Gcaud1947.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1947.t1
Unique NameGcaud1947.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length323
Homology
BLAST of Gcaud1947.t1 vs. uniprot
Match: A0A2V3J5M9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5M9_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 5.480e-31
Identity = 79/140 (56.43%), Postives = 87/140 (62.14%), Query Frame = 0
Query:  149 LTGMLGKAVGADPGEGIEQTMKEKAVEEMIQDKVEEIAGETVANSEQVETIAXXXXXXXXXKVPTSMLGAGAMASMRDDDK--GGSGLMEQXXXXXXXXXXGEQ-------------------KKSDASDLMGQAASFLG 267
            LTGMLGKAVG DPGEG+EQTMKEKAVEE+IQDKVE+IAGE VA+SE VE IA         KVPTSMLGA AMA M+ DDK  G S LM+Q        XX                      K   A+DL+GQAASFLG
Sbjct:    4 LTGMLGKAVGGDPGEGLEQTMKEKAVEELIQDKVEDIAGEKVAHSEHVENIAEKIADAIGDKVPTSMLGASAMAGMKSDDKKEGASSLMDQASSLLGGSXXXXXXXXXXXXXXXXXXXXXXXXKDDGAADLLGQAASFLG 143          
BLAST of Gcaud1947.t1 vs. uniprot
Match: A0A2V3IGF5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGF5_9FLOR)

HSP 1 Score: 93.2 bits (230), Expect = 2.530e-19
Identity = 45/98 (45.92%), Postives = 66/98 (67.35%), Query Frame = 0
Query:   31 DTSERQKSSGCSLPPHVAYCADVMRVGSQLDHETAEHFADLQEEFVDRAIDDCSWESFDGKMGLDECVSTLSRFVEENPVEDEGEMAEMSIAERGIKI 128
            DT ER  S  C++P  VAYC DVMRVG++ + E+A+HFA L++   + A+++CSWESF+GK   DEC+STLSRF  EN V       ++  +E  +++
Sbjct:   27 DTEERM-SEPCNIPSDVAYCMDVMRVGTRFNDESAQHFARLEDLLSEHALEECSWESFEGKKSPDECISTLSRF-SENSVPPISSSTDLDFSEHIVRV 122          
BLAST of Gcaud1947.t1 vs. uniprot
Match: A0A2V3IE60_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IE60_9FLOR)

HSP 1 Score: 93.2 bits (230), Expect = 1.130e-18
Identity = 45/98 (45.92%), Postives = 66/98 (67.35%), Query Frame = 0
Query:   31 DTSERQKSSGCSLPPHVAYCADVMRVGSQLDHETAEHFADLQEEFVDRAIDDCSWESFDGKMGLDECVSTLSRFVEENPVEDEGEMAEMSIAERGIKI 128
            DT ER  S  C++P  VAYC DVMRVG++ + E+A+HFA L++   + A+++CSWESF+GK   DEC+STLSRF  EN V       ++  +E  +++
Sbjct:   84 DTEERM-SEPCNIPSDVAYCMDVMRVGTRFNDESAQHFARLEDLLSEHALEECSWESFEGKKSPDECISTLSRF-SENSVPPISSSTDLDFSEHIVRV 179          
BLAST of Gcaud1947.t1 vs. uniprot
Match: A0A2V3II71_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II71_9FLOR)

HSP 1 Score: 62.4 bits (150), Expect = 7.500e-8
Identity = 33/104 (31.73%), Postives = 57/104 (54.81%), Query Frame = 0
Query:   10 LGSAVLFGTALAAESYPDGMPDTSERQKSSGCSLPPHVAYCADVMRVGSQLDHETAEHFADLQEEFVDRAIDDCSWESFDGKMGLDECVSTLSRFVEENPVEDE 113
            L S VL   A +  + P   PD     ++  C +PP VAYC D+M +GS  + + ++  A+LQ +  +  I  C+W  + GK+  DEC+  L+ + +E+  +D+
Sbjct:    8 LASVVLCICAASVSAVPQ--PDEKALIEAE-CDVPPAVAYCLDMMHLGSNYNSDGSQESAELQHDVDEVPIGMCAWGDWVGKLSADECMQVLAEYEDEDDEDDD 108          
The following BLAST results are available for this feature:
BLAST of Gcaud1947.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J5M9_9FLOR5.480e-3156.43Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IGF5_9FLOR2.530e-1945.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IE60_9FLOR1.130e-1845.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II71_9FLOR7.500e-831.73Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..322
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_804_length_17738_cov_4.544908contigNODE_804_length_17738_cov_4.544908:13452..15746 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1947.t1Gcaud1947.t1Gracilaria caudata M_176_S67 malemRNANODE_804_length_17738_cov_4.544908 13452..15746 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1947.t1 ID=Gcaud1947.t1|Name=Gcaud1947.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=323bp
MKIICSLFILGSAVLFGTALAAESYPDGMPDTSERQKSSGCSLPPHVAYC
ADVMRVGSQLDHETAEHFADLQEEFVDRAIDDCSWESFDGKMGLDECVST
LSRFVEENPVEDEGEMAEMSIAERGIKIRCFPKYDIFHAVQYAPWIVPLT
GMLGKAVGADPGEGIEQTMKEKAVEEMIQDKVEEIAGETVANSEQVETIA
EKIADAVADKVPTSMLGAGAMASMRDDDKGGSGLMEQASSLLGGGGSGEQ
KKSDASDLMGQAASFLGGGGGDSGEQKKTDASDLMGQAASFLGSGGGGDD
DEKKKDAAEDLMGQAASFFGKQ*
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