Gcaud199.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud199.t1
Unique NameGcaud199.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length243
Homology
BLAST of Gcaud199.t1 vs. uniprot
Match: A0A2V3IUZ8_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUZ8_9FLOR)

HSP 1 Score: 154 bits (390), Expect = 5.670e-42
Identity = 78/119 (65.55%), Postives = 99/119 (83.19%), Query Frame = 0
Query:  123 EKELISAFKEKFSRRVEVAFISEIGTTAVSFNGNLESVLLLENQIVDTPSLESALRPSIDLLTDNVITSMEERFDEIKYYTAAKTFTQLDISRDSYTSDDPTLAEVIKKLDEEESIVYD 241
            ++EL  A KE F++R+EVA I+ +GT A SFNGNLES+L+LENQIV+ P+LES LRPSID+LT +V  SM+ERFD I Y +AA+TFTQLDI R+S+TSDDP++AE IKKLD EESI +D
Sbjct:  212 KEELQRAIKENFTKRIEVALINVLGTAAASFNGNLESILILENQIVENPALESVLRPSIDVLTVSVADSMDERFDAISYESAAETFTQLDIPRNSFTSDDPSVAEAIKKLDAEESIKFD 330          
BLAST of Gcaud199.t1 vs. uniprot
Match: A0A2V3IV19_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV19_9FLOR)

HSP 1 Score: 99.0 bits (245), Expect = 8.120e-21
Identity = 56/144 (38.89%), Postives = 89/144 (61.81%), Query Frame = 0
Query:   97 LEVMAGDQLHVVLAPERDLEKVHVLGEKELISAFKEKFSRRVEVAFISEIGTTAVSFNGNLESVLLLENQIVDTPSLESALRPSIDLLTDNVITSMEERFDEIKYYTAAKTFTQLDISRDSYTSDDPTLAEVIKKLDEEESIVY 240
            L ++A   L V+ A E   ++       EL    +E F RRV VAF++ + + AVS NGN+ES+LLLE+     P ++  L+ +IDLLT+ + +S+EE +D + Y   A+T+T LD +R S+  +DP+L EVI +++ EE I +
Sbjct:  192 LGIVADVALSVIAAVEGAKQR------DELRKQIEENFKRRVTVAFLTALASAAVSMNGNIESILLLESMKGKDPKVDKNLQEAIDLLTEPIASSIEEMWDLVSYENVAETWTNLDRNRGSWMDEDPSLKEVITEMETEEEIDF 329          
BLAST of Gcaud199.t1 vs. uniprot
Match: A0A2V3ILL6_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILL6_9FLOR)

HSP 1 Score: 58.9 bits (141), Expect = 1.320e-6
Identity = 30/109 (27.52%), Postives = 59/109 (54.13%), Query Frame = 0
Query:  124 KELISAFKEKFSRRVEVAFISEIGTTAVSFNGNLESVLLLENQIVDTPSLESALRPSIDLLTDNVITSMEERFDEIKYYTAAKTFTQLDISRDSYTSDDPTLAEVIKKL 232
            K L S   + F +R+ +  +      +V+  G +ES L + +++    +++S+L+ ++D+L  + I  +   +D      AA  +   D+ R SYT DDP++ ++IKKL
Sbjct:  206 KVLRSEINDFFRKRLSLELVDNFCAVSVAVTGKIESALTIVSKMRGIEAIDSSLQKAVDILVSSFIGEIGSVWDAGDLDAAASAWAATDLERKSYTDDDPSIDDIIKKL 314          
The following BLAST results are available for this feature:
BLAST of Gcaud199.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IUZ8_9FLOR5.670e-4265.55Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IV19_9FLOR8.120e-2138.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILL6_9FLOR1.320e-627.52Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1898_length_7812_cov_5.919700contigNODE_1898_length_7812_cov_5.919700:3758..5608 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud199.t1Gcaud199.t1Gracilaria caudata M_176_S67 malemRNANODE_1898_length_7812_cov_5.919700 3758..5608 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud199.t1 ID=Gcaud199.t1|Name=Gcaud199.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=243bp
MASPSTQASNNETVLVSVRHPNGIDFQAYQRSNNPVNNRCFIIRNVHGEF
GNPVRVVCFIDLKVYCHGNTKQRIMTQLGLPAPSRRGRMQLTNEHLLEVM
AGDQLHVVLAPERDLEKVHVLGEKELISAFKEKFSRRVEVAFISEIGTTA
VSFNGNLESVLLLENQIVDTPSLESALRPSIDLLTDNVITSMEERFDEIK
YYTAAKTFTQLDISRDSYTSDDPTLAEVIKKLDEEESIVYDD*
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