Gcaud1858.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1858.t1
Unique NameGcaud1858.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length568
Homology
BLAST of Gcaud1858.t1 vs. uniprot
Match: A0A2V3IGB2_9FLOR (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGB2_9FLOR)

HSP 1 Score: 898 bits (2321), Expect = 0.000e+0
Identity = 437/567 (77.07%), Postives = 503/567 (88.71%), Query Frame = 0
Query:    1 MAYFIENCVRSKRATLAHLAALLSICDGTRTSEGDTGWISVQTKMQPKNLNPSATNEEYINDELLAKAITSRPGSLQITKLSYGWEIFIVTDVRHAVTATVLGATREKGFSVNPNMRRTSKRKPKIIPKSFFIQTFGCQMNESDSERMAAELESEGYHKVDDPNKSALYLLNTCALRDHAEQKVYSYLGSHAQRKWDAPQEVTLVVAGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYLTSKAQVVAVEPIHIHEDISKPKRSSKLTAWVSVIYGCLERCTYCVVPNTRGLEQSRSMASIRKEIETLAAEGYREVVLLGQNVDAYGRDLFPRVTFSELLRYVHDVDGIERIRFTTGHPRYISDNLIDTVFELPKVMEHFHIPPQSGDSSILKAMKRGYTRERYIQIARKIRDKMPDASICADMIVGFPGETDEAFQNSVSLADEVVFDANMVRAYSARPNTSAASLPDQLSEQIKMERLQIMNKNMKHHAEIRSRRYLGRCVEVLVDGVNPKRANEVSGRERTNRVVFCEGGSELIGKVIEVRVQEAYPFSLRGKITRIIK 567
            MA FI N V+S+RA L+ +A LLS+CD TR S GDTGWIS       K+  PS+     + DE L  A+ +RP +LQ  + SYGWE++IV+D+R +V  T LGATREKG++VNPNMRRTS++ P IIP SFFIQTFGCQMN SDSER+AA+LES+GYH++DDPNKSA+Y+LNTCALRDHAEQKVYSYLG HAQRKWDAPQ+V L+VAGCVAQQEG+ALLSRVPEIDIVMGPQYANR+ DV+NLY TSKAQVVAV+PIHIHEDISKPKRSS +TAWV++IYGCLERCTYCVVPNTRGLEQSR M+SIR+EIE LAAEGYREVVLLGQNVDAYGRDL+P+ T SELLRY+HDVDGIERIRFTTGHPRYIS+NLI+TV+ELPKVMEHFH+PPQSGDS +LKAMKRGY+RERYI IAR+IR+KMPDA+ICAD IVGFPGETD+AFQN+VSLADEVVFDANMVRAYSARPNT AAS PDQ++E++KMERL IMNK M+  AE RSRRYLGR VEVLV+G+NPKR+NEVSGRERTNR+VFCEGG+ELIGK+IEV V EAYPFSLRG + R+IK
Sbjct:  101 MASFIHNAVKSRRAMLSQMATLLSVCDQTRLSAGDTGWISTAPH-HSKSAQPSSP----VPDEFLQVALRARPATLQFEQFSYGWEVYIVSDIRQSVQPTKLGATREKGYTVNPNMRRTSQKPPHIIPHSFFIQTFGCQMNASDSERIAAQLESQGYHQIDDPNKSAIYMLNTCALRDHAEQKVYSYLGPHAQRKWDAPQQVMLIVAGCVAQQEGDALLSRVPEIDIVMGPQYANRITDVLNLYHTSKAQVVAVDPIHIHEDISKPKRSSSITAWVNIIYGCLERCTYCVVPNTRGLEQSRPMSSIRREIEALAAEGYREVVLLGQNVDAYGRDLYPKATLSELLRYIHDVDGIERIRFTTGHPRYISENLINTVYELPKVMEHFHVPPQSGDSQVLKAMKRGYSRERYINIARRIREKMPDAAICADTIVGFPGETDDAFQNTVSLADEVVFDANMVRAYSARPNTIAASRPDQVNEEVKMERLAIMNKKMREQAEQRSRRYLGRTVEVLVEGMNPKRSNEVSGRERTNRIVFCEGGTELIGKLIEVTVLEAYPFSLRGILRRVIK 662          
BLAST of Gcaud1858.t1 vs. uniprot
Match: R7QN23_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN23_CHOCR)

HSP 1 Score: 766 bits (1978), Expect = 1.480e-273
Identity = 375/564 (66.49%), Postives = 456/564 (80.85%), Query Frame = 0
Query:    9 VRSKRATLAHLAALLSICDGTRTSEGDTGWISVQTKMQPKNLNPSATNEEYIND---------ELLAKAITSRPGSLQITKLSYGWEIFIVTDVRHAVTATVLGATREKGFSVNPNMRRTSKRKPKIIPKSFFIQTFGCQMNESDSERMAAELESEGYHKVDDPNKSALYLLNTCALRDHAEQKVYSYLGSHAQRKWDAPQEVTLVVAGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYLTSKAQVVAVEPIHIHEDISKPKRSSKLTAWVSVIYGCLERCTYCVVPNTRGLEQSRSMASIRKEIETLAAEGYREVVLLGQNVDAYGRDLFPRVTFSELLRYVHDVDGIERIRFTTGHPRYISDNLIDTVFELPKVMEHFHIPPQSGDSSILKAMKRGYTRERYIQIARKIRDKMPDASICADMIVGFPGETDEAFQNSVSLADEVVFDANMVRAYSARPNTSAASLPDQLSEQIKMERLQIMNKNMKHHAEIRSRRYLGRCVEVLVDGVNPKRANEVSGRERTNRVVFCEGGSE-LIGKVIEVRVQEAYPFSLRGKI 562
            VR+K ++LA L++LLS+CD +++  GDTGW+ V         N  A   ++++D         ELL  A+ +RPG+LQ  +LSYGWE+F+V DVRHAV  T+ GA R  GF V PNMRRTS +KP I   S++IQTFGCQMN SDSERMAAELE +GYH  DDP KSALYLLNTCALRDHAEQKVYSYLG HAQRKWDAP EVTLVVAGCVAQQEG+ LLSRVPE+DIVMGPQYANR+ +V++ +  +  Q+VAV+PIHI ED SKP RSSK+TAWV++IYGCLE+C+YCVVPNTRGLEQSR+M SIR E++ LA +GYREVVLLGQNVDAYGRDL+P+ TFS+LLR++HDVDGIER+RFTTGHPRYIS+NLI TV ELPKVMEHFH+PPQSGD+ +LK M RGYTRERY+ IAR++R +MPDASICAD IVGFPGE++EAF+N+V +  +VVFD+NMVRAYSARPNT+A    DQ+ E++K  RL +MN+ M+  AE RS+RYLGR VEVLV+GVN K   EV GRER+NRVVF EG +E  +GK+  V V EA+ FSLRG++
Sbjct:    6 VRAKESSLAELSSLLSVCDTSKSKSGDTGWVQVPNPNMTVR-NALADEAQHLDDLVKSVAMHPELLHAAMAARPGALQTVQLSYGWEVFVVEDVRHAVVPTLRGARRGPGFPVTPNMRRTSPKKPVIDDMSYYIQTFGCQMNVSDSERMAAELERKGYHATDDPKKSALYLLNTCALRDHAEQKVYSYLGPHAQRKWDAPSEVTLVVAGCVAQQEGDKLLSRVPEVDIVMGPQYANRIGEVLDDFAENMMQIVAVDPIHIQEDFSKPVRSSKITAWVNIIYGCLEKCSYCVVPNTRGLEQSRTMESIRAELQGLARDGYREVVLLGQNVDAYGRDLYPKRTFSDLLRFIHDVDGIERVRFTTGHPRYISENLITTVAELPKVMEHFHVPPQSGDNGVLKEMGRGYTRERYMDIARRVRKRMPDASICADTIVGFPGESEEAFENTVDMVKQVVFDSNMVRAYSARPNTTAGLREDQVEEEVKARRLAVMNRLMREQAEKRSQRYLGRRVEVLVEGVNEKVDGEVMGRERSNRVVFFEGAAEEYVGKIAVVEVDEAFAFSLRGRV 568          
BLAST of Gcaud1858.t1 vs. uniprot
Match: A0A2V3J037_9FLOR (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J037_9FLOR)

HSP 1 Score: 576 bits (1485), Expect = 1.310e-197
Identity = 291/557 (52.24%), Postives = 383/557 (68.76%), Query Frame = 0
Query:   13 RATLAHLAALLSICDGTRTSEGDTGWISVQTKMQPKNLNPSATNEEYINDELLAKAITSRPGSLQITKLSYGWEIFIVTDVRHAV------TATVLGATREKGFSVNPNMRRTSKRKPKIIPKSFFIQTFGCQMNESDSERMAAELESEGYHKVDDPNKSALYLLNTCALRDHAEQKVYSYLGSHAQRKWDAPQEVTLVVAGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYLTSKAQVVAVEPIHIHEDISKPKRSSKLTAWVSVIYGCLERCTYCVVPNT-RGLEQSRSMASIRKEIETLAAEGYREVVLLGQNVDAYGRDLFPRVTFSELLRYVHDVDGIERIRFTTGHPRYISDNLIDTVFELPKVMEHFHIPPQSGDSSILKAMKRGYTRERYIQIARKIRDKMPDASICADMIVGFPGETDEAFQNSVSLADEVVFDANMVRAYSARPNTSAASLPDQLSEQIKMERLQIMNKNMKHHAEIRSRRYLGRCVEVLVDGVNPKRANEVSGRERTNRVVFCEGG-SELIGKVIEVRVQEAYPFSLRGK 561
            +A LA +AA LS C+ ++   GD GW         + + P    E  IND+LLA A+ SRP +L+  +  +GW +FIV + RH +      TA+     R++G  VN       ++ P+ +P ++ +QT GCQMN SDSERMA EL   GY +  DP +++L +LNTC +R+HAE KVYSY+G H  RK   P +VTL VAGCVAQQEGE +L R+PE+D+V GPQY NRL D++     +  QV A +P HI EDISKPKR S ++AW++VIYGC E C++C V N  R +EQSRSM SIR EIE  A +GYRE+VLLGQN+DAYGRD++P+ TFS+LL ++HD+DGIERIRFTT HPRYIS NL+D    LP+VM  FHIPPQSGD+ +LKAM+RGYT E Y  + ++IR  +PDA+IC DMIVGFPGET+E FQ S+ L D V FD     AYS RP T AA + +Q+ + +KM+RL  MN+ +K HA  RS RY+GR   VLV+  NPK A +V GR  TNR V+ +G   EL GK++ V +++AYPFSL+G+
Sbjct:  100 KARLADVAASLSTCNASKHQGGDLGW------WWKEEIVPENVEEFGINDQLLAAALRSRPHTLERVQTKHGWHVFIVEEARHVLRTKHERTASRQNPNRKRGVGVN------GEQVPRPLPHTYAVQTLGCQMNRSDSERMAGELNRLGYTETSDPFQASLLILNTCNIREHAESKVYSYVGRHVMRKRMYPNDVTLCVAGCVAQQEGEKMLRRIPELDLVFGPQYVNRLGDLLTDVERNGCQVAATDPTHIQEDISKPKRESSVSAWINVIYGCGENCSFCTVGNVVRSVEQSRSMESIRSEIEEAARDGYREIVLLGQNIDAYGRDMYPKRTFSQLLDFIHDIDGIERIRFTTSHPRYISQNLVDMCATLPRVMPFFHIPPQSGDNDVLKAMRRGYTVEAYEAVVKRIRKSIPDAAICGDMIVGFPGETEEQFQKSLELMDRVKFDVMNTAAYSPRPQTPAALMENQVPDAVKMDRLYRMNEVVKAHALERSLRYIGRTELVLVEHQNPKNARQVVGRTPTNRSVYFDGSIEELRGKIVSVEIEDAYPFSLKGR 644          
BLAST of Gcaud1858.t1 vs. uniprot
Match: R7QB29_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB29_CHOCR)

HSP 1 Score: 561 bits (1446), Expect = 1.260e-191
Identity = 285/553 (51.54%), Postives = 380/553 (68.72%), Query Frame = 0
Query:   11 SKRATLAHLAALLSICDGTRTSEGDTGWISVQTKMQPKNLNPSATNEEYINDELLAKAITSRPGSLQITKLSYGWEIFIVTDVRHAVTATVLGATREKGFSVNPNMRRTSKRKPKIIPKSFFIQTFGCQMNESDSERMAAELESEGYHKVDDPNKSALYLLNTCALRDHAEQKVYSYLGSHAQRKWDAPQEVTLVVAGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYLTSKAQVVAVEPIHIHEDISKPKRSSKLTAWVSVIYGCLERCTYCVVPNT-RGLEQSRSMASIRKEIETLAAEGYREVVLLGQNVDAYGRDLFPRVTFSELLRYVHDVDGIERIRFTTGHPRYISDNLIDTVFELPKVMEHFHIPPQSGDSSILKAMKRGYTRERYIQIARKIRDKMPDASICADMIVGFPGETDEAFQNSVSLADEVVFDANMVRAYSARPNTSAASLPDQLSEQIKMERLQIMNKNMKHHAEIRSRRYLGRCVEVLVDGVNPKRANEVSGRERTNRVVFCEGGSELIGKVIEVRVQEAYPFSLRGKI 562
            ++  +LA +A ++S C  ++ S GD GW      +      P+   +  +N++LL  A+ +RP  L+  K   GW +F+V +VRH +  T    T  +  +   + + TS      + K++ +QT GCQMN SDSERMA EL   GY ++DDP K+++ +LNTC +RDHAE+KVYSY+G HA RK   PQ+VTL VAGCVAQQEGE +L R+PE+D+V GPQYANRL D++    T++ QV A +PIHI EDISKPKR S +TAWV+V+YGC E CT+C V N  R +EQSR+++SIR E+E +A  G REVVLLGQN+DAYGRD++P+ TF+ELLR VHDVDGI+RIRFTT HPRYIS NL+ T  ELP VM +FHIPPQSG+  +LK MKRGYT + +  +  +IR+  PDA+IC DMIVGFPGET+E FQ+S+ L ++V FD     AYS RPNT AA   +Q+S+ +K +RL  MN+ +  HA  RS RY+GR   VLV+  + K   EV GR  TNR V   G  EL GK++ V++ EA PF+L G+I
Sbjct:  106 AREESLAKMAKMVSTCSASKESGGDLGWWWQDEAI------PADREQFGVNEQLLGAALRTRPNRLEQVKTEDGWHVFMVEEVRHVIR-TKHERTPSRRKADKKDFKNTSAEALVPVAKTYAMQTLGCQMNRSDSERMAGELARIGYKEIDDPFKASVLVLNTCNIRDHAEKKVYSYIGRHAARKRKYPQDVTLAVAGCVAQQEGERMLRRIPELDLVFGPQYANRLGDLLKDVETNQCQVAATDPIHIQEDISKPKRESTVTAWVNVMYGCGENCTFCTVGNVVRSVEQSRTISSIRAEMEDIARSGIREVVLLGQNIDAYGRDMYPKKTFAELLRNVHDVDGIDRIRFTTSHPRYISRNLVTTCAELPNVMPYFHIPPQSGNDDVLKEMKRGYTVKAFKAVVNRIREATPDAAICGDMIVGFPGETEEQFQDSLKLMEDVKFDVMNTAAYSPRPNTPAAEYSNQISDAMKADRLARMNELVTRHALERSMRYVGRVEHVLVEQESSKTPGEVVGRTPTNRTVRFSGSRELRGKIVPVKIVEALPFTLLGEI 651          
BLAST of Gcaud1858.t1 vs. uniprot
Match: A0A7S0FYJ0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FYJ0_9RHOD)

HSP 1 Score: 531 bits (1368), Expect = 1.770e-182
Identity = 265/482 (54.98%), Postives = 360/482 (74.69%), Query Frame = 0
Query:   89 IVTDVRHAVTATVLGATREKGFSVNPNMRRTSKRK--PKIIPKSFFIQTFGCQMNESDSERMAAELESEGYHKVDDPNKSALYLLNTCALRDHAEQKVYSYLGSHAQRKWDAPQEVTLVVAGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYLTSKAQVVAVEPIHIHEDISKPKRSSKLTAWVSVIYGCLERCTYCVVPNTRGLEQSRSMASIRKEIETLAAEGYREVVLLGQNVDAYGRDLFPRVTFSELLRYVHDVDGIERIRFTTGHPRYISDNLIDTVFELPKVMEHFHIPPQSGDSSILKAMKRGYTRERYIQIARKIRDKMPDASICADMIVGFPGETDEAFQNSVSLADEVVFDANMVRAYSARPNTSAASLPDQLSEQIKMERLQIMNKNMKHHAEIRSRRYLGRCVEVLVDGVNPKRANEVSGRERTNRVVFCEGG-SELIGKVIEVRVQEAYPFSLRGKITRIIK 567
            +V D RH +  ++     ++G  VN      ++R   P++I  ++ +QT GCQMN++DSE+M+ ELE+ G+ ++DDP +S + + NTC++RDHAEQKVYSY+G HA+RKW  P EVT+VV+GCVAQQEGE LL R+PE+D+VMGPQY+NRL ++++  +    QV A EP+HI EDISKPKR+SK+TAWV++IYGC ERC+YCVVP TRGLEQSR   SI++EI+ LA +G +EVVLLGQN+DAYGRDL PR + ++LLR+VHDVDGIERIRFTT HPRY++D LI   +ELPK+ E+FH+P QSGD  +LK MKRGYT +R+ QIA +IR  MPDA++ AD IVGFPGET+E FQ+++ L +E+ FD     AYS RPNT AA    Q++E +K+ERL+ +N+     A  RS+RYLGR  E+LV+  N K   +V GR RTNR+ F +G   EL GK++ V+++EA  FSL G++  +I+
Sbjct:    1 VVEDARHTLQTSL----SKRGAPVNLTQIPRNQRDAIPEMIKGTYCVQTMGCQMNQADSEKMSGELEAAGFKEIDDPFRSNVIVFNTCSIRDHAEQKVYSYVGRHARRKWQNP-EVTIVVSGCVAQQEGEKLLRRIPEVDVVMGPQYSNRLRELLDS-VNQGNQVCATEPVHIMEDISKPKRNSKVTAWVNIIYGCNERCSYCVVPTTRGLEQSRPRDSIKEEIKQLAEQGVKEVVLLGQNIDAYGRDLRPRDSLADLLRFVHDVDGIERIRFTTSHPRYMTDRLIKACYELPKLCEYFHVPFQSGDDKVLKEMKRGYTAKRFKQIAERIRMYMPDAALSADAIVGFPGETEEEFQHTIDLMEEIRFDTVHTAAYSPRPNTLAAVWDTQVAEDVKVERLRRINEQTAKDAHDRSQRYLGRTEEILVEERNDKDPTQVLGRTRTNRLTFFKGNIDELRGKLVTVKIKEARTFSLTGELVEVIR 476          
BLAST of Gcaud1858.t1 vs. uniprot
Match: A0A7S0ZI68_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZI68_9RHOD)

HSP 1 Score: 518 bits (1333), Expect = 2.130e-174
Identity = 279/576 (48.44%), Postives = 372/576 (64.58%), Query Frame = 0
Query:    1 MAYFIENCVRSKRATLAHLAALLSICDGTRTSEGDTGWIS---VQTKMQPKNLNPSATNEEYI----NDELLAKAITSRPGSLQITKL----SYGWEIFIVTDVRHAVTATVL--GATREKGFSVNPNMRRTSKRKPKIIPKSFFIQTFGCQMNESDSERMAAELESEGYHKVDDPNKSALYLLNTCALRDHAEQKVYSYLGSHAQRKWDAPQEVTLVVAGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYLTSKAQVVAVEPIHIHEDISKPKRSSKLTAWVSVIYGCLERCTYCVVPNTRGLEQSRSMASIRKEIETLAAEGYREVVLLGQNVDAYGRDLFPRVTFSELLRYVHDVDGIERIRFTTGHPRYISDNLIDTVFELPKVMEHFHIPPQSGDSSILKAMKRGYTRERYIQIARKIRDKMPDASICADMIVGFPGETDEAFQNSVSLADEVVFDANMVRAYSARPNTSAASLPDQLSEQIKMERLQIMNKNMKHHAEIRSRRYLGRCVEVLVDGVNPKRANEVSGRERTNRVVFCEGG-SELIGKVIEVRVQEAYPFSLRGKI 562
            +A +I + ++S  +  A LA  LS C+ T+ S G  GWI    +    Q    +PS    ++I      +LL  A  +RP  L +TK     ++ W +F+V D  H +       G+T + G  +            +    S+ I+T GCQ N SDSERMA+ LE+ G+H   DP  + + +LNTCA+R+HAE KVY +LG HA RK      V LVV+GCVAQQEGE LL +VPE+DI+ GPQYANRL +++     +  Q+ A  PIH+ ED+S P R+SK+TAWV+VIYGC ERCTYCVVP+TRGLEQSRSM SIR EI   A  G +E+VLLGQN+DAYGRDL P+ TF++LL Y+HDV+GI+RIRF T HPRY+S  LID   +L KV EHFH+P QSG   IL+ M RGYT +RY+QI + IRDKMP A I  D IVGFP E++E F++++ L   V FD     AYS RPNT AA + +Q+ E+IK ERL+ +N  +K  A  RS RYLG   EVLV+ +NPK  N+V GR + NR+VF +G  SEL G +++VR+ + + F L G++
Sbjct:   91 LADYILDAIKSNPSEFATLANQLSQCEFTKDSHGHFGWIPNPVITLSSQFTIDSPSPQCPQHIIHSIPSDLLQNAFQTRP--LSVTKFYSESNHSWYVFLVNDALHKLHFETFSKGSTSKLGTDL------------RFEQNSYVIETMGCQANSSDSERMASALENAGFHAAKDPKSAHIVVLNTCAIREHAEHKVYGHLGVHAIRK-QRDSRVLLVVSGCVAQQEGETLLRKVPELDIIAGPQYANRLGELVKHVEENGVQICATNPIHVSEDLSNPVRTSKVTAWVNVIYGCNERCTYCVVPSTRGLEQSRSMVSIRNEIVKAAESGVKEIVLLGQNIDAYGRDLTPKNTFTQLLEYIHDVEGIKRIRFLTSHPRYMSSRLIDACAKLEKVCEHFHVPFQSGSDEILQKMSRGYTAQRYLQIIQNIRDKMPHAGISGDAIVGFPEESEEQFESTLDLMRSVGFDLVNTAAYSPRPNTPAALMKNQVPEEIKQERLKRINMLVKQQAAERSARYLGLIEEVLVESMNPKNENQVCGRTQGNRIVFFDGKLSELFGTLVQVRITQTHAFYLMGEV 651          
BLAST of Gcaud1858.t1 vs. uniprot
Match: MIAB_MICAN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=78 Tax=Microcystis TaxID=1125 RepID=MIAB_MICAN)

HSP 1 Score: 501 bits (1290), Expect = 4.010e-171
Identity = 262/444 (59.01%), Postives = 324/444 (72.97%), Query Frame = 0
Query:  128 PKSFFIQTFGCQMNESDSERMAAELESEGYHKVDDPNKSALYLLNTCALRDHAEQKVYSYLGSHAQRKWDAPQEVTLVVAGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYLTSKAQVVAVEPIHIHEDISKPKRSSKLTAWVSVIYGCLERCTYCVVPNTRGLEQSRSMASIRKEIETLAAEGYREVVLLGQNVDAYGRDLFPRVT--------FSELLRYVHDVDGIERIRFTTGHPRYISDNLIDTVFELPKVMEHFHIPPQSGDSSILKAMKRGYTRERYIQIARKIRDKMPDASICADMIVGFPGETDEAFQNSVSLADEVVFDANMVRAYSARPNTSAASLPDQLSEQIKMERLQIMNKNMKHHAEIRSRRYLGRCVEVLVDGVNPKRANEVSGRERTNRVVFCEGG-SELIGKVIEVRVQEAYPFSLRGKI 562
            P+ + I TFGCQMN++DSERMA  LE  G+   +D N++ L L NTC +RD+AEQKVYSYLG  A+RK   P ++TL+VAGCVAQQEGE LL RVPE+D+++GPQ+ANRL D++       +QVVA EPIHI EDI+KP+R S +TAWV+VIYGC ERCTYCVVP  RG+EQSR+ A+IR E+  L  +GY+E+ LLGQN+DAYGRDL P VT        F++LL YVHDV GIER+RF T HPRY ++ LI    ELPKV EHFHIP QSGD+ ILKAMKRGYT+E+Y QI   IRD MPDA+I AD IVGFPGET+  F+N++ L DE+ FD     AYS RP T AA   DQLSEQ+K +RLQ +N  +   A  RS+RYLGR  E+LV+ VNPK A++V GR R NR+ F  G   EL GK ++V++ E  PFSL G I
Sbjct:    5 PRRYHITTFGCQMNKADSERMAGILEDLGFQWSEDANEADLILYNTCTIRDNAEQKVYSYLGRQAKRKQTQP-DLTLIVAGCVAQQEGEQLLRRVPEVDLIIGPQHANRLGDLLQQVFDG-SQVVATEPIHIMEDITKPRRDSNITAWVNVIYGCNERCTYCVVPGVRGVEQSRTPAAIRAEMAQLGQQGYQEITLLGQNIDAYGRDL-PGVTASGRHLHNFTDLLYYVHDVAGIERLRFATSHPRYFTERLIKACQELPKVCEHFHIPFQSGDNDILKAMKRGYTQEKYRQIIANIRDLMPDAAISADAIVGFPGETEAQFENTLKLVDEIGFDQLNTAAYSPRPGTPAAIWDDQLSEQVKSDRLQRLNHLVATKAAERSQRYLGRIEEILVEDVNPKDASQVMGRTRGNRLTFFTGDIEELRGKFVKVKITEVRPFSLTGVI 445          
BLAST of Gcaud1858.t1 vs. uniprot
Match: A0A2T1LZI9_9CHRO (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=3 Tax=Chroococcales TaxID=1118 RepID=A0A2T1LZI9_9CHRO)

HSP 1 Score: 498 bits (1283), Expect = 6.740e-170
Identity = 260/441 (58.96%), Postives = 323/441 (73.24%), Query Frame = 0
Query:  129 KSFFIQTFGCQMNESDSERMAAELESEGYHKVDDPNKSALYLLNTCALRDHAEQKVYSYLGSHAQRKWDAPQEVTLVVAGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYLTSKAQVVAVEPIHIHEDISKPKRSSKLTAWVSVIYGCLERCTYCVVPNTRGLEQSRSMASIRKEIETLAAEGYREVVLLGQNVDAYGRDLFPRVT--------FSELLRYVHDVDGIERIRFTTGHPRYISDNLIDTVFELPKVMEHFHIPPQSGDSSILKAMKRGYTRERYIQIARKIRDKMPDASICADMIVGFPGETDEAFQNSVSLADEVVFDANMVRAYSARPNTSAASLPDQLSEQIKMERLQIMNKNMKHHAEIRSRRYLGRCVEVLVDGVNPKRANEVSGRERTNRVVFCEGGSE-LIGKVIEVRVQEAYPFSLRG 560
            + + I TFGCQMN++DSERMA  LE  G++  +DPN++ L L NTC +RD+AEQKVYSYLG  A+RK + P E+TL+VAGCVAQQEGE LL RVPE+D+VMGPQ+ANRL D++        QVVA EP+HI EDI+KP+R SK+TAWV+VIYGC ERCTYCVVP+ RG+EQSR+  +IR E+E L   GY+E+ LLGQN+DAYGRDL P VT         ++LL YVHDV G+ER+RF T HPRY ++ LI   +ELPKV EHFHIP QSGD+ +LKAMKRGYT ERY QI  KIR+ MPDASI AD IVGFPGET+  F+N++ L D++ FD     AYS RP T AA   +QLSE++K +RLQ +N  +   A  RS RYLGR  EVLV+ VNPK   +V GR R NR+ F +G  E L G++I+V+V E   FSL G
Sbjct:    8 RRYHITTFGCQMNKADSERMAGILEEMGFNWSEDPNEADLILYNTCTIRDNAEQKVYSYLGRQAKRKQEHP-ELTLIVAGCVAQQEGEKLLRRVPELDLVMGPQHANRLEDLLQQVFDGN-QVVATEPVHIIEDITKPRRESKVTAWVNVIYGCNERCTYCVVPSