Gcaud2014.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2014.t1
Unique NameGcaud2014.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length1117
Homology
BLAST of Gcaud2014.t1 vs. uniprot
Match: A0A2V3IJ35_9FLOR (Secretory immunoglobulin A-binding protein EsiB n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJ35_9FLOR)

HSP 1 Score: 471 bits (1213), Expect = 3.060e-144
Identity = 267/490 (54.49%), Postives = 346/490 (70.61%), Query Frame = 0
Query:  623 RVRGNKKIAEREMYFLERI-QRRLSYITLRMAHNYLKGHGEPPKMEKAYQMAKEVADERKSAYALRFVAYCNKHGKGTPRDEGNALTLIKQASEMGSQKAKIMLAIWLMKGINGVTXXXXXXXXXXXXXXXXXXXXXXXLGDLYHDGCFRLGEKKYCIRKIDYDRAWTLYKSAGDRGDTMYRKAHCFFHGHGVSLDREVAQQLLKRSAEKGYPHAQIQLAKLHEKGSPGIEKDLVRSFRLLQKAKLQLGSGARGVALHNISIFLQNHGQSLQLEMNDPTVYSTEYLRQLLEDAAAVDNMKALNDLAVVLEHRAQLDVCPEDQDMDSPTKAFEMFRRAAEVLPRAQANVGICYEMGIGTCQSTGLARASYEESVNKKDTIGMNNLALFLIDDKEFDRAAKLLKDACRHDESTPLLNMGWLLERGYGVAQDLKQAFHLYHKAALKNXXXXXXXXXXXXXXXXXXXXXXXLAEKNFRMAAEFGCEEAVRRLEM 1111
            RV+G+ K A +E + L+++ +RR  YI+LR+AHNYLKGHGEP + EKA+ MAKE+A+E KSAYALR                               +KA+I LA+WLMK     T                       LGDL++DGCFR GEK+YC R+IDY RA  LYKSAGDR + MYRK+ CF HGHGVS D +++ QLLKRS+EKGYPHAQIQLAK++E+G  G+E+DL R+  LLQKA L LG  +RGVALH++ +FLQ+HG SLQL ++DPT++S E +R L EDA   +N+K+ NDLAV+LE R Q +   E++D DS T AF++F++ AE +PRAQAN+GICYEMGIGTC+    AR+ YE++  K D +GMNNLAL LID+KE+DRAA+LL++A + ++S P+LNMGWL ERG+G+AQD K+AF          XXXXXXXXXXXXXXXXXXXXXXXLAE++FRM+ E GC EA +RL++
Sbjct:  619 RVKGSAKQAGKETHVLKKLHKRRPPYISLRLAHNYLKGHGEPTRAEKAFTMAKEIAEEGKSAYALRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKARITLAVWLMKA-GDETKNPEILGLLGDAAKKGSTTATIMLGDLHYDGCFRFGEKRYCEREIDYCRALELYKSAGDRPEVMYRKSRCFRHGHGVSKDSDISFQLLKRSSEKGYPHAQIQLAKIYEQGGAGVERDLYRALDLLQKAVLHLGGASRGVALHSLGVFLQHHGPSLQLRISDPTIFSKESIRALFEDAEKANNLKSANDLAVLLESRRQAEGDLEEEDTDSTTHAFQLFQKVAEFIPRAQANLGICYEMGIGTCRDMQRARSCYEKAAMKHDMVGMNNLALCLIDEKEYDRAAELLREAAKSEDSIPILNMGWLYERGFGIAQDSKRAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAERHFRMSEELGCAEATQRLDL 1107          
BLAST of Gcaud2014.t1 vs. uniprot
Match: R7Q728_CHOCR (Sel1-repeat containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q728_CHOCR)

HSP 1 Score: 166 bits (420), Expect = 4.890e-38
Identity = 118/410 (28.78%), Postives = 193/410 (47.07%), Query Frame = 0
Query:  648 ITLRMAHNYLKGHGEPPKMEKAYQMAKEVADERKSAYALRFVAYCNKHGKGTPRDEGNALTLIKQASEMGSQKAKIMLAIWLMKGINGVTXXXXXXXXXXXXXXXXXXXXXXXLGDLYHDGCFRLGEKKYCI--RKIDYDRAWTLYKSAGDRGDTMYRKAHCFFHGHGVSLDREVAQQLLKRSAEKGYPHAQIQLAKLHEKGSPGIEKDLVRSFRLLQKAKLQLGSGARGVALHNISIFLQNHGQSLQLEMNDPTVYSTEYLRQLLEDAAAVDNMKALNDLAVVLEHRAQLDVCPEDQDMDSPTKAFEMFRRAAEV-LPRAQANVGICYEMGIGTCQSTGLARASYEESVNKKDTIGMNNLALFLIDDKEFDRAAKLLKDACRHDESTPLLNMGWLLERGYGVAQDLKQA 1054
            I  R+A+ Y  G G P    +A  + +E    R+S      +      G+G P++      L+ +A +     AK    +  ++G+ G                         LGD ++ G F   + K  +   K D ++A + YK        +YR + C+  G GV++ ++ A   L+ +A+ G  H+Q  L    E G  G+ +D+  S    + A  +L    +G  ++N  +FL+ HGQ L+   + P     E L+QL + A+     +A NDLA++LE R   D   E+ +  + ++AF MF  A+E  + RA+ NVGICYEMGIGT      A+  YE +  + D +  NNLAL L + +E+ RA  LL  A    +S  ++N+G   E+G  +A   + A
Sbjct:  637 IAKRLAYVYYYGRGIPVYPARAISLLEEALKTRESDSVKELLGLFLVEGRGIPKNLLKGSVLLSEACKSNRASAKATQGLCQVRGLLG-GDPQKGVSLLEEAAEDGSTRACVLLGDYFYHGRFEQEKGKNTLLETKPDLEKAISYYKKGSTCPAALYRLSMCYGKGLGVTMSQDQASGFLRTAAKMGCAHSQSALCPYLEDGVHGLTQDMKMSLAYHENAVARLSGQRKGRVMYNFGLFLEKHGQELKY-FSSPAERD-EKLKQLFQGASEEGTGQATNDLAILLERRVNAD--NEEDETSATSEAFGMFLEASETGIIRAETNVGICYEMGIGTYGDMTKAKHYYERAALRGDAMAENNLALLLEEAQEYGRAVALLTKAASAGDSNAMVNLGRFHEKGQEMAVSSESA 1041          
The following BLAST results are available for this feature:
BLAST of Gcaud2014.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IJ35_9FLOR3.060e-14454.49Secretory immunoglobulin A-binding protein EsiB n=... [more]
R7Q728_CHOCR4.890e-3828.78Sel1-repeat containing protein n=1 Tax=Chondrus cr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 595..615
NoneNo IPR availablePANTHERPTHR11102:SF152ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT-RELATEDcoord: 150..351
coord: 1018..1105
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 271..435
coord: 333..477
coord: 940..1036
coord: 651..768
coord: 799..866
coord: 420..553
coord: 69..174
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 150..351
NoneNo IPR availablePANTHERPTHR11102:SF152ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT-RELATEDcoord: 271..435
coord: 940..1036
coord: 651..768
coord: 69..174
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 1018..1105
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 485..616
NoneNo IPR availablePANTHERPTHR11102:SF152ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT-RELATEDcoord: 333..477
coord: 799..866
coord: 420..553
NoneNo IPR availablePANTHERPTHR11102:SF152ERAD-ASSOCIATED E3 UBIQUITIN-PROTEIN LIGASE COMPONENT-RELATEDcoord: 485..616
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 79..216
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 946..1106
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 306..474
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 778..868
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 231..303
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 452..677
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 644..798
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 359..394
e-value: 0.046
score: 22.9
coord: 209..244
e-value: 3.5
score: 16.6
coord: 323..358
e-value: 0.012
score: 24.9
coord: 798..833
e-value: 0.028
score: 23.6
coord: 503..538
e-value: 6.8E-6
score: 35.6
coord: 395..430
e-value: 0.0041
score: 26.3
coord: 575..610
e-value: 0.036
score: 23.2
coord: 101..136
e-value: 2.2E-7
score: 40.6
coord: 683..718
e-value: 0.034
score: 23.3
coord: 173..208
e-value: 2.0E-5
score: 34.0
coord: 467..502
e-value: 0.15
score: 21.2
coord: 245..280
e-value: 0.032
score: 23.4
coord: 719..754
e-value: 22.0
score: 10.8
coord: 963..998
e-value: 1.1
score: 18.3
coord: 137..172
e-value: 0.09
score: 21.9
coord: 999..1030
e-value: 140.0
score: 3.6
coord: 834..870
e-value: 0.098
score: 21.8
coord: 539..574
e-value: 6.3E-7
score: 39.0
coord: 64..100
e-value: 49.0
score: 7.7
coord: 282..322
e-value: 17.0
score: 11.6
coord: 1067..1102
e-value: 0.8
score: 18.7
coord: 431..466
e-value: 1.0E-6
score: 38.3
coord: 1031..1066
e-value: 2.1E-5
score: 34.0
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 395..426
e-value: 0.012
score: 16.3
coord: 103..136
e-value: 0.0031
score: 18.2
coord: 1036..1066
e-value: 0.0018
score: 18.9
coord: 801..833
e-value: 0.43
score: 11.3
coord: 361..393
e-value: 35.0
score: 5.3
coord: 683..718
e-value: 0.11
score: 13.2
coord: 1070..1099
e-value: 6.6
score: 7.6
coord: 540..573
e-value: 2.0E-4
score: 22.0
coord: 922..960
e-value: 3.9
score: 8.3
coord: 323..353
e-value: 0.83
score: 10.4
coord: 580..604
e-value: 1.8
score: 9.4
coord: 834..865
e-value: 0.005
score: 17.5
coord: 213..241
e-value: 35.0
score: 5.3
coord: 723..753
e-value: 130.0
score: 3.5
coord: 651..671
e-value: 270.0
score: 2.5
coord: 431..466
e-value: 6.4E-4
score: 20.3
coord: 283..321
e-value: 4.3
score: 8.2
coord: 503..538
e-value: 0.026
score: 15.2
coord: 245..278
e-value: 0.21
score: 12.3
coord: 173..207
e-value: 0.44
score: 11.3
coord: 143..171
e-value: 0.98
score: 10.2
coord: 963..978
e-value: 250.0
score: 2.6
coord: 468..502
e-value: 10.0
score: 7.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 902..1116
e-value: 1.5E-34
score: 121.3
coord: 305..480
e-value: 4.8E-41
score: 142.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 37..304
e-value: 6.1E-56
score: 191.8
coord: 481..883
e-value: 4.2E-75
score: 255.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_801_length_17760_cov_4.605977contigNODE_801_length_17760_cov_4.605977:7977..11782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2014.t1Gcaud2014.t1Gracilaria caudata M_176_S67 malemRNANODE_801_length_17760_cov_4.605977 7977..11782 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2014.t1 ID=Gcaud2014.t1|Name=Gcaud2014.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=1117bp
MPLWQLPPKGKKTTHFSSPRLLVNGNCVIYLTDRADVREAHETVKMPMRR
MRSKHQDAIASVVAKALHRYASLATQGLPGNAPNLGAAIKAYNRAIAADH
VPSMYTLAKMYEEGVGTEKKPELAVQLYMRAVSHGHIPSKTSLAQCYRLG
TGVHQDANKCITLLREAVDQGCSSSLVALGDCYRDGFGVEVNHEKAVLSY
RKAIERGCSLGHVRLGECFREGKGVTIEETAAFQHFSAAANDAEPSAYME
VAKCYYRGLGTQKDMRSFFRYAKKAADEANDRAAMYIVGSMHAEGNVVQK
DYHTMKPEKAVKLLYELAQKDDADACLLLSECYFDGLGGHKDTERGLYYS
DRAVLAGRYIASYILGTRYANGKGVQKSDINALVQYRRAAEGGISEAHVE
VAKFYFKGRGVPKDHGSAVKHLQAALQSSNPDAAVMLADCYRLGIGVPAS
AETAYSLYAKAASMGDTDGMFELAQCSIFGDGCVKNFARARNLLQELSDR
GHAEATRLLAWFYYTGESIPINFRRAADLYRKASDLGDIEARCSLGLCLR
HGRGVTKDLRQAFLMYERAAEDGYVPAGANVALCYEKGVGVEVDLEKALQ
QYEKLIANNASYLTRNFLLCCERVRGNKKIAEREMYFLERIQRRLSYITL
RMAHNYLKGHGEPPKMEKAYQMAKEVADERKSAYALRFVAYCNKHGKGTP
RDEGNALTLIKQASEMGSQKAKIMLAIWLMKGINGVTDEDQAMSLLEEAS
KGGCMRATVMLGDLYHDGCFRLGEKKYCIRKIDYDRAWTLYKSAGDRGDT
MYRKAHCFFHGHGVSLDREVAQQLLKRSAEKGYPHAQIQLAKLHEKGSPG
IEKDLVRSFRLLQKAKLQLGSGARGVALHNISIFLQNHGQSLQLEMNDPT
VYSTEYLRQLLEDAAAVDNMKALNDLAVVLEHRAQLDVCPEDQDMDSPTK
AFEMFRRAAEVLPRAQANVGICYEMGIGTCQSTGLARASYEESVNKKDTI
GMNNLALFLIDDKEFDRAAKLLKDACRHDESTPLLNMGWLLERGYGVAQD
LKQAFHLYHKAALKNDPTGLLNLGTCYQREIGTGYDAKLAEKNFRMAAEF
GCEEAVRRLEMDQQNR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf