Gcaud1949.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1949.t1
Unique NameGcaud1949.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length73
Homology
BLAST of Gcaud1949.t1 vs. uniprot
Match: A0A2V3IXD2_9FLOR (Protein kish n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXD2_9FLOR)

HSP 1 Score: 120 bits (301), Expect = 2.410e-34
Identity = 59/72 (81.94%), Postives = 66/72 (91.67%), Query Frame = 0
Query:    1 MSAIFNFQSLLIVILLVICTCAYIRSMYPSLLDRNKQGFLGVFWKAARIGERLSATVAACCAIMALALLFGK 72
            MSA+FNF+SLLIVILLVICTCAYIRSMYPSLLDRNK GFLG+FWKAARIGERLS  V+ACCA+MA++L   K
Sbjct:    1 MSAVFNFESLLIVILLVICTCAYIRSMYPSLLDRNKTGFLGIFWKAARIGERLSPFVSACCAVMAISLFLNK 72          
BLAST of Gcaud1949.t1 vs. uniprot
Match: M2XY25_GALSU (Protein kish n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XY25_GALSU)

HSP 1 Score: 116 bits (290), Expect = 1.150e-32
Identity = 56/72 (77.78%), Postives = 66/72 (91.67%), Query Frame = 0
Query:    1 MSAIFNFQSLLIVILLVICTCAYIRSMYPSLLDRNKQGFLGVFWKAARIGERLSATVAACCAIMALALLFGK 72
            MSA+FNFQSLL+VI+LVICTCAYIRS+YPSLLDRNK+GFLG+FWKA+RIGERLS  V+ CC +MAL+LLF  
Sbjct:    1 MSALFNFQSLLVVIVLVICTCAYIRSLYPSLLDRNKEGFLGLFWKASRIGERLSPYVSTCCFLMALSLLFAS 72          
BLAST of Gcaud1949.t1 vs. uniprot
Match: A0A1X6PGJ7_PORUM (Protein kish n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PGJ7_PORUM)

HSP 1 Score: 110 bits (275), Expect = 2.240e-30
Identity = 54/72 (75.00%), Postives = 64/72 (88.89%), Query Frame = 0
Query:    1 MSAIFNFQSLLIVILLVICTCAYIRSMYPSLLDRNKQGFLGVFWKAARIGERLSATVAACCAIMALALLFGK 72
            MSAIFNFQSLLIV+LL+ICTCAY+RS+YP+LLDRN+ GFLGVFWKAARIGERLS  V A C  M++++LF K
Sbjct:    1 MSAIFNFQSLLIVVLLLICTCAYMRSLYPALLDRNRTGFLGVFWKAARIGERLSPWVGAACLFMSISILFTK 72          
BLAST of Gcaud1949.t1 vs. uniprot
Match: A0A4D5RC41_IXOSC (Protein kish n=4 Tax=Ixodes TaxID=6944 RepID=A0A4D5RC41_IXOSC)

HSP 1 Score: 108 bits (270), Expect = 1.300e-29
Identity = 52/70 (74.29%), Postives = 60/70 (85.71%), Query Frame = 0
Query:    1 MSAIFNFQSLLIVILLVICTCAYIRSMYPSLLDRNKQGFLGVFWKAARIGERLSATVAACCAIMALALLF 70
            MSA+FNFQSLL V+LL+ICTCAY+RS+YPSLLDRNK+GFLG+FWK ARIGER S  VA CC  MA  +LF
Sbjct:    1 MSALFNFQSLLAVVLLLICTCAYVRSIYPSLLDRNKEGFLGIFWKCARIGERKSPWVAGCCIAMAFTILF 70          
BLAST of Gcaud1949.t1 vs. uniprot
Match: A0A6J1T476_FRAOC (Protein kish n=1 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1T476_FRAOC)

HSP 1 Score: 108 bits (270), Expect = 1.300e-29
Identity = 53/70 (75.71%), Postives = 62/70 (88.57%), Query Frame = 0
Query:    1 MSAIFNFQSLLIVILLVICTCAYIRSMYPSLLDRNKQGFLGVFWKAARIGERLSATVAACCAIMALALLF 70
            MSA+FNFQSLL V+LL+ICTCAY+RS++PSL+DR+K GFLG FWK ARIGER S  VAACC IMAL+LLF
Sbjct:    1 MSALFNFQSLLTVVLLLICTCAYVRSIFPSLVDRHKSGFLGTFWKCARIGERKSPYVAACCVIMALSLLF 70          
BLAST of Gcaud1949.t1 vs. uniprot
Match: KISHA_DANRE (Protein kish-A n=1 Tax=Danio rerio TaxID=7955 RepID=KISHA_DANRE)

HSP 1 Score: 108 bits (269), Expect = 1.840e-29
Identity = 54/72 (75.00%), Postives = 61/72 (84.72%), Query Frame = 0
Query:    1 MSAIFNFQSLLIVILLVICTCAYIRSMYPSLLDRNKQGFLGVFWKAARIGERLSATVAACCAIMALALLFGK 72
            MSAIFNFQSLL VILL+ICTCAYIRS+ PSLLD+NK GFLG+FWK ARIGER S  VA CC +MAL +LF +
Sbjct:    1 MSAIFNFQSLLTVILLLICTCAYIRSLTPSLLDKNKTGFLGIFWKCARIGERKSPYVAFCCIVMALTILFSE 72          
BLAST of Gcaud1949.t1 vs. uniprot
Match: A0A6P9ADD2_THRPL (Protein kish n=1 Tax=Thrips palmi TaxID=161013 RepID=A0A6P9ADD2_THRPL)

HSP 1 Score: 108 bits (269), Expect = 1.840e-29
Identity = 55/70 (78.57%), Postives = 61/70 (87.14%), Query Frame = 0
Query:    1 MSAIFNFQSLLIVILLVICTCAYIRSMYPSLLDRNKQGFLGVFWKAARIGERLSATVAACCAIMALALLF 70
            MSAIFNFQSLL V+LLVICTCAYIRS++PS+LDRNK GFLG FWK ARIGER S  VAA C IMAL++LF
Sbjct:    1 MSAIFNFQSLLTVVLLVICTCAYIRSLFPSILDRNKVGFLGTFWKCARIGERKSPYVAASCVIMALSILF 70          
BLAST of Gcaud1949.t1 vs. uniprot
Match: A0A4V1J561_9FUNG (Protein kish n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4V1J561_9FUNG)

HSP 1 Score: 107 bits (267), Expect = 3.520e-29
Identity = 54/70 (77.14%), Postives = 63/70 (90.00%), Query Frame = 0
Query:    1 MSAIFNFQSLLIVILLVICTCAYIRSMYPSLLDRNKQGFLGVFWKAARIGERLSATVAACCAIMALALLF 70
            MSA+FNFQSLL+VILLVICTCAYIR+ +P LLDRNKQGFLG+FWKAARIGERLS  VA  C IMA++L++
Sbjct:    1 MSALFNFQSLLLVILLVICTCAYIRAQFPYLLDRNKQGFLGLFWKAARIGERLSPYVALACVIMAVSLVW 70          
BLAST of Gcaud1949.t1 vs. uniprot
Match: A0A7J6CML7_9TELE (Protein kish n=3 Tax=Otophysi TaxID=186626 RepID=A0A7J6CML7_9TELE)

HSP 1 Score: 107 bits (266), Expect = 5.290e-29
Identity = 53/72 (73.61%), Postives = 61/72 (84.72%), Query Frame = 0
Query:    1 MSAIFNFQSLLIVILLVICTCAYIRSMYPSLLDRNKQGFLGVFWKAARIGERLSATVAACCAIMALALLFGK 72
            MSAIFNFQSLL VILL+ICTCAYIR++ PSLLD+NK GFLG+FWK ARIGER S  VA CC IMA ++LF +
Sbjct:    1 MSAIFNFQSLLTVILLLICTCAYIRALAPSLLDKNKTGFLGIFWKCARIGERKSPYVACCCIIMAFSILFSE 72          
BLAST of Gcaud1949.t1 vs. uniprot
Match: F1R8Q0_DANRE (Protein kish n=12 Tax=Otomorpha TaxID=186634 RepID=F1R8Q0_DANRE)

HSP 1 Score: 106 bits (265), Expect = 7.510e-29
Identity = 53/72 (73.61%), Postives = 60/72 (83.33%), Query Frame = 0
Query:    1 MSAIFNFQSLLIVILLVICTCAYIRSMYPSLLDRNKQGFLGVFWKAARIGERLSATVAACCAIMALALLFGK 72
            MSAIFNFQSLL VILL+ICTCAYIRS+ PSLLD+NK GFLG+FWK ARIGER S  VA CC +MA  +LF +
Sbjct:    1 MSAIFNFQSLLTVILLLICTCAYIRSLTPSLLDKNKTGFLGIFWKCARIGERKSPYVAFCCIVMAFTILFSE 72          
The following BLAST results are available for this feature:
BLAST of Gcaud1949.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXD2_9FLOR2.410e-3481.94Protein kish n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
M2XY25_GALSU1.150e-3277.78Protein kish n=1 Tax=Galdieria sulphuraria TaxID=1... [more]
A0A1X6PGJ7_PORUM2.240e-3075.00Protein kish n=1 Tax=Porphyra umbilicalis TaxID=27... [more]
A0A4D5RC41_IXOSC1.300e-2974.29Protein kish n=4 Tax=Ixodes TaxID=6944 RepID=A0A4D... [more]
A0A6J1T476_FRAOC1.300e-2975.71Protein kish n=1 Tax=Frankliniella occidentalis Ta... [more]
KISHA_DANRE1.840e-2975.00Protein kish-A n=1 Tax=Danio rerio TaxID=7955 RepI... [more]
A0A6P9ADD2_THRPL1.840e-2978.57Protein kish n=1 Tax=Thrips palmi TaxID=161013 Rep... [more]
A0A4V1J561_9FUNG3.520e-2977.14Protein kish n=1 Tax=Dimargaris cristalligena TaxI... [more]
A0A7J6CML7_9TELE5.290e-2973.61Protein kish n=3 Tax=Otophysi TaxID=186626 RepID=A... [more]
F1R8Q0_DANRE7.510e-2973.61Protein kish n=12 Tax=Otomorpha TaxID=186634 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009653Protein kishPFAMPF06842DUF1242coord: 10..44
e-value: 1.5E-20
score: 72.8
NoneNo IPR availablePANTHERPTHR13229:SF2PROTEIN KISH-Acoord: 1..70
NoneNo IPR availablePANTHERPTHR13229PROTEIN KISH-Acoord: 1..70
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..52
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 72..72
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 49..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_821_length_17530_cov_5.307414contigNODE_821_length_17530_cov_5.307414:4477..4827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1949.t1Gcaud1949.t1Gracilaria caudata M_176_S67 malemRNANODE_821_length_17530_cov_5.307414 4477..4827 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1949.t1 ID=Gcaud1949.t1|Name=Gcaud1949.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=73bp
MSAIFNFQSLLIVILLVICTCAYIRSMYPSLLDRNKQGFLGVFWKAARIG
ERLSATVAACCAIMALALLFGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009653Ksh1