Gcaud200.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud200.t1
Unique NameGcaud200.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length148
Homology
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BLAST of Gcaud200.t1 vs. uniprot
Match: A0A2V3IMG5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMG5_9FLOR)

HSP 1 Score: 158 bits (400), Expect = 1.510e-46
Identity = 82/146 (56.16%), Postives = 105/146 (71.92%), Query Frame = 0 
Query:    2 SSTRVSVYEKMFILTINDGIPLQCAEAYLFVYRTPNVTPMLIKYPKIEIPLSALGNSGSLDAETKYCESEQPKRKQEMFPVTETRPKFIAAVKKMLPIMLRIRDFGCTENASGFIQQVQGRAYDNTDLEAVISYAHSVAYQYGFCV 147
            SS  VSVY+KMFILT+N+     C E YL VYR P VTPM+IK+P +E PL+  G SGS D E ++C+ EQ K+K  +FPVTET+ +F AAVK MLP +  IRDFGCT    GFI QVQGRAYDN D+  +++Y H+VA++Y  C+
Sbjct:   50 SSDYVSVYKKMFILTLNENPSPACPERYLVVYRNPKVTPMIIKHPYLEFPLNG-GASGS-DVE-EWCKKEQQKKKTVLFPVTETKKEFTAAVKAMLPRLKAIRDFGCTATKEGFIIQVQGRAYDNVDVADIMAYLHAVAFKYELCL 192
The following BLAST results are available for this feature:
BLAST of Gcaud200.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMG5_9FLOR1.510e-4656.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1898_length_7812_cov_5.919700contigNODE_1898_length_7812_cov_5.919700:6587..7030 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud200.t1Gcaud200.t1Gracilaria caudata M_176_S67 malemRNANODE_1898_length_7812_cov_5.919700 6587..7030 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud200.t1 ID=Gcaud200.t1|Name=Gcaud200.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=148bp
MSSTRVSVYEKMFILTINDGIPLQCAEAYLFVYRTPNVTPMLIKYPKIEI
PLSALGNSGSLDAETKYCESEQPKRKQEMFPVTETRPKFIAAVKKMLPIM
LRIRDFGCTENASGFIQQVQGRAYDNTDLEAVISYAHSVAYQYGFCV*
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