Gcaud1889.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1889.t1
Unique NameGcaud1889.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length203
Homology
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BLAST of Gcaud1889.t1 vs. uniprot
Match: A0A2V3J315_9FLOR (Coiled-coil domain-containing protein 6 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J315_9FLOR)

HSP 1 Score: 179 bits (454), Expect = 1.100e-53
Identity = 167/191 (87.43%), Postives = 174/191 (91.10%), Query Frame = 0 
Query:   12 QLQIRELRRELSSLKLELAREKHRRQAAEEHVLALRRESTLNQIRIEEEEEMISNKLMKRLSELKQEKEQIARASESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELERKVQRLSRSTTPGALTPTSSPALSLRSADGSLSRNGSYRLSAPASLPHAALPHSSNPPQPQ 202
            Q QIR+LRR+LSSLKL+LAREK RRQAAEEHV  +RRESTLNQIRIEEEEEMISNKLMKRLSELKQEKEQIARASE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EL+RKVQRLSRSTTPGALTPTSSPALSLRSADGSLSRNGSYRLS+ A  P A L   S+  Q Q
Sbjct:   14 QSQIRDLRRQLSSLKLDLAREKQRRQAAEEHVREVRRESTLNQIRIEEEEEMISNKLMKRLSELKQEKEQIARASEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQELQRKVQRLSRSTTPGALTPTSSPALSLRSADGSLSRNGSYRLSSAAPFPSAPLHQPSSASQSQ 204
The following BLAST results are available for this feature:
BLAST of Gcaud1889.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J315_9FLOR1.100e-5387.43Coiled-coil domain-containing protein 6 n=1 Tax=Gr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 123..150
NoneNo IPR availableCOILSCoilCoilcoord: 58..85
NoneNo IPR availableCOILSCoilCoilcoord: 94..121
NoneNo IPR availableCOILSCoilCoilcoord: 15..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 147..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..202
IPR019152Protein of unknown function DUF2046PFAMPF09755DUF2046coord: 12..150
e-value: 9.1E-20
score: 71.0
IPR019152Protein of unknown function DUF2046PANTHERPTHR15276H4 D10S170 PROTEIN-RELATEDcoord: 12..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1484_length_10307_cov_4.493148contigNODE_1484_length_10307_cov_4.493148:400..1008 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1889.t1Gcaud1889.t1Gracilaria caudata M_176_S67 malemRNANODE_1484_length_10307_cov_4.493148 400..1008 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1889.t1 ID=Gcaud1889.t1|Name=Gcaud1889.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=203bp
MSEEGAADGAAQLQIRELRRELSSLKLELAREKHRRQAAEEHVLALRRES
TLNQIRIEEEEEMISNKLMKRLSELKQEKEQIARASESDSEWVTNSLSQR
LEELQRQKHRIIAAAEEENEYIVNRLNKELDALRSEKHELERKVQRLSRS
TTPGALTPTSSPALSLRSADGSLSRNGSYRLSAPASLPHAALPHSSNPPQ
PQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019152DUF2046