Gcaud1982.t2 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud1982.t2
Unique Name	Gcaud1982.t2
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	219

Homology

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BLAST of Gcaud1982.t2 vs. uniprot
Match: A0A2V3INP9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INP9_9FLOR)

HSP 1 Score: 191 bits (486), Expect = 7.040e-56
Identity = 112/220 (50.91%), Postives = 140/220 (63.64%), Query Frame = 0

Query:    1 MRSTGTFVGRGPAPLRNYSESTITGDWMRAPLQPREEDXXXXXXXXXXXXXXGGNFEPASGASLLDADEDPLELPKHSSPRSPGDRRRGIYRSRSKSSVRQYAQGNGSTR-DPRSFSWKSMFPKETEVDPSAGDKQPDRGEDMQNPSKGAVFG-KATGDEWDSYRSGEDPLVSAGEMDPLEENGGEGLGPEVSLEKGSEEQERLRAWRMSAEEASSSVRR 218
            MR+TGTFVGRGPAPLRNYSES +T DWM AP  P   +                 +EPASGASLL+ADEDPL+LP H SPRSPGDR+R ++ +  KS  R+Y   NG    DP  FSWKSMFP+    + +    + ++ +DMQ PS+GAVFG +   D+W+ YR  ++   S  E  PLE    EG   +  L + S+EQERLRAWRMSA+EASS VRR
Sbjct:  188 MRATGTFVGRGPAPLRNYSESMVTRDWMSAPPPPTPGEEADEDSERGVE-----GYEPASGASLLEADEDPLQLPAHDSPRSPGDRKRAVFGN--KSVTRRYPHENGRRDGDPTLFSWKSMFPRSGNSETAEVSVEVNQSDDMQTPSQGAVFGAEEQKDDWELYRGNDERASSPPEFKPLEALDEEGEQNDSDLRQDSDEQERLRAWRMSAQEASSIVRR 400

The following BLAST results are available for this feature:

BLAST of Gcaud1982.t2 vs. uniprot

BLAST of Gcaud1982.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3INP9_9FLOR	7.040e-56	50.91	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..218
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..115

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_5_length_105932_cov_4.447794	contig	NODE_5_length_105932_cov_4.447794:11819..12475 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud1982.t2	Gcaud1982.t2	Gracilaria caudata M_176_S67 male	mRNA	NODE_5_length_105932_cov_4.447794 11819..12475 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud1982.t2 ID=Gcaud1982.t2|Name=Gcaud1982.t2|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=219bp
MRSTGTFVGRGPAPLRNYSESTITGDWMRAPLQPREEDEDGEEDEDEGRG
KGGGNFEPASGASLLDADEDPLELPKHSSPRSPGDRRRGIYRSRSKSSVR
QYAQGNGSTRDPRSFSWKSMFPKETEVDPSAGDKQPDRGEDMQNPSKGAV
FGKATGDEWDSYRSGEDPLVSAGEMDPLEENGGEGLGPEVSLEKGSEEQE
RLRAWRMSAEEASSSVRR*