Gcaud1945.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1945.t1
Unique NameGcaud1945.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length985
Homology
BLAST of Gcaud1945.t1 vs. uniprot
Match: A0A2V3ILQ5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILQ5_9FLOR)

HSP 1 Score: 1029 bits (2661), Expect = 0.000e+0
Identity = 516/961 (53.69%), Postives = 662/961 (68.89%), Query Frame = 0
Query:   20 VSSLPLAHVCRESDLTRAYYNKQAEQQRYEALLQRDVLAQFQNLSVPQFSDSKPAASQLFGKFRSFVAHPSELRPHVHPRVVFGRRHWNDLLEHHAESRRHGNEGTWSTYFERQTVWQGYLSEVIAYLAELEKKGLTSVYDGRPMSTGTGFETYRNSLRNLASTIEVMNSTLTPSLLFCAFWTGLSGKINQDFLPVYNTETCVKATVAWSKVLLAHRIYHCSPRCPFTVDDRSRSFLWNTRIPWKMRNDDYTAGFSLALAYDVLYDKMSIAEQRTVRSALAMLVMNRFSWGTCPVSSQHCPDVFTEPHKIVDANAMYHSNLFLTNLAIEGESDFDAYTIGVLRTHDADGFNSDFNFRFLSLLRAYMHHAVYPDGSTVQGSSFYTNGLREGSLALLAAQRRGLNLLDTPRFRNVVHYSSQIMEPWECGKLPGEAPEAIHNTFIALFNFLFPESEVISIMWRQRIGRLMPRSCSRLEWRSVTQLLFLAREPVPYKHNYVTLPASTYKYFPLKVYFAQRGLLVARTGLGNPYAYLQFDTRRDVVLDGRDSGGHGDLLFAVGGHTWLQSFGDHSREKSLLHIDGVAQENIAPPVKLIRIESEKGILIAVADLTYSYNIQWARGRGAQVRYNTVYDRKTTTAHRMAVSFSQRETQLPLSNISIPTNLGERLWRRKTRAEQAQRVTRSVCLLDG-RTSDLDPTEGALSGVLIISDYVNPGRGSHLIESYFALSNGTRVINLSCSQNPYEPQCALTLLSPKK-TKAVLHVLSSAPLRARTEDGDARLRIIVSADVRKPTRIWTGIAADDLPALKVRLLKEGLIVGHGKTFKFLHASHDGGIDYAREKWSGTLRNGDFVVLNATSMKPVLNGPQTFEASLNVSAESRSGMDDVISTCGHRTSVRTRIQVFLCESSVCKEVPGFRRPCSKASGRLEWRGQLVQGSVYNIRITVESVVGLQSSVEVRYRLR 978
            V S+P+  VC   +   A+      +QR    L++ +  + Q LS+  F   +  + +L G+ RS  A PSELRP+ HPR+VFGR  WNDLL+HH+E  R GN   WSTY E  TV +G LS+ I++LA LEK G TS YDGR +S    +++YR  L+ LAS++ +MNS   PS   CAFW+G+     Q  +  +  ETC+ A VAWSK+LLAHR YHC+P CPF V D  RSFLWN +IPWKMRNDDYTAG SLALAYDVLYDKMS +E+RT+RSALA+LVMNRF WG CP+SS+ CPDVF EPH+I ++ AMYHSNLFLTNLAIE E+ FD Y   VLR   ++GFN + +FRFL+L+RAYM + VY DGSTV+    +  G+REGSLAL+AA RRGLNLLDT RFRN++H+SSQI+EPW CGKL GE   A +N+F+ALFNFL+PESEV+S++WRQR+G L PRSCSRL WR+VTQ++ L R PV    N   L  +T + FPL V F  RGL VAR GL + +A L FD R DV LDGR  GG GD  FAV G TW++SFG  SRE+S+LHIDG+AQE IAPP ++  ++SE    + VADLTYSYN+QWARGR  Q RYN VYD    T+ R+A+ F + E  LP  NIS+P  +  R+W+R+ R E  ++V RSVC+L G R      + G+ +G LIISD+V+ G+G+H IESY ALS GT V N+SCS+NP +PQC++TL   KK T  V+HV ++  LR R E+   R RI+VS   R P R W  IA   + ALK+ L K+GL V HG+   FLHA+ DGG+   + + +  L  G  V L+ + M PVL G QTFEA+  + A+S    +D+ISTC H T+VRTRI VF C+   C+EV G   PCS ASGR EW G L  G+ Y+++I VES+ GL+S VEV +++R
