Gcaud195.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud195.t1
Unique NameGcaud195.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length267
Homology
BLAST of Gcaud195.t1 vs. uniprot
Match: A0A2V3ISB8_9FLOR (Putative mitochondrial chaperone BCS1-A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISB8_9FLOR)

HSP 1 Score: 390 bits (1002), Expect = 1.570e-131
Identity = 188/266 (70.68%), Postives = 222/266 (83.46%), Query Frame = 0
Query:    1 LQWSYDRSSPDHQGRKYNLYRFTVDQQSGQGDWDEEGARHARPHDSVVLADGQMEAIIEDMEQFIHPNSKSWYIEHGLPHRRSYLFEGVPGTGKTSTIRVLAGKYSLSCCFLSMTSEKFSNQQLNDALSGVPSNALLVLEDVDALFKEDRSSANSSSLTFSGLLNALDGVTSTEGLITIITTNHADRLDPALIRGGRVDRCFRFAPPSEKQLGILLKLFYKDASEEMVKQFIEIIVGWGESHEAPTIATLQQLFIRYRGCSVETCV 266
            LQWS DRS+PDH GRKYNLYRF VD   G G W+E+G+R  RPH+SV+L +GQM AI+ED+EQF+HP++K WYI+HGLPHRRS+LFEG PGTGKTSTIRV+AG+YSLSCCFLSMT+EKFSNQ L DALS +PSNALLVLEDVDALF  DR+SA+SSSLTFSGLLN LDGVTS EGLITI+TTNHA+RLDPALIRGGR+DR F F  PSEK+L  L ++FY+DA EE+V QF+  +  W ++    T+ATLQQ FI +RG S E CV
Sbjct:  211 LQWSVDRSNPDHNGRKYNLYRFKVDS-CGVGSWEEQGSRRGRPHESVLLREGQMGAILEDIEQFLHPDAKDWYIQHGLPHRRSFLFEGSPGTGKTSTIRVIAGQYSLSCCFLSMTNEKFSNQLLCDALSELPSNALLVLEDVDALFNADRTSASSSSLTFSGLLNVLDGVTSVEGLITIMTTNHANRLDPALIRGGRIDRRFCFTAPSEKELAALFRMFYEDAPEELVNQFVTEVAEWKKNGHEATVATLQQFFISFRGRSAEKCV 475          
BLAST of Gcaud195.t1 vs. uniprot
Match: A0A2V3IV90_9FLOR (Mitochondrial chaperone BCS1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV90_9FLOR)

HSP 1 Score: 305 bits (780), Expect = 3.210e-97
Identity = 143/266 (53.76%), Postives = 192/266 (72.18%), Query Frame = 0
Query:    1 LQWSYDRSSPDHQGRKYNLYRFTVDQQSGQGDWDEEGARHARPHDSVVLADGQMEAIIEDMEQFIHPNSKSWYIEHGLPHRRSYLFEGVPGTGKTSTIRVLAGKYSLSCCFLSMTSEKFSNQQLNDALSGVPSNALLVLEDVDALFKEDRSSANSSSLTFSGLLNALDGVTSTEGLITIITTNHADRLDPALIRGGRVDRCFRFAPPSEKQLGILLKLFYKDASEEMVKQFIEIIVGWGESHEAPTIATLQQLFIRYRGCSVETCV 266
            + W  D+ +    G+++ +YR  V+   G   WD EG + +RP DSV+L + QME I+ D  +F+ P +K WY+ HGLP+RRSYLF G PGTGKTSTIRVLAG + L CCFL++TS  FSNQ + DA+  +PSN +LVLEDVDALF EDR S   +SLTFSGLLNALDG+TS EG+ITI+++NH ++LDPALIRGGRVD+ F F  P+ + +  + K FY D SE++ K+F + ++   E  EA ++ATLQQLFI +RG + ETC+
Sbjct:  278 IHWYEDKKNNRRDGKRFAVYRLKVES-CGDCSWDYEGMKRSRPVDSVILGNNQMETIVRDTHKFLRPTTKKWYVRHGLPYRRSYLFYGSPGTGKTSTIRVLAGLFRLDCCFLTLTSHNFSNQTMLDAMKSIPSNGILVLEDVDALFNEDRKSETPASLTFSGLLNALDGITSAEGIITILSSNHIEKLDPALIRGGRVDKRFHFEKPNAEHIEQIFKNFYPDTSEDITKRFSQSVLSRKEGDEARSMATLQQLFIHFRGETAETCI 542          
BLAST of Gcaud195.t1 vs. uniprot
Match: A0A2V3IN40_9FLOR (Putative mitochondrial chaperone BCS1-B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN40_9FLOR)

HSP 1 Score: 281 bits (720), Expect = 1.700e-88
Identity = 147/268 (54.85%), Postives = 185/268 (69.03%), Query Frame = 0
Query:    1 LQWSYDRSSPDHQGR--KYNLYRFTVDQQSGQGDWDEEGARHARPHDSVVLADGQMEAIIEDMEQFIHPNSKSWYIEHGLPHRRSYLFEGVPGTGKTSTIRVLAGKYSLSCCFLSMTSEKFSNQQLNDALSGVPSNALLVLEDVDALFKEDRSSANSSSLTFSGLLNALDGVTSTEGLITIITTNHADRLDPALIRGGRVDRCFRFAPPSEKQLGILLKLFYKDASEEMVKQFIEIIVGWGESHEAPTIATLQQLFIRYRGCSVETCV 266
            L+W  +R   +H+ +  K++L+RF      G GDW  +G + ARP  SV+L  GQM+ II D++ F+  ++K WY  HGLPHRRSYLF G PG GKTSTIRV+AG + L+ CFLS+T+  FSNQ L+DAL+ +P  ALLVLEDVD LF EDR S  SSSLTFSG+LNALDG+ S +G+ITI TTNH ++LDPALIR GRVDR F F  P+  Q+  L K FY  AS+E+ K F + +    E  EA +IATLQQ FI  R  S E CV
Sbjct:  255 LKWRTERDQANHRAKPGKFSLFRFRTSGH-GSGDWSNQGFKKARPPKSVILQHGQMDTIICDIKDFLSRDTKGWYQTHGLPHRRSYLFYGPPGVGKTSTIRVIAGMFRLNACFLSLTAADFSNQALHDALTSLPRCALLVLEDVDVLFNEDRKSETSSSLTFSGMLNALDGLISIDGIITIFTTNHIEKLDPALIRAGRVDRRFEFVHPNTDQMCALFKSFYNSASDELAKSFAKTVFDRPEE-EARSIATLQQHFIYTRKKSAEECV 520          
BLAST of Gcaud195.t1 vs. uniprot
Match: R7QR17_CHOCR (AAA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR17_CHOCR)

HSP 1 Score: 272 bits (695), Expect = 2.220e-87
Identity = 137/264 (51.89%), Postives = 183/264 (69.32%), Query Frame = 0
Query:    2 QWSYDRSSPDHQGRKYNLYRFTVDQQSGQGDWDEEGARHARPHDSVVLADGQMEAIIEDMEQFIHPNSKSWYIEHGLPHRRSYLFEGVPGTGKTSTIRVLAGKYSLSCCFLSMTSEKFSNQQLNDALSGVPSNALLVLEDVDALFKEDRSSANSSSLTFSGLLNALDGVTSTEGLITIITTNHADRLDPALIRGGRVDRCFRFAPPSEKQLGILLKLFYKDASEEMVKQFIEIIVGWGESHEAPTIATLQQLFIRYRGCSVETC 265
            QWS D+   D    K++LYR+     SGQ  W  EG + +R   SV+L   +M  I+ED++ F+   ++ WY+EHG+PHRRS+LF G PGTGKTSTIRV+A ++ L+CCFLSMT+  FSNQ L  AL+ +P+NALLVLEDVDALF +DR+SA + +L+FS  LNALDG+ S +G+IT++TTNH  +LD ALIRGGRVDR F F  P E+Q+  L   FY +A +E+ ++F+  +       EA +IATLQQLFI  R  S E C
Sbjct:   44 QWSVDKDIYDGNDHKFSLYRYQFCYGSGQ--WSLEGVKRSRTPASVILPAMRMNNILEDVKHFLKVETRKWYVEHGMPHRRSFLFFGPPGTGKTSTIRVIASQFQLNCCFLSMTNPGFSNQDLAQALTVIPANALLVLEDVDALFNKDRTSAEAPNLSFSSFLNALDGLISADGVITVMTTNHIAKLDSALIRGGRVDRRFHFPSPDEEQIKQLFMSFYPEAGQEVAQEFVRAVFSRLGDKEARSIATLQQLFIDQRENSAEEC 305          
