Gcaud1937.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1937.t1
Unique NameGcaud1937.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length304
Homology
[Close]
BLAST of Gcaud1937.t1 vs. uniprot
Match: A0A2V3IPX4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPX4_9FLOR)

HSP 1 Score: 382 bits (981), Expect = 1.310e-130
Identity = 191/298 (64.09%), Postives = 236/298 (79.19%), Query Frame = 0 
Query:    1 MGEENETISTTLLFCPLVLM-GEDDGEQDIRINEQDAGKASDLFVYKGRLTTLPGEQDPIRPASLSSKSAKHFFCPVCDHRVKVTAERIYCNSCGWNATEAGIHSVAQLLQSEAEPYPMLSDSFEELVRTVRGEHQIEDSNNNKDSPSAAYAPLFGNVRLQDLTERRMQKGRLFRRKEPARRRLATCGVEILQGNAVSAEKVLPKLQVDLCGAEAIVQLQNSRLEDVSVLVCAAGEDDGQALTLGADVIGEARVQIPDEAVSVERDGGVVELDLWFCFESGEYASNQFGVRVFARFKK 297
            M +E  +I TTLLF PLVL+ G++D EQ+  I EQDAG+ SDL+VY GRLTTL  E +PI   S S+KSAK FFCPVCD  +KVTA+ IYC  C WNAT+AGIHSVA+LLQ EA+PYP+L++ F++LV+  RGE + E +  + + P + Y PLF +VR+ +LT++R+Q GRLF++ EP RRRL +  VE+L G AVSAE VLPKLQVD+CGA+AIVQ+ N R EDVSVLVCAAGEDDGQALTLG +VIGEAR+ +  EA+  ERDGGVVELD WFC+ESGE+ASNQFGVRVFARF K
Sbjct:    1 MSDEQVSIPTTLLFRPLVLLDGDEDCEQESTIAEQDAGRPSDLYVYNGRLTTLANEAEPIHLVSRSAKSAKQFFCPVCDAVIKVTAKDIYCGKCQWNATQAGIHSVAELLQREADPYPILTERFQQLVKIARGEVEAECAITDGEEPDSGYDPLFSDVRIDELTDKRVQVGRLFKKGEPPRRRLVSPAVEVLDGEAVSAELVLPKLQVDICGADAIVQMHNVRDEDVSVLVCAAGEDDGQALTLGTEVIGEARLHVAQEAIMYERDGGVVELDFWFCYESGEFASNQFGVRVFARFTK 298
The following BLAST results are available for this feature:
BLAST of Gcaud1937.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IPX4_9FLOR1.310e-13064.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_105_length_50300_cov_4.471768contigNODE_105_length_50300_cov_4.471768:39513..40424 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1937.t1Gcaud1937.t1Gracilaria caudata M_176_S67 malemRNANODE_105_length_50300_cov_4.471768 39513..40424 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1937.t1 ID=Gcaud1937.t1|Name=Gcaud1937.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=304bp
MGEENETISTTLLFCPLVLMGEDDGEQDIRINEQDAGKASDLFVYKGRLT
TLPGEQDPIRPASLSSKSAKHFFCPVCDHRVKVTAERIYCNSCGWNATEA
GIHSVAQLLQSEAEPYPMLSDSFEELVRTVRGEHQIEDSNNNKDSPSAAY
APLFGNVRLQDLTERRMQKGRLFRRKEPARRRLATCGVEILQGNAVSAEK
VLPKLQVDLCGAEAIVQLQNSRLEDVSVLVCAAGEDDGQALTLGADVIGE
ARVQIPDEAVSVERDGGVVELDLWFCFESGEYASNQFGVRVFARFKKFGG
IKL*
back to top