRTL
FSDGESWMLSGNAVQKAAIEERNARLSRETVDIWFSFVRTFVWKHKCMKD
GRPFVTPRFLPNPSTPSAIRDLSRRVAELPASPRLSSHAARRDDVSTRKK
NTE*
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