BLAST of Gcaud195.t1 vs. uniprot
Match: R7QRT0_CHOCR (AAA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRT0_CHOCR)

HSP 1 Score: 276 bits (705), Expect = 2.300e-86
Identity = 137/264 (51.89%), Postives = 184/264 (69.70%), Query Frame = 0
Query:    2 QWSYDRSSPDHQGRKYNLYRFTVDQQSGQGDWDEEGARHARPHDSVVLADGQMEAIIEDMEQFIHPNSKSWYIEHGLPHRRSYLFEGVPGTGKTSTIRVLAGKYSLSCCFLSMTSEKFSNQQLNDALSGVPSNALLVLEDVDALFKEDRSSANSSSLTFSGLLNALDGVTSTEGLITIITTNHADRLDPALIRGGRVDRCFRFAPPSEKQLGILLKLFYKDASEEMVKQFIEIIVGWGESHEAPTIATLQQLFIRYRGCSVETC 265
            QWS D+   D    K++LYR+    + G G W  EG + +R   SV+L   +M  I+ED++ F+   ++ WY+EHG+PHRRS+LF G PGTGKTSTIRV+A ++ L+CCFLSMT+ KFSNQ L  AL+ +P+NALLVLEDVDALF +DR+SA + +L+FS  LNALDG+ S +G+IT++TTNH  +LD ALIRGGRVDR F F  P E+Q+  L   FY +A +E+ ++F+  +       EA +IATLQQLFI  R  S E C
Sbjct:  245 QWSVDKDIYDGNDHKFSLYRYQF--RHGSGKWSLEGVKRSRTPASVILPAMRMNNILEDVKHFLKVETRKWYVEHGMPHRRSFLFFGPPGTGKTSTIRVIASQFQLNCCFLSMTNPKFSNQDLAQALTVIPANALLVLEDVDALFNKDRTSAEAPNLSFSSFLNALDGLISADGVITVMTTNHIAKLDSALIRGGRVDRRFHFPSPDEEQIQQLFMSFYPEAGQEVAQKFVRAVFSRLGDKEARSIATLQQLFIDQRENSAEEC 506          
BLAST of Gcaud195.t1 vs. uniprot
Match: R7QI29_CHOCR (AAA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI29_CHOCR)

HSP 1 Score: 271 bits (694), Expect = 4.440e-84
Identity = 136/264 (51.52%), Postives = 184/264 (69.70%), Query Frame = 0
Query:    2 QWSYDRSSPDHQGRKYNLYRFTVDQQSGQGDWDEEGARHARPHDSVVLADGQMEAIIEDMEQFIHPNSKSWYIEHGLPHRRSYLFEGVPGTGKTSTIRVLAGKYSLSCCFLSMTSEKFSNQQLNDALSGVPSNALLVLEDVDALFKEDRSSANSSSLTFSGLLNALDGVTSTEGLITIITTNHADRLDPALIRGGRVDRCFRFAPPSEKQLGILLKLFYKDASEEMVKQFIEIIVGWGESHEAPTIATLQQLFIRYRGCSVETC 265
            QWS D+   D    K++LYR+      G+G W  EG + +R   SV+L   QM+ I+ED++QF+   ++ WY+EHG+PHRRS+LF G PGTGKTSTIRV+A ++ L+CCFLSMT+ +FSNQ L  AL+ +P+NALLV EDVDALF +DR+SA +  L+FS  LNALDG+ S +G+IT++TTN+  +LD ALIRGGRVDR   F  P E+Q+  L   FY +A +E+ ++F+  +    E  EA +IATLQQLFI  R  S E C
Sbjct:  303 QWSVDKDIYDGMDHKFSLYRYQFFC-PGRGRWFLEGLKRSRTPASVILPAKQMDYILEDVKQFLKMETRKWYVEHGMPHRRSFLFFGPPGTGKTSTIRVIASQFQLNCCFLSMTNPEFSNQDLAQALTAIPANALLVFEDVDALFNKDRTSAEAPKLSFSSFLNALDGLISADGVITVMTTNNIAKLDSALIRGGRVDRRVHFPSPDEEQIKELFMSFYPEARQEVAQEFVSAVFSRFEDKEARSIATLQQLFIDQRENSAEEC 565          
BLAST of Gcaud195.t1 vs. uniprot
Match: R7QJY8_CHOCR (AAA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJY8_CHOCR)

HSP 1 Score: 271 bits (692), Expect = 1.840e-82
Identity = 139/268 (51.87%), Postives = 184/268 (68.66%), Query Frame = 0
Query:    1 LQWSYDRSSPDHQGR--KYNLYRFTVDQQSGQGDWDEEGARHARPHDSVVLADGQMEAIIEDMEQFIHPNSKSWYIEHGLPHRRSYLFEGVPGTGKTSTIRVLAGKYSLSCCFLSMTSEKFSNQQLNDALSGVPSNALLVLEDVDALFKEDRSSANSSSLTFSGLLNALDGVTSTEGLITIITTNHADRLDPALIRGGRVDRCFRFAPPSEKQLGILLKLFYKDASEEMVKQFIEIIVGWGESHEAPTIATLQQLFIRYRGCSVETCV 266
            L+W  DR   +   R  ++ L+R+      GQGDW  +G + +R   SV+L DGQ+EAI++D+  F+  ++K WY  HGLPHRRSYLF G PG GKTSTIR+LAG + L+ CFLS T+  FSNQ L DALS +P  ALLV+EDVD LF EDR S  S +LTFSG+LN +DG+ ST+G++TI TTNH ++LDPALIRGGR+DR F F  P+ K +  L   FY++AS+E+ ++F + ++   E  EA +IATLQQ FI  R    ET V
Sbjct:  444 LKWRSDREQANMTPRPGRFTLFRYKT--HGGQGDWCNQGYKRSRSPKSVILPDGQLEAIVKDIRDFVAKDTKMWYETHGLPHRRSYLFHGPPGCGKTSTIRMLAGLFRLNACFLSFTASDFSNQVLQDALSSLPRRALLVMEDVDVLFNEDRKSEVSPALTFSGMLNGMDGLVSTDGILTIYTTNHIEKLDPALIRGGRIDRRFEFVHPNHKHMCSLFLSFYENASKEVAERFADEVLNRPEE-EARSIATLQQHFIFTRKYDAETSV 708          
BLAST of Gcaud195.t1 vs. uniprot
Match: A0A1X6NZ17_PORUM (AAA domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZ17_PORUM)

HSP 1 Score: 224 bits (571), Expect = 8.030e-66
Identity = 121/269 (44.98%), Postives = 165/269 (61.34%), Query Frame = 0
Query:    1 LQWSYDRSSPDHQGRKYNLYRFTVDQQSGQGDWDEEGARHARPHDSVVLADGQMEAIIEDMEQFIHPNSKSWYIEHGLPHRRSYLFEGVPGTGKTSTIRVLAGKYSLSCCFLSMTSEKFSNQQLNDALSGVPSNALLVLEDVDALFKEDR-SSANSSSLTFSGLLNALDGVTSTEGLITIITTNH-ADRLDPALIRGGRVDRCFRFAPPSEKQLGILLKLFYKDASEEMVKQF-IEIIVGWGESHEAPTIATLQQLFIRYRGCSVETCV 266
            + WS    +P      + L+RF  D ++ +  W  EG +  RP  SV+L DG  EA+  D+E F+ P +K+WY  HG+P+RRSYL  G PG+GKTSTIR LA  + L+ CFL++T+  F+NQ L DAL+ +P  +LLV+EDVDALF  DR ++A + +LTFSGLLNALDG+ + E L+  +TTN     LD AL+RGGRVD  + F  P   QL  L   +Y  A  EM   F  +++ G G      ++A  QQLFIR R  S   C+
Sbjct:  268 VDWSLALYAPPPAASAFRLFRFRTDDRASKSMWVAEGDKPGRPLSSVILPDGMAEALKADVEAFLSPPTKAWYRSHGVPYRRSYLLHGPPGSGKTSTIRALASTFRLTACFLAVTNGNFNNQILGDALASLPRASLLVIEDVDALFTVDRVATAAAGALTFSGLLNALDGLIAAESLLVAMTTNKPVTALDEALVRGGRVDSRWSFEAPCASQLARLFASYYPKADSEMGTAFGAQMVDGLGGGEGGGSMAAAQQLFIRCREASAADCL 536          
BLAST of Gcaud195.t1 vs. uniprot
Match: A0A1X6NMS8_PORUM (AAA domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMS8_PORUM)

HSP 1 Score: 224 bits (571), Expect = 1.520e-65
Identity = 123/268 (45.90%), Postives = 165/268 (61.57%), Query Frame = 0
Query:    1 LQWSYDRSSPDHQGRKYNLYRFTVDQQSGQGDWDEEGARHARPHDSVVLADGQMEAIIEDMEQFIHPNSKSWYIEHGLPHRRSYLFEGVPGTGKTSTIRVLAGKYSLSCCFLSMTSEKFSNQQLNDALSGVPSNALLVLEDVDALFKEDRSSANSS-SLTFSGLLNALDGVTSTEGLITIITTNHA-DRLDPALIRGGRVDRCFRFAPPSEKQLGILLKLFYKDASEEMVKQFIEIIVGWGESHEAPTIATLQQLFIRYRGCSVETCV 266
            L W      P+     + L+RF  D  + +G W+ EG +  R   SV+L +G + +++ D+   + P ++SWY  HGLP+RRSYLF G PG+GKTS IR LA  + LS C+LSMT+ +F+NQ L DAL  +PS ALLV+EDVDALF   RS+  ++ +LTFSGLLN LDG+T+ E ++  +TTN   D LDPALIRGGRVDR + F  P+  QL  L   +Y DA       F   ++  G   EA ++A  QQLFIR R  S    V
Sbjct:  250 LAWRAAVYVPEPTPAFFELHRFKTDADASEGHWEFEGEKRGRLLSSVILPNGVVSSMVADVRALLSPMTRSWYRRHGLPYRRSYLFHGTPGSGKTSIIRGLASSFGLSACYLSMTNGRFNNQVLMDALETLPSKALLVIEDVDALFGAHRSATRAAGALTFSGLLNCLDGLTAAESVLVAMTTNKGVDELDPALIRGGRVDRRWAFRAPTAGQLARLFGTYYPDAGAATGASFAAALMD-GLGAEAVSMAAAQQLFIRARTASAAEAV 516          
BLAST of Gcaud195.t1 vs. uniprot
Match: A0A1X6NWV9_PORUM (AAA domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWV9_PORUM)

HSP 1 Score: 219 bits (557), Expect = 3.240e-64
Identity = 124/271 (45.76%), Postives = 166/271 (61.25%), Query Frame = 0
Query:    1 LQWSYDRSSPDHQGRKYNLYRFTVDQQSGQGDWDEEGARHARPHDSVVLADGQMEAIIEDMEQFIHPNSKSWYIEHGLPHRRSYLFEGVPGTGKTSTIRVLAGKYSLSCCFLSMTSEKFSNQQLNDALSGVPSNALLVLEDVDALFKEDR-SSANSSSLTFSGLLNALDGVTSTEGLITIITTNHA-DRLDPALIRGGRVDRCFRFAPPSEKQLGILLKLFYKDASEEMVKQF---IEIIVGWGESHEAPTIATLQQLFIRYRGCSVETCV 266
            +QW    +       ++ LYRF+    S  G W  +G    R   SVVL DG    ++ D+  F+ P +K+WY  HGLP+RRSYL  GVPG+GKTS I  LA  + L+ CFL++TS +F+NQ L  AL  +P++ALLVLEDVDALF   R ++A +  +TFSGLLNALDG+ + + ++ ++TTN A   LDPALIRGGRVDR + F PP+  QLG L + +Y  A  E+   F   +E  +G G S     +A  QQLFIR RG S    V
Sbjct:  255 VQWHMAVNKTKPTRLRFGLYRFSASPCSTMGRWLSDGHHPGRRLSSVVLPDGMARDVVTDVLSFLSPTTKTWYRHHGLPYRRSYLLHGVPGSGKTSLIVALASTFQLTACFLTVTSGRFNNQLLGSALRSLPAHALLVLEDVDALFGGGRKATAAAGEVTFSGLLNALDGLAAADSVLVVLTTNMAVGDLDPALIRGGRVDRLWAFGPPTGAQLGDLFRSYYPGADAEVAASFGAAMEAGLGPGVS-----MAAAQQLFIRCRGGSAADAV 520          
The following BLAST results are available for this feature:
BLAST of Gcaud195.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISB8_9FLOR1.570e-13170.68Putative mitochondrial chaperone BCS1-A n=1 Tax=Gr... [more]
A0A2V3IV90_9FLOR3.210e-9753.76Mitochondrial chaperone BCS1 n=1 Tax=Gracilariopsi... [more]
A0A2V3IN40_9FLOR1.700e-8854.85Putative mitochondrial chaperone BCS1-B n=1 Tax=Gr... [more]
R7QR17_CHOCR2.220e-8751.89AAA domain-containing protein n=1 Tax=Chondrus cri... [more]
R7QRT0_CHOCR2.300e-8651.89AAA domain-containing protein n=1 Tax=Chondrus cri... [more]
R7QI29_CHOCR4.440e-8451.52AAA domain-containing protein n=1 Tax=Chondrus cri... [more]
R7QJY8_CHOCR1.840e-8251.87AAA domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A1X6NZ17_PORUM8.030e-6644.98AAA domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A1X6NMS8_PORUM1.520e-6545.90AAA domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A1X6NWV9_PORUM3.240e-6445.76AAA domain-containing protein n=1 Tax=Porphyra umb... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 80..208
e-value: 3.5E-8
score: 43.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 37..207
e-value: 8.1E-35
score: 122.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 41..237
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 85..204
e-value: 1.2E-18
score: 67.8
NoneNo IPR availablePANTHERPTHR23070:SF151MITOCHONDRIAL CHAPERONE BCS1coord: 14..257
NoneNo IPR availablePANTHERPTHR23070BCS1 AAA-TYPE ATPASEcoord: 14..257
NoneNo IPR availableCDDcd00009AAAcoord: 78..206
e-value: 6.684E-7
score: 45.9851
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 176..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_7892_length_836_cov_4.359732contigNODE_7892_length_836_cov_4.359732:2..800 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud195.t1Gcaud195.t1Gracilaria caudata M_176_S67 malemRNANODE_7892_length_836_cov_4.359732 2..800 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud195.t1 ID=Gcaud195.t1|Name=Gcaud195.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=267bp
LQWSYDRSSPDHQGRKYNLYRFTVDQQSGQGDWDEEGARHARPHDSVVLA
DGQMEAIIEDMEQFIHPNSKSWYIEHGLPHRRSYLFEGVPGTGKTSTIRV
LAGKYSLSCCFLSMTSEKFSNQQLNDALSGVPSNALLVLEDVDALFKEDR
SSANSSSLTFSGLLNALDGVTSTEGLITIITTNHADRLDPALIRGGRVDR
CFRFAPPSEKQLGILLKLFYKDASEEMVKQFIEIIVGWGESHEAPTIATL
QQLFIRYRGCSVETCVX
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003960ATPase_AAA_CS