Sbjct:   25 VYSIPVGDVCNPFERNLAFGEALTYEQRVARSLEKAIRTESQTLSL-SFDAEEATSLRLTGRIRSISAKPSELRPYSHPRIVFGRSAWNDLLQHHSERYRGGNRNDWSTYLEHHTVIRGPLSKTISHLANLEKNGFTSDYDGRAVSQNEAYKSYRRKLKTLASSVHLMNSIHAPSFFLCAFWSGVDELETQPQIG-HKAETCINAAVAWSKILLAHRAYHCNPVCPFAVHDPRRSFLWNVKIPWKMRNDDYTAGSSLALAYDVLYDKMSKSERRTIRSALALLVMNRFVWGICPISSKGCPDVFAEPHRIHNSKAMYHSNLFLTNLAIEAEAGFDNYAASVLREGRSNGFNYELHFRFLALMRAYMENGVYADGSTVEDGMAFVLGIREGSLALIAAYRRGLNLLDTARFRNLIHHSSQIIEPWGCGKLLGETSRATYNSFVALFNFLYPESEVVSVLWRQRMGSLKPRSCSRLPWRTVTQIVLLGRAPVLDTQNLDVLSRATEEVFPLNVLFPHRGLFVARAGLTSNHAVLWFDVRSDVALDGRSVGGRGDFTFAVNGRTWVKSFGTQSRERSILHIDGLAQEAIAPPAEIRHVDSEGANTVMVADLTYSYNVQWARGRKPQTRYNIVYDDLRMTSSRVAMRFLEEEVNLPPYNISVPAGVENRIWKRQLRKEAVRKVVRSVCVLQGSRNGTQSTSRGSSTGSLIISDFVDAGKGTHRIESYLALSKGTLVKNMSCSRNPSDPQCSVTLTDQKKKTNVVIHVHANVLLRVRREEVSNRTRIVVSCISRAPVRFWMAIAVAGVHALKMDLTKDGLFVTHGRDIDFLHATQDGGVRRPQAQEAQMLVTGKIVRLHPSLMTPVLQGKQTFEANFVLRAQSDHEKEDLISTCHHGTTVRTRINVFACDLGDCEEVHGLHHPCSPASGREEWSGNLQNGNTYHVKIAVESIEGLRSVVEVEHKVR 983          
BLAST of Gcaud1945.t1 vs. uniprot
Match: A0A2V3ILR0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILR0_9FLOR)

HSP 1 Score: 440 bits (1132), Expect = 2.950e-137
Identity = 268/774 (34.63%), Postives = 402/774 (51.94%), Query Frame = 0
Query:  103 GRRHWNDLLEHHAESRRHGNEGTWSTYFERQTVWQGYLSEVIAYLAELEKKGLTSVYDGR--PMSTGTG-----FETYRNSLRNLASTIEVMNSTLTPSLLFCAFWTGLSGKINQDFLPVYNTETCVKATVAWSKVLLAHRIYHCSPRCPFTVDDRSRSFLWNTRIPWKMRNDDYTAGFSLALAYDVLYDKMSIAEQRTVRSALAMLVMNRFSWGTCPVSSQHCPDVFTEPHKIVDANAMYHSNLFLTNLAIEGESDFDAYTIGVLRTHDADGFNSDFNFRFLSLLRAYMHHAVYPDGSTVQGSSFYTNGLREGSLALLAAQRRGLNLLDTPRFRNVVHYSSQIMEPWECGKLPGEAPEAI--HNTFIALFNFLFPESEVISIMWRQRIGRLMPRSCSRLEW--RSVTQLLFLAREPVPYKHNYV----TLPASTYKYFPLKVYFAQRGLLVARTGLGNPYAYLQFDTRRDVVLDGRDSGGHGDLLFAVGGHTWLQSFG-DH---SREKSLLHIDGVAQENIAPPVKLIRIESEKGILIAVADLTYSYNIQWARG-RGAQVRYNTVYD-RKTTTAHRMAVSFSQRETQLPLS----------NISIPTNL-----------GERLWRRKTRAEQAQRVTRSVCLLDGRTSDLDPTEGALSGVLIISDYVNPGRGSHLIESYFALSNGTRVINLSCSQNPYEPQCALTLLSPKKTKAVLHVL---SSAPLRARTEDGDARLRIIVSADVRKPTRIWTGIAADDLPALKVRLLKEG 831
            G+  W +LL+ HA      +  +WS    + T   G  SE+I  LA LE+ G T+++D R  P  +G+      +  YR++++ LA  +++M    + SL  CAFW  +S K +  FL    T+ C+ A VAW+KVL+AHR +HC+P C     D  +S+LWN    W++ ND YTAGF+LALAYDVLY +MS A++  VRSALA+LVM R++WG    ++   P+  T PH+IV    MYHSNL+LTNLAIEGE+ F  Y   +L   +A GFN+  N +F +L+ AYM H+VYPDGS+ +    Y    REGSL  LAA RRG NLL TPRFRN++H  +Q+ EPW+C  L G +      +  F+ LF + +P+  +  ++W QR G+      +   W  +++TQ++    E      +      TLP +  K+FPL     +RGL++AR+      +Y+ FD R D    G D+   G + F+     WL     +H   SR+ SL+HIDG+AQ   AP V +++        IA ADLTY+YN+QWA+  +G  +    V + R+  + ++   +F+  E   P            +I    N+           G   W+R  R +      RS+ +     SD D       G  ++ D V+ G G H  ESY  L +   +   S S +  + +C + + SP      +HVL   + A  R    DG  RL  IV +       +W  +   +    +  +++EG
Sbjct:    2 GQTEWQNLLKRHANPHTFDSNISWSHSLRKLTFQHGPESELILKLAALEQNGHTALFDARIPPPPSGSAEQRRQYNAYRSAIKPLADHLKLMKEVHSHSLFLCAFWAQVSEKQSNPFLSTNTTQMCINAAVAWAKVLMAHRTFHCNPNCTTPKYDTEKSYLWNVDSIWEVSNDWYTAGFTLALAYDVLYQRMSSAQRTVVRSALALLVMKRWTWGVVDETTPSNPNAETHPHRIVSNWGMYHSNLYLTNLAIEGETGFVPYAQHILSQSNAVGFNAKLNRKFEALINAYMTHSVYPDGSSFEDGYTYHTAFREGSLGFLAAHRRGHNLLATPRFRNIIHNVAQMFEPWQCAPLVGHSSGGGLGYPAFVGLFRYAYPDGVLPQMVWAQRFGKRFANDANCRTWWIQTMTQMVVFGDEHQQNLDDVADAPETLPPAAKKHFPLAYVSTRRGLIIARSSYSQMSSYMHFDARPDSFYLGHDNADRGAITFSALKRRWLDDLPWEHNFDSRKHSLMHIDGLAQAVKAPSVTILKAVDTLSSTIASADLTYTYNVQWAQAWQGPSIGTGDVLEYRQDGSTYKKMYTFADPEEHSPWDLGWPMEDDAVDIGFERNMTMKGYPHLAAFGMNEWKRHYREKHLDYFIRSIVMA---RSDKDRV-----GYGVLVDSVSAGPGKHTFESYLILQDDVDLEKASSSCD--QSRCKIVVSSPAGESLEVHVLVLGNKASFRIERFDGHKRL--IVKSVREVSEEVWIALYPRNRDPGRFEMVREG 763          
BLAST of Gcaud1945.t1 vs. uniprot
Match: A0A2V3J5A4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A4_9FLOR)

HSP 1 Score: 382 bits (982), Expect = 5.110e-112
Identity = 265/805 (32.92%), Postives = 391/805 (48.57%), Query Frame = 0
Query:   65 VPQFSDSKPAASQLFGKFRSFVAHPSELRPHVHPRVVFGRRHWNDLLEHHAESRRHGNEGTWSTYFERQTVWQGYLSEVIAYLAELEKKGLTSVYDGRPMSTGTGFETYRNSLRNLASTIEVMNSTLTPSLLFCAFWTGLSGKI------NQDFLPVYNTETCVKATVAWSKVLLAHRIYHCSPRCPFTVDDRSRSFLWNTRIPWKMRNDDYTAGFSLALAYDVLYDKMSIAEQRTVRSALAMLVMNRFSWGTCPVSSQHCPDVFTEPHKIVDANAMYHSNLFLTNLAIEGESDFDAYTIGVLRTHDADGFNSDFNFRFLSLLRAYMHHAVYPDGSTVQGSSFYTNGLREGSLALLAAQRRGLNLLDTPRFRNVVHYSSQIMEPWECGKLPGEAPEA--IHNTFIALFNFLFPESEVISIMWRQRIGR-LMPRSCSRLEW-RSVTQLLFLAREPVPYKHNYVTLPAST------YKYFPLKVYFAQRGLLVARTGLGNPYAYLQFDTRRDVVLDGRDSGGHGDLLFAVGGHTWLQSFGDH-------SREKSLLHIDGVAQENIAPPVKLIRIESEKGILIAVADLTYSYNIQWAR---GRGAQVRYNTVYDRKTTTAHRMAVSFSQRETQLPLSNISIPTNLGERL----------------------WRRKTRAEQAQRVTRSVCLLDGRTSDLDPTEGALSGVLIISDYVNPGRGSHLI---ESYFALSN--GTRVINLSCSQNPYEPQCALTLLSPKKTKAVLHVLSSAP-LRARTEDGDAR---LRIIVSADVRKPTRIW 812
            V  F  S P  S LFG      A  ++L P VHPR++F    W +L+  + +   +    +WS +    +   G  SE +  LAE+E+ G T+ Y G         +T R  L  +ASTI         S   CA WT +          +  F P    E C+ ATVAW+KVLL+HR  +C+  CP T     R+ LW T+  +++ +D Y A F +AL  DV YD+ +  ++R VRSA+A+ V  + SWG+   S ++ P+    PH+I    AMYHS L+L NL +EGE+D+DAY   VL   +  GFN   N RF SL+ AYM+H++YPDGST +    Y   LREG L LLAA RRGLN+ DT RFR ++H ++Q++EPW CG++ G +     ++  + +LF +++ +  +  ++WR R+G      +  R++W + +T +     E     H   T  +S        K+FPL  Y  +RGLL+AR+       Y+ FD R D    G D+   G   +     TW+    DH       SR+ SLLHIDG+AQ+  AP V++I+ +     +IA ADLTY+YN QWAR   G     +Y  VY    T    +   F+  E   P+       + GE L                      WR+  R      V RSV L  G  S  + + G      I++D      G+ +I   ESY  L+   G  V N  C  N     C + L +    +  L V+S    L   TE   +     R+++ +++ +  +IW
Sbjct:   43 VQAFLSSAPHPS-LFGNVSVTPAPAADLEPGVHPRILFDIEGWFELIGRYVDRNTYDLPSSWSRHIRVLSATYGPDSEFLISLAEMERSGDTAAYTGEENLVAIT-DTQRERLEPIASTILNSTEGTYQSFFLCALWTTVQEIAVAERGPSASFTP-RTPEDCILATVAWAKVLLSHRAVNCAGDCP-TESSGERAHLWLTQRRFEVSDDWYAASFPMALTLDVFYDRFTATQRRIVRSAIALFVHKKASWGSTITSDKYSPNADLHPHRIFSNWAMYHSYLYLANLVLEGETDYDAYASAVLTESEESGFNVGLNQRFTSLISAYMNHSIYPDGSTFEDGYTYFIALREGGLGLLAAHRRGLNIFDTDRFRGLIHNAAQMLEPWHCGRIIGHSSGGGVLYPAWTSLFRYVYRDGPLPQMIWRHRMGDDFKNNNPCRIQWFQDMTPMTIFGGE-----HGNATRASSPAGLGEYLKHFPLSYYSPRRGLLIARSSESENALYIHFDARPDSFFPGHDNADRGGFTYTAYRSTWID---DHWWKANLDSRKHSLLHIDGLAQDEKAPSVRMIKRDDNGDEVIAAADLTYAYNFQWARNWPGESPLRQYVNVYHADGTLVRELEW-FTDAEYGHPIDFGWPSDDDGEDLGFTRAQFNTHGDPDVGFKGMWTWRKPYRMTPLSWVVRSVILNRGNHSANEDSPG----YFIVADSARVS-GTPMINSFESYLILAEDVGVDVENSWCEGN----WCRIVLKNGGSAETDLQVVSRGERLSFHTEQYMSEKLYTRLVIRSEMEQEEQIW 825          
The following BLAST results are available for this feature:
BLAST of Gcaud1945.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3ILQ5_9FLOR0.000e+053.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILR0_9FLOR2.950e-13734.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5A4_9FLOR5.110e-11232.92Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008929Chondroitin AC/alginate lyaseGENE3D1.50.10.100Chondroitin AC/alginate lyasecoord: 237..464
e-value: 2.6E-12
score: 48.8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..984
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_804_length_17738_cov_4.544908contigNODE_804_length_17738_cov_4.544908:4684..7638 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1945.t1Gcaud1945.t1Gracilaria caudata M_176_S67 malemRNANODE_804_length_17738_cov_4.544908 4684..7638 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1945.t1 ID=Gcaud1945.t1|Name=Gcaud1945.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=985bp
MPHIKLSFAFGFCLCFLASVSSLPLAHVCRESDLTRAYYNKQAEQQRYEA
LLQRDVLAQFQNLSVPQFSDSKPAASQLFGKFRSFVAHPSELRPHVHPRV
VFGRRHWNDLLEHHAESRRHGNEGTWSTYFERQTVWQGYLSEVIAYLAEL
EKKGLTSVYDGRPMSTGTGFETYRNSLRNLASTIEVMNSTLTPSLLFCAF
WTGLSGKINQDFLPVYNTETCVKATVAWSKVLLAHRIYHCSPRCPFTVDD
RSRSFLWNTRIPWKMRNDDYTAGFSLALAYDVLYDKMSIAEQRTVRSALA
MLVMNRFSWGTCPVSSQHCPDVFTEPHKIVDANAMYHSNLFLTNLAIEGE
SDFDAYTIGVLRTHDADGFNSDFNFRFLSLLRAYMHHAVYPDGSTVQGSS
FYTNGLREGSLALLAAQRRGLNLLDTPRFRNVVHYSSQIMEPWECGKLPG
EAPEAIHNTFIALFNFLFPESEVISIMWRQRIGRLMPRSCSRLEWRSVTQ
LLFLAREPVPYKHNYVTLPASTYKYFPLKVYFAQRGLLVARTGLGNPYAY
LQFDTRRDVVLDGRDSGGHGDLLFAVGGHTWLQSFGDHSREKSLLHIDGV
AQENIAPPVKLIRIESEKGILIAVADLTYSYNIQWARGRGAQVRYNTVYD
RKTTTAHRMAVSFSQRETQLPLSNISIPTNLGERLWRRKTRAEQAQRVTR
SVCLLDGRTSDLDPTEGALSGVLIISDYVNPGRGSHLIESYFALSNGTRV
INLSCSQNPYEPQCALTLLSPKKTKAVLHVLSSAPLRARTEDGDARLRII
VSADVRKPTRIWTGIAADDLPALKVRLLKEGLIVGHGKTFKFLHASHDGG
IDYAREKWSGTLRNGDFVVLNATSMKPVLNGPQTFEASLNVSAESRSGMD
DVISTCGHRTSVRTRIQVFLCESSVCKEVPGFRRPCSKASGRLEWRGQLV
QGSVYNIRITVESVVGLQSSVEVRYRLRRHNFSH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008929Chondroitin_lyas