Gcaud1859.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1859.t1
Unique NameGcaud1859.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length163
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1859.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 141..162
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..106
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..72
NoneNo IPR availableTMHMMTMhelixcoord: 118..140
NoneNo IPR availableTMHMMTMhelixcoord: 73..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1223_length_12420_cov_4.813286contigNODE_1223_length_12420_cov_4.813286:9795..10283 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1859.t1Gcaud1859.t1Gracilaria caudata M_176_S67 malemRNANODE_1223_length_12420_cov_4.813286 9795..10283 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1859.t1 ID=Gcaud1859.t1|Name=Gcaud1859.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=163bp
MPKDRSKASKAHRPTSPTRTKHSHHSKSPKQKNVTAPHTSPPSPPPSTEK
VRDIQLADVERGRDYQRDSPVTIFLAGLLGFVIGLLLGLLIALVVSVIVC
CCFYDARGWWRDRKKRAFLIGFILGILVAIVIVLIVALALGIRDRDREVI
AVPAGTTPVIIS*
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