Gcaud1864.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1864.t1
Unique NameGcaud1864.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length291
Homology
BLAST of Gcaud1864.t1 vs. uniprot
Match: A0A2V3II36_9FLOR (Diaminopimelate epimerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II36_9FLOR)

HSP 1 Score: 471 bits (1211), Expect = 1.520e-165
Identity = 221/259 (85.33%), Postives = 240/259 (92.66%), Query Frame = 0
Query:    1 MTAFRKYHGLGNDFVLIDNRHSSAPVLTPTEAEAVCNRNTGVGADGVIFLLPPTKTTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVHGRTTGKYVVDTGAGEIVPQMESGSEKVKVDMGAPILEPEHVPTMLNTSAANEYQDILKGLAGRDWTFSCVSMGNPHAITFVAKDVYDDMDSRLEAVGPSFENHPVFPQRTNTEFVYQHSKTDFDMLVWERGSGRTMACGTGACAVLVAAVLTGRAEKDVPTVIHLPG 259
            MTAFRKYHGLGNDFVLIDNRH +APVLTP EAE VCNRNTGVGADGVIFLLPP+  +SDFGMRLYNSDGTEPEMCGNGIRCLARFAADLG+HG+T GKYVVDTGAGEIVP+ME GSE+V+VDMG PILEP++VPT LNT+ AN YQD+LKG+AGRDWTF CVSMGNPHAITFV K  YDDMDSRLEAVGP FENH VFPQRTNTEFV++ SKT+FDMLVWERG+GRTMACGTGACAVLVAAVLTGRA+KDVP +IHLPG
Sbjct:   60 MTAFRKYHGLGNDFVLIDNRHDAAPVLTPVEAEKVCNRNTGVGADGVIFLLPPSNPSSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGLHGKTPGKYVVDTGAGEIVPEMEPGSEEVRVDMGTPILEPQNVPTKLNTTEANGYQDVLKGVAGRDWTFVCVSMGNPHAITFVTKKEYDDMDSRLEAVGPDFENHSVFPQRTNTEFVFERSKTEFDMLVWERGAGRTMACGTGACAVLVAAVLTGRADKDVPVIIHLPG 318          
BLAST of Gcaud1864.t1 vs. uniprot
Match: R7QGK7_CHOCR (Diaminopimelate epimerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGK7_CHOCR)

HSP 1 Score: 432 bits (1111), Expect = 3.730e-150
Identity = 200/290 (68.97%), Postives = 246/290 (84.83%), Query Frame = 0
Query:    1 MTAFRKYHGLGNDFVLIDNRHSSAPVLTPTEAEAVCNRNTGVGADGVIFLLPPTKTTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVHGRTTGKYVVDTGAGEIVPQMESGSEKVKVDMGAPILEPEHVPTMLNTSAANEYQDILKGLAGRDWTFSCVSMGNPHAITFVAKDVYDDMDSRLEAVGPSFENHPVFPQRTNTEFVYQHSKTDFDMLVWERGSGRTMACGTGACAVLVAAVLTGRAEKDVPTVIHLPGGDLTIEWESSSNHVLMTGPAELVFEGKLPNM 290
            MTAFRKYHG+GNDFV++DNR    P+ TP ++ A+C+RNTGVGADGVIFLLPP + +SDF MRLYNSDGTEPEMCGNGIRCLA+FA DL +   + G++V+DTGAG I+P++E GS +VKVDMG P++ P  VPT L+TS +  Y+ +L  + G DWTFSCVSMGNPHAI+FV+K+V+ +MD++LE VGPSFE +PVFPQ+TNTE+ +Q  +T+FDMLVWERG+GRTMACGTGACAVLVAAVLTGRA+KD PTVIHLPGGDLTIEW S +NH++MTGPAELVFEG  P +
Sbjct:   43 MTAFRKYHGIGNDFVVVDNRAQKNPLYTPDQSVAICDRNTGVGADGVIFLLPPKRRSSDFAMRLYNSDGTEPEMCGNGIRCLAKFADDLKIPTASPGRFVIDTGAGVIIPEIEQGSSEVKVDMGEPVIIPGEVPTTLDTSESAGYEAVLN-VDGTDWTFSCVSMGNPHAISFVSKEVFLEMDTKLEEVGPSFECNPVFPQKTNTEWAFQRCRTEFDMLVWERGAGRTMACGTGACAVLVAAVLTGRADKDQPTVIHLPGGDLTIEWVSKTNHIMMTGPAELVFEGHFPKV 331          
BLAST of Gcaud1864.t1 vs. uniprot
Match: A0A5J4Z3Z3_PORPP (Diaminopimelate epimerase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3Z3_PORPP)

HSP 1 Score: 307 bits (786), Expect = 7.400e-101
Identity = 158/286 (55.24%), Postives = 197/286 (68.88%), Query Frame = 0
Query:    4 FRKYHGLGNDFVLIDNRHSSAPVLTPTEAEAVCNRNTGVGADGVIFLLPPTKTTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVHGRTTGKYVVDTGAGEIVPQMESGSEKVKVDMGAPILEPEHVPTMLNTSAANEYQDILKGLA--GRDWTFSCVSMGNPHAITFVAKDVYDDMDSRLEAVGPSFENHPVFPQRTNTEFVYQHSKTDFDMLVWERGSGRTMACGTGACAVLVAAVLTGRAEKDVPTVIHLPGGDLTIEWESSSNHVLMTGPAELVFEGKL 287
            F KY GLGNDF+LIDNR +  P+LTP ++E +C+R+ GVG DGVIFLLPPT    D  MR+YNSDG+EPEMCGNGIRCLA+FAA+L  + + T  Y V T AG I P++      V VDMG P LE   VP +L   A       ++ L   GR +    VSMGNPH ITFV+K+ ++ +D+ LEA+GP +ENHP FP+R NTEF+Y+       MLVWERG+GRT+ACGTGACAV+VAAVL G A++    V  LPGG L IEW   +N V MTGP +LVF+G L
Sbjct:   47 FAKYQGLGNDFILIDNRTTETPLLTPEQSEKLCDRHFGVGGDGVIFLLPPTSDQVDCTMRIYNSDGSEPEMCGNGIRCLAKFAAELDENAKDT--YKVATLAGVITPRLTPDGS-VCVDMGEPELELAKVPAVLPDQAPGASSSHVRSLVVDGRMYEVLAVSMGNPHCITFVSKEEFEALDASLEAIGPKWENHPAFPKRVNTEFIYKERDDKLHMLVWERGAGRTLACGTGACAVVVAAVLAGVAQRKCEVV--LPGGPLLIEWREDNNRVYMTGPGDLVFKGVL 327          
BLAST of Gcaud1864.t1 vs. uniprot
Match: A0A6P5SSD2_PRUAV (Diaminopimelate epimerase n=7 Tax=Prunus TaxID=3754 RepID=A0A6P5SSD2_PRUAV)

HSP 1 Score: 306 bits (784), Expect = 4.770e-100
Identity = 162/293 (55.29%), Postives = 203/293 (69.28%), Query Frame = 0
Query:    4 FRKYHGLGNDFVLIDNRHSSAPVLTPTEAEAVCNRNTGVGADGVIFLLPPTKTTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADL-GVHGRTTGKYVVDTGAGEIVPQMESGSEKVKVDMGAPILEPEHVPTMLNTSAANEYQDILKG---LAGRDWTFSCVSMGNPHAITFVAKD----VYDDMDSRLEAVGPSFENHPVFPQRTNTEFVYQHSKTDFDMLVWERGSGRTMACGTGACAVLVAAVLTGRAEKDVPTVIHLPGGDLTIEWESSSNHVLMTGPAELVFEGKLP 288
            F KYHGLGNDF+L+DNR SS P +TP +A  +C+RN G+GADGVIF LP    T D+ MR+YNSDG+EPEMCGNG+RC ARF A+L  +HG+   ++ V TGAG IVP+++    KVKVDMG PIL+   VPT L    AN+ Q ++K    + G  W  +CVSMGNPH +TF  K       D+++  L  +GP FENH VFP RTNTEFV   + +   M VWERG+G T+ACGTGACAV+VAAVL GRAE++    + LPGG L IEW    NH+ MTGPAE+VF G +P
Sbjct:   81 FIKYHGLGNDFILVDNRDSSEPKVTPEQAAKLCDRNFGIGADGVIFALPGINGT-DYTMRIYNSDGSEPEMCGNGVRCFARFIAELENLHGKQ--RFTVHTGAGLIVPEIQDDG-KVKVDMGEPILKATDVPTGL---PANKNQSVVKSDLDVDGVTWNVTCVSMGNPHCVTFGTKGGQNLQVDELN--LAEIGPKFENHVVFPARTNTEFVQVFTPSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAERNC--TVDLPGGPLQIEWREEDNHIYMTGPAEVVFYGSVP 362          
BLAST of Gcaud1864.t1 vs. uniprot
Match: K9TDP4_9CYAN (Diaminopimelate epimerase n=2 Tax=Oscillatoriaceae TaxID=1892254 RepID=K9TDP4_9CYAN)

HSP 1 Score: 303 bits (776), Expect = 5.830e-100
Identity = 154/289 (53.29%), Postives = 198/289 (68.51%), Query Frame = 0
Query:    4 FRKYHGLGNDFVLIDNRHSSAPVLTPTEAEAVCNRNTGVGADGVIFLLPPTKTTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVHGRT----TGKYVVDTGAGEIVPQMESGSEKVKVDMGAPILEPEHVPTMLNTSAANEYQDILKGLAGRDWTFSCVSMGNPHAITFVAKDVYDDMDS-RLEAVGPSFENHPVFPQRTNTEFVYQHSKTDFDMLVWERGSGRTMACGTGACAVLVAAVLTGRAEKDVPTVIHLPGGDLTIEWESSSNHVLMTGPAELVFEGKL 287
            F KY GLGNDF+LIDNR +  P++TP++AE +C+RN G+GADGVIF LPPT+  +D+ MR+YNSD +EPEMCGNGIRCLARF  DLGV  R+    TG+Y + T AG +   ++S  + V+VDMG P L    +PT L      +  ++   +AG+ W  +CVSMGNPH ITFV     +D+D+  L  +GP FENHP FP+RTNTEF+    ++   M VWERG+G T+ACGTGACA LVA VLTGR ++     I LPGG L IEW  S   + MTGPAE VF G++
Sbjct:    5 FTKYQGLGNDFILIDNRQNPEPMITPSQAEQLCDRNFGIGADGVIFALPPTEPDTDYTMRIYNSDASEPEMCGNGIRCLARFLVDLGVPTRSSATGTGEYRIQTLAGVMTLTLKSDGQ-VRVDMGLPRLLSSEIPTTL-CPPEEKAVNVPLSVAGKTWDVTCVSMGNPHCITFV-----EDVDAVDLAGIGPQFENHPAFPKRTNTEFIQVMGRSHLKMRVWERGAGATLACGTGACATLVAGVLTGRCDRQA--TIELPGGPLHIEWSESDGRLYMTGPAERVFSGRI 284          
BLAST of Gcaud1864.t1 vs. uniprot
Match: A0A087SJN7_AUXPR (Diaminopimelate epimerase n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SJN7_AUXPR)

HSP 1 Score: 303 bits (777), Expect = 1.010e-99
Identity = 160/287 (55.75%), Postives = 198/287 (68.99%), Query Frame = 0
Query:    4 FRKYHGLGNDFVLIDNRHSSAPVLTPTEAEAVCNRNTGVGADGVIFLLPPTKTTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVHGRTTGKYVVDTGAGEIVPQMESGSEKVKVDMGAPILEPEHVPTMLN-TSAANEYQDILKGLAGRDWTFSCVSMGNPHAITFVAKD----VYDDMDSRLEAVGPSFENHPVFPQRTNTEFVYQHSKTDFDMLVWERGSGRTMACGTGACAVLVAAVLTGRAEKDVPTVIHLPGGDLTIEWESSSNHVLMTGPAELVFEG 285
            F KY GLGNDF+L+DNRHS+ P++TP++A   C+R+ GVGADGVIF LPP    SD+ MR+YNSDG+EPEMCGNGIRCLARF A+L        +Y VDT AG I P++  G  +V+VDMG PILE   +PT L  T+           + G++W F+CVSMGNPHAITF  +D      D +D  L+ VGP FE++PVFP RTNTEFV   S +   MLVWERG+G T+ACGTGACA +VA VL GR ++     + LPGG L IEW  + N + MTGPAELVFEG
Sbjct:   23 FAKYQGLGNDFILVDNRHSATPLVTPSQAAKACDRHFGVGADGVIFALPPQAPDSDYAMRIYNSDGSEPEMCGNGIRCLARFVAELDADAPR--RYRVDTLAGLIQPELLPGG-RVRVDMGEPILEANAIPTTLQPTTPEGAVVKQCLTVDGKEWFFTCVSMGNPHAITFGYQDGTLIQTDSID--LQRVGPLFEHNPVFPARTNTEFVEILSPSHVRMLVWERGAGITLACGTGACATVVAGVLEGRLDRSCR--VDLPGGPLEIEWRQADNRIYMTGPAELVFEG 302          
BLAST of Gcaud1864.t1 vs. uniprot
Match: A0A7S2S1Q0_9STRA (Diaminopimelate epimerase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S1Q0_9STRA)

HSP 1 Score: 303 bits (776), Expect = 2.580e-99
Identity = 155/284 (54.58%), Postives = 192/284 (67.61%), Query Frame = 0
Query:    2 TAFRKYHGLGNDFVLIDNRHSSAPVLTPTEAEAVCNRNTGVGADGVIFLLPPTKTTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVHGRTTGKYVVDTGAGEIVPQMESGSEKVKVDMGAPILEPEHVPTMLNTSAANEYQDILKGLAGRDWTFSCVSMGNPHAITFVAKDVYDDMDSRLEAVGPSFENHPVFPQRTNTEFVYQHSKTDFDMLVWERGSGRTMACGTGACAVLVAAVLTGRAEKDVPTVIHLPGGDLTIEWESSSNHVLMTGPAELVFEG 285
             AF+KYHGLGNDF+L+DNRHS+ PV++P +A  +C+RN GVG DGVIF LP    ++D+ MR+YNSDG+EPEMCGNGIRC+ARF   L     T   Y ++TGAG I+P +  G   V VDMG PILE   VPT L  +  +   +    +A +DW  +CVSMGNPHA+ F+  D  D +D  L  VGP FE+HP FP R NTEFV   S T   M VWERG+G T+ACGTGACA+ VAA+L G+  +    V+ LPGGDL IEW   +N   MTGPAELVF G
Sbjct:   50 VAFQKYHGLGNDFILVDNRHSTDPVMSPEQAARMCDRNFGVGGDGVIFALP--SESADYAMRIYNSDGSEPEMCGNGIRCMARFLQKLDGSEGTETTYTINTGAGPIIPVIR-GDGLVTVDMGPPILEGPKVPTTLAPTQGDVVINAPLRVADQDWEVTCVSMGNPHAVVFI--DNVDSLD--LHHVGPQFESHPEFPARINTEFVEVKSPTHLKMKVWERGAGPTLACGTGACALTVAAILAGKTSERT-CVVTLPGGDLEIEWREENNRCYMTGPAELVFSG 325          
BLAST of Gcaud1864.t1 vs. uniprot
Match: A0A7S3AC78_9RHOD (Diaminopimelate epimerase n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3AC78_9RHOD)

HSP 1 Score: 301 bits (772), Expect = 5.240e-99
Identity = 153/290 (52.76%), Postives = 198/290 (68.28%), Query Frame = 0
Query:    2 TAFRKYHGLGNDFVLIDNRHSSAPVLTPTEAEAVCNRNTGVGADGVIFLLPPTKTTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVHGRTTGKYVVDTGAGEIVPQMESGSEKVKVDMGAPILEPEHVPTML----NTSAANEYQDILKGLAGRDWTFSCVSMGNPHAITFVAKDVYDDMDSRLEAVGPSFENHPVFPQRTNTEFVYQHSKTDFDMLVWERGSGRTMACGTGACAVLVAAVLTGRAEKDVPTVIHLPGGDLTIEWESSSNHVLMTGPAELVFEGKL 287
              F+KYHG+GNDF+L+DN  SS  +LT  E+  VC+R+ GVGADGVIF++PP    SDF MR+YNSDG+EPEMCGNGIRCLARFA ++    +T   Y +DT AG IVP++    + V+VDMG P L P  +P++L    +T  A  + D      G DW    +  GNPHA+ FV ++ +  +D  LE+VGP +ENH  FP RTNTEF+Y  S  + D LVWERG+GRT+ACGTGACA +VA  LTGR  + V   ++LPGG L IEW    NH+ MTGPAELV+EG++
Sbjct:   30 VEFQKYHGIGNDFILVDNMKSSDTLLTADESVKVCDRHFGVGADGVIFMMPPVNDDSDFSMRIYNSDGSEPEMCGNGIRCLARFAHEVLDSEKTV--YKIDTLAGLIVPEISG--DMVRVDMGEPELNPPKIPSLLTPDPDTKEATYHVD------GTDWQVVPIGTGNPHAVVFVDQEQFRTLDENLESVGPLYENHETFPARTNTEFIYVKSPEEIDFLVWERGAGRTLACGTGACASVVACSLTGRTGRKV--AVNLPGGRLDIEW-GEDNHMYMTGPAELVYEGEI 306          
BLAST of Gcaud1864.t1 vs. uniprot
Match: A0A0K9QWV2_SPIOL (Diaminopimelate epimerase n=4 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9QWV2_SPIOL)

HSP 1 Score: 303 bits (776), Expect = 8.510e-99
Identity = 159/296 (53.72%), Postives = 204/296 (68.92%), Query Frame = 0
Query:    1 MTAFRKYHGLGNDFVLIDNRHSSAPVLTPTEAEAVCNRNTGVGADGVIFLLPPTKTTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADL-GVHGRTTGKYVVDTGAGEIVPQMESGSEKVKVDMGAPILEPEHVPTMLNTSAANEYQDILKG---LAGRDWTFSCVSMGNPHAITFVAKD----VYDDMDSRLEAVGPSFENHPVFPQRTNTEFVYQHSKTDFDMLVWERGSGRTMACGTGACAVLVAAVLTGRAEKDVPTVIHLPGGDLTIEWESSSNHVLMTGPAELVFEGKLP 288
            +  F KYHGLGNDF+L+DNR S  P +TP +A  +C+RN GVGADGVIF +P T  T D+ MR++NSDG+EPEMCGNG+RC AR+ A++  +HG+ +  + V TGAG IVP+++    KVKVDMG P+L    VPT L    AN+   ++K    + G  W+ +CVSMGNPH +TF  K     V D ++  L  +GP FE+H VFP RTNTEFV   S++   M VWERG+G T+ACGTGACAV+VAAVL GRAE++    + LPGG L IEW    NHV MTGPAE+VF G +P
Sbjct:   81 LLHFVKYHGLGNDFILVDNRDSMEPKVTPEQAVKLCDRNFGVGADGVIFAMPGTNGT-DYTMRIFNSDGSEPEMCGNGVRCFARYIAEIENLHGKHS--FTVHTGAGLIVPEIQDDG-KVKVDMGEPVLTAADVPTKL---PANKESSVVKSDLVIDGEAWSVTCVSMGNPHCVTFGRKGEQNLVVDPLN--LAEIGPKFEHHDVFPARTNTEFVQVFSRSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAERNC--TVDLPGGPLEIEWREEDNHVYMTGPAEVVFYGSVP 365          
BLAST of Gcaud1864.t1 vs. uniprot
Match: UPI00090172B8 (diaminopimelate epimerase, chloroplastic isoform X1 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00090172B8)

HSP 1 Score: 303 bits (776), Expect = 9.070e-99
Identity = 158/291 (54.30%), Postives = 202/291 (69.42%), Query Frame = 0
Query:    4 FRKYHGLGNDFVLIDNRHSSAPVLTPTEAEAVCNRNTGVGADGVIFLLPPTKTTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADL-GVHGRTTGKYVVDTGAGEIVPQMESGSEKVKVDMGAPILEPEHVPTMLNTSAANEYQDILKG---LAGRDWTFSCVSMGNPHAITFV--AKDVYDDMDSRLEAVGPSFENHPVFPQRTNTEFVYQHSKTDFDMLVWERGSGRTMACGTGACAVLVAAVLTGRAEKDVPTVIHLPGGDLTIEWESSSNHVLMTGPAELVFEGKLP 288
            F KYHGLGNDF+L+DNR S+ P +TP +A  +C+RN G+GADGVIF +P T  T D+ MR++NSDG+EPEMCGNGIRC A+F  +L  +HG+ +  + + TGAG IVP+++   + VKVDMG P+L+   VPT L    AN  Q ++KG   + G  W  +CVSMGNPH +TF   +KD+  D +  L  +GP FENH +FP RTNTEFV   S +   M VWERG+G T+ACGTGACAV+VAAVL GRA +     + LPGG L IEW    NHV MTGPAE+VF G +P
Sbjct:   87 FVKYHGLGNDFILVDNRDSTEPKITPEQAVKLCDRNFGIGADGVIFAMPGTNGT-DYTMRIFNSDGSEPEMCGNGIRCFAKFIGELENLHGKQS--FTIHTGAGLIVPEIQENGQ-VKVDMGEPVLKASDVPTKL---PANRDQSVVKGGLDVDGTTWNVTCVSMGNPHCVTFGTGSKDLLVD-EINLAEIGPKFENHIMFPARTNTEFVQVLSSSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAGRSC--TVDLPGGPLEIEWNKDDNHVYMTGPAEVVFYGSVP 367          
The following BLAST results are available for this feature:
BLAST of Gcaud1864.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3II36_9FLOR1.520e-16585.33Diaminopimelate epimerase n=1 Tax=Gracilariopsis c... [more]
R7QGK7_CHOCR3.730e-15068.97Diaminopimelate epimerase n=1 Tax=Chondrus crispus... [more]
A0A5J4Z3Z3_PORPP7.400e-10155.24Diaminopimelate epimerase n=1 Tax=Porphyridium pur... [more]
A0A6P5SSD2_PRUAV4.770e-10055.29Diaminopimelate epimerase n=7 Tax=Prunus TaxID=375... [more]
K9TDP4_9CYAN5.830e-10053.29Diaminopimelate epimerase n=2 Tax=Oscillatoriaceae... [more]
A0A087SJN7_AUXPR1.010e-9955.75Diaminopimelate epimerase n=2 Tax=Auxenochlorella ... [more]
A0A7S2S1Q0_9STRA2.580e-9954.58Diaminopimelate epimerase n=2 Tax=Rhizochromulina ... [more]
A0A7S3AC78_9RHOD5.240e-9952.76Diaminopimelate epimerase n=2 Tax=Rhodosorus marin... [more]
A0A0K9QWV2_SPIOL8.510e-9953.72Diaminopimelate epimerase n=4 Tax=Chenopodiaceae T... [more]
UPI00090172B89.070e-9954.30diaminopimelate epimerase, chloroplastic isoform X... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001653Diaminopimelate epimerase, DapFTIGRFAMTIGR00652TIGR00652coord: 3..287
e-value: 2.1E-81
score: 271.3
IPR001653Diaminopimelate epimerase, DapFPFAMPF01678DAP_epimerasecoord: 161..282
e-value: 7.8E-25
score: 87.4
coord: 4..126
e-value: 1.5E-29
score: 102.6
IPR001653Diaminopimelate epimerase, DapFPANTHERPTHR31689DIAMINOPIMELATE EPIMERASE, CHLOROPLASTICcoord: 3..288
IPR001653Diaminopimelate epimerase, DapFHAMAPMF_00197DAP_epimerasecoord: 2..289
score: 34.925236
NoneNo IPR availableGENE3D3.10.310.10Diaminopimelate Epimerase; Chain A, domain 1coord: 4..285
e-value: 6.1E-89
score: 299.9
NoneNo IPR availableGENE3D3.10.310.10Diaminopimelate Epimerase; Chain A, domain 1coord: 120..276
e-value: 6.1E-89
score: 299.9
NoneNo IPR availablePANTHERPTHR31689:SF0DIAMINOPIMELATE EPIMERASE, CHLOROPLASTICcoord: 3..288
NoneNo IPR availableSUPERFAMILY54506Diaminopimelate epimerase-likecoord: 5..288
IPR018510Diaminopimelate epimerase, active sitePROSITEPS01326DAP_EPIMERASEcoord: 66..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1057_length_14482_cov_4.222709contigNODE_1057_length_14482_cov_4.222709:282..1154 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1864.t1Gcaud1864.t1Gracilaria caudata M_176_S67 malemRNANODE_1057_length_14482_cov_4.222709 282..1154 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1864.t1 ID=Gcaud1864.t1|Name=Gcaud1864.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=291bp
MTAFRKYHGLGNDFVLIDNRHSSAPVLTPTEAEAVCNRNTGVGADGVIFL
LPPTKTTSDFGMRLYNSDGTEPEMCGNGIRCLARFAADLGVHGRTTGKYV
VDTGAGEIVPQMESGSEKVKVDMGAPILEPEHVPTMLNTSAANEYQDILK
GLAGRDWTFSCVSMGNPHAITFVAKDVYDDMDSRLEAVGPSFENHPVFPQ
RTNTEFVYQHSKTDFDMLVWERGSGRTMACGTGACAVLVAAVLTGRAEKD
VPTVIHLPGGDLTIEWESSSNHVLMTGPAELVFEGKLPNM*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001653DAP_epimerase_DapF
IPR018510DAP_epimerase_AS