Gcaud2003.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud2003.t1
Unique NameGcaud2003.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length248
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud2003.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 178..195
score: 27.78
coord: 158..174
score: 32.94
coord: 101..117
score: 32.94
coord: 197..222
score: 27.69
coord: 130..151
score: 27.27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..247
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 132..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_5_length_105932_cov_4.447794contigNODE_5_length_105932_cov_4.447794:73884..74627 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud2003.t1Gcaud2003.t1Gracilaria caudata M_176_S67 malemRNANODE_5_length_105932_cov_4.447794 73884..74627 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud2003.t1 ID=Gcaud2003.t1|Name=Gcaud2003.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=248bp
MGLFRKKPQPVWFVLKPASSHSVDRQPMREGPYTRATIVRLYAESQLPAD
VLLWTNERIFPNADRPNSSRRVRLMEWRRMDQLPDPVVRQLEADALVLKQ
PPLPQPPQEQQQPTASPQHSADSASSSHSDIAPSSPPPPPPNAYIPAHQT
PEATPNYGPPSATPQTYVQQQQPAVYPQQQPPSDAPQPNPYPQQSVPYTN
PQRGEPYASPPAGYPQQPAVYPHQPNPYPPQGYPSYNPPGAPPPPLH*
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