Gcaud1913.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1913.t1
Unique NameGcaud1913.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length454
Homology
BLAST of Gcaud1913.t1 vs. uniprot
Match: A0A2V3J4Q5_9FLOR (Two-component response regulator-like PRR37 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4Q5_9FLOR)

HSP 1 Score: 429 bits (1102), Expect = 3.050e-144
Identity = 265/459 (57.73%), Postives = 315/459 (68.63%), Query Frame = 0
Query:    1 MEFLQSPDLARGHWSAATPTRALRTTLTPAVPGASPTPLHSAAXXXXXXXXXXXXXXXXXXXXATPKGPFSATPFMSQLDRAGIKSSFQSLFSPHPES-AFATPALLSRKPASGLTPFLNATTTPGLVPPSPSLLPSFSPGPAQNAVLPSPNASDPMQRTPFLAAAAREAVRREFMNMPSYVAPGPSPHHHSSADAERKDPEKDNSPQYTMQVVANTGAQVESTPPRKNNTEPSHTESTHPSAGPSASSSPSDAKVPDHHDRNSANTKNKSPEQSSTDQRAPAQKNGQHPPQ------PQMHPFFIPHAQPPPGMMVLGQHAPMMMAPPPGMFXXXXXXXXXXGQPXXXXXXXXXXXXQTLVPPRVVPAKQESPSERKARVENEKQELIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARPRVKGRFVRLKTTDDDDESESAQVVPNLET 452
            MEFLQ+PDL    WS+   +R L+T +TPA+PGASPT                          ATPKG FS+TPF++QLDR GIK+SFQSLFSP P S   ATPALLSR  A GLTPFLNAT TPGLVPP  +LLP+FS  P Q  V  SPN S+  Q+TP+L AAA+EAVRREFM+MPSYVA  P P     A  ER+ PEK  SP+Y++QVV  TGAQV ++ P+ + T+ +   +       +  SSPSDAKVPD+  +   + + KS  Q S ++      + Q P Q      PQMHP+FIP  QP PGM++ GQHAP+MMAPPPGMF   X      GQP     XXXXX  Q+++P RVVP K E+P ERKARVENEKQ+LIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARPRVKGRFVR+K  ++DDESE AQVVPN++T
Sbjct:    1 MEFLQTPDLGGNTWSSNVSSRGLQTGVTPAIPGASPTFPQPGPGASSAGLPSLTPATLNSFPNATPKGLFSSTPFINQLDRTGIKNSFQSLFSPSPGSNVAATPALLSRTTAPGLTPFLNATQTPGLVPPCSALLPTFSSFPLQKGVSASPNVSEQGQKTPYLTAAAKEAVRREFMSMPSYVATLPPPEARPQASTERQVPEKVASPKYSVQVVVQTGAQVPASGPQSSTTQLTQQRNEPHEGSLTGPSSPSDAKVPDNSPKGLVHKETKSSCQESGEKTTSTHPDSQQPHQQTHAIPPQMHPYFIPQTQPVPGMVMFGQHAPVMMAPPPGMFPHPXMVMFPGGQPMVPPHXXXXXPPQSVMPQRVVPPKSETPEERKARVENEKQDLIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARPRVKGRFVRMKN-ENDDESEPAQVVPNMQT 458          
BLAST of Gcaud1913.t1 vs. uniprot
Match: R7Q836_CHOCR (CCT domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q836_CHOCR)

HSP 1 Score: 129 bits (323), Expect = 1.020e-30
Identity = 85/147 (57.82%), Postives = 94/147 (63.95%), Query Frame = 0
Query:  307 GMMVLGQHAPMMMAPPPGMFXXXXXXXXXXG--QPXXXXXXXXXXXXQTLVPPRVV-PAKQESPSERKARVENEKQELIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARPRVKGRFVRLKTTDDDDESESAQVVPNL 450
            GM ++GQH  MMM   PG            G   P               +  R   P K E+  ERK R+E+EKQELIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARPRVKGRFVR+K   DD++ E  QVVP L
Sbjct:  117 GMFMIGQHPQMMMPSAPGPMYAPQGMVMFAGPQHPGFPQGMVMPPAHAAHMQHRPQGPVKPETQVERKDRIEHEKQELIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARPRVKGRFVRIK---DDEDMEQPQVVPGL 260          
BLAST of Gcaud1913.t1 vs. uniprot
Match: R7QMZ2_CHOCR (CCT domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMZ2_CHOCR)

HSP 1 Score: 95.9 bits (237), Expect = 1.470e-20
Identity = 58/90 (64.44%), Postives = 67/90 (74.44%), Query Frame = 0
Query:  361 PAKQESPSERKARVENEKQELIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARPRVKGRFVRLKTTDDDDESESAQVVPNL 450
            P + E+ + RK R+E+EKQE IREFKKKTREAALVRF QK R RRFG +IRYDCRKKLADA PRVKGR        D+D+ E  QVVP +
Sbjct:    8 PVQPETQAHRKLRIEHEKQEPIREFKKKTREAALVRFWQKHRGRRFGTVIRYDCRKKLADAWPRVKGRIK------DEDDMEPPQVVPGM 91          
BLAST of Gcaud1913.t1 vs. uniprot
Match: R7QLM1_CHOCR (CCT domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLM1_CHOCR)

HSP 1 Score: 95.9 bits (237), Expect = 6.630e-20
Identity = 70/138 (50.72%), Postives = 80/138 (57.97%), Query Frame = 0
Query:  289 PPQPQMHPFFIPHAQPPPGMMVLGQHAPMMMAPPPGMFXXXXXXXXXXG--QPXXXXXXXXXXXXQTLVPPRVV-PAKQESPSERKARVENEKQELIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARP 423
            PP   + P   PH Q   GM + GQH  +M+ P P             G   P               +  R   P K E+ +ERK R+E+EKQE+IREFKKKTREAALVRFRQKRRERRFGKLIRY CRKKLADARP
Sbjct:   10 PPGSALLPHIAPH-QHLHGMFMTGQHPQVMIPPAPSPMYAPQGMVLFAGAQHPAYPQGMLMPSAHAAQMQHRSKGPVKPETQAERKDRIEHEKQEVIREFKKKTREAALVRFRQKRRERRFGKLIRYYCRKKLADARP 146          
BLAST of Gcaud1913.t1 vs. uniprot
Match: R7QJ51_CHOCR (CCT domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ51_CHOCR)

HSP 1 Score: 94.7 bits (234), Expect = 1.030e-19
Identity = 58/88 (65.91%), Postives = 66/88 (75.00%), Query Frame = 0
Query:  361 PAKQESPSERKARVENEKQELIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARPRVKGRFVRLKTTDDDDESESAQVVP 448
            P + E+ + RK R+E+EKQE IREFKKKTREAALVRF  K R RRFG LIRYDCRKKLADA+PRVKGR        D+D+ E  QVVP
Sbjct:   31 PVQPETQAHRKLRIEHEKQEPIREFKKKTREAALVRFWLKHRGRRFGTLIRYDCRKKLADAQPRVKGRIK------DEDDMEPPQVVP 112          
BLAST of Gcaud1913.t1 vs. uniprot
Match: A0A7S0ZF80_9RHOD (Hypothetical protein n=2 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZF80_9RHOD)

HSP 1 Score: 90.9 bits (224), Expect = 1.800e-16
Identity = 48/63 (76.19%), Postives = 56/63 (88.89%), Query Frame = 0
Query:  369 ERKARVENEKQELIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARPRVKGRFVR 431
            +R+ R   EK++LIREFK+KTREAAL+RFRQKRRER FGK IRYDCRKKLAD RPRV+GRFV+
Sbjct:  252 DRRLREAREKEDLIREFKRKTREAALIRFRQKRRERNFGKNIRYDCRKKLADRRPRVRGRFVK 314          
BLAST of Gcaud1913.t1 vs. uniprot
Match: A0A1X6P1X4_PORUM (CCT domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P1X4_PORUM)

HSP 1 Score: 90.9 bits (224), Expect = 5.940e-16
Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 0
Query:  360 VPAKQESPSERKARVENEKQELIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARPRVKGRFVRL 432
            +PAK E+  ERK R E+EK+ L REFKKKTREAAL+RFRQKRR+R+FGKL+RY  RK LAD RPRVKGRFV++
Sbjct:  379 LPAK-ETQEERKNREESEKETLTREFKKKTREAALLRFRQKRRDRKFGKLVRYTVRKALADGRPRVKGRFVKM 450          
BLAST of Gcaud1913.t1 vs. uniprot
Match: M1VFH2_CYAM1 (CCT domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VFH2_CYAM1)

HSP 1 Score: 73.9 bits (180), Expect = 2.010e-10
Identity = 38/59 (64.41%), Postives = 51/59 (86.44%), Query Frame = 0
Query:  373 RVENEKQELIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARPRVKGRFVR 431
            R E EK   +REFK+KTR+AA++R+RQK+RERRF K++RY CRK LAD+RPR++GRFV+
Sbjct:  500 RKEIEKLFSVREFKQKTRQAAIIRYRQKKRERRFIKIVRYSCRKILADSRPRIRGRFVK 558          
BLAST of Gcaud1913.t1 vs. uniprot
Match: A0A7J7IG18_9RHOD (CCT domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IG18_9RHOD)

HSP 1 Score: 70.5 bits (171), Expect = 2.580e-9
Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 0
Query:  357 PRVVPAKQESPSERKARVENEKQELIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARPRVKGRFVR 431
            PR+ P   E+      R E EK    REFK+ TR+AA+VR+RQK++ERRF K++RY CRK LAD RPR++GRFVR
Sbjct:  489 PRLTPGMPEA-----TRKEIEKLLSQREFKQMTRQAAIVRYRQKKKERRFMKVVRYSCRKVLADKRPRIRGRFVR 558          
BLAST of Gcaud1913.t1 vs. uniprot
Match: A0A6T6C3Z9_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6C3Z9_9RHOD)

HSP 1 Score: 68.2 bits (165), Expect = 6.680e-9
Identity = 45/90 (50.00%), Postives = 53/90 (58.89%), Query Frame = 0
Query:  361 PAKQESPSERKARVENEKQELIREFKKKTREAALVRFRQKRRERRFGKLIRYDCRKKLADARPRVKGRFVRLKTTDDDDESESAQVVPNL 450
            PA   S  ++K R + EK+ L+RE KKK              ER+ GKLIRYDCRKKLADARPRVKGRFVR       D+    QVVP +
Sbjct:  247 PAAMTSAGDKKEREKREKEALVRELKKKXXXXXXXXXXXXXXERKLGKLIRYDCRKKLADARPRVKGRFVRA------DDPLEIQVVPEV 330          
The following BLAST results are available for this feature:
BLAST of Gcaud1913.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2V3J4Q5_9FLOR3.050e-14457.73Two-component response regulator-like PRR37 n=1 Ta... [more]
R7Q836_CHOCR1.020e-3057.82CCT domain-containing protein n=1 Tax=Chondrus cri... [more]
R7QMZ2_CHOCR1.470e-2064.44CCT domain-containing protein n=1 Tax=Chondrus cri... [more]
R7QLM1_CHOCR6.630e-2050.72CCT domain-containing protein n=1 Tax=Chondrus cri... [more]
R7QJ51_CHOCR1.030e-1965.91CCT domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A7S0ZF80_9RHOD1.800e-1676.19Hypothetical protein n=2 Tax=Timspurckia oligopyre... [more]
A0A1X6P1X4_PORUM5.940e-1671.23CCT domain-containing protein n=1 Tax=Porphyra umb... [more]
M1VFH2_CYAM12.010e-1064.41CCT domain-containing protein n=1 Tax=Cyanidioschy... [more]
A0A7J7IG18_9RHOD2.580e-956.00CCT domain-containing protein n=1 Tax=Cyanidiococc... [more]
A0A6T6C3Z9_9RHOD6.680e-950.00Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 371..391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..290
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 431..453
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..153
NoneNo IPR availablePANTHERPTHR31717ZINC FINGER PROTEIN CONSTANS-LIKE 10coord: 203..440
IPR010402CCT domainPFAMPF06203CCTcoord: 390..431
e-value: 3.0E-16
score: 59.2
IPR010402CCT domainPROSITEPS51017CCTcoord: 390..432
score: 15.497208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_927_length_16063_cov_4.587278contigNODE_927_length_16063_cov_4.587278:12341..13702 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1913.t1Gcaud1913.t1Gracilaria caudata M_176_S67 malemRNANODE_927_length_16063_cov_4.587278 12341..13702 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1913.t1 ID=Gcaud1913.t1|Name=Gcaud1913.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=454bp
MEFLQSPDLARGHWSAATPTRALRTTLTPAVPGASPTPLHSAAVATSSAP
PALTPAALGAAPDATPKGPFSATPFMSQLDRAGIKSSFQSLFSPHPESAF
ATPALLSRKPASGLTPFLNATTTPGLVPPSPSLLPSFSPGPAQNAVLPSP
NASDPMQRTPFLAAAAREAVRREFMNMPSYVAPGPSPHHHSSADAERKDP
EKDNSPQYTMQVVANTGAQVESTPPRKNNTEPSHTESTHPSAGPSASSSP
SDAKVPDHHDRNSANTKNKSPEQSSTDQRAPAQKNGQHPPQPQMHPFFIP
HAQPPPGMMVLGQHAPMMMAPPPGMFPPPGMMVFPGGQPMMPQPGMMMHP
PQTLVPPRVVPAKQESPSERKARVENEKQELIREFKKKTREAALVRFRQK
RRERRFGKLIRYDCRKKLADARPRVKGRFVRLKTTDDDDESESAQVVPNL
ETR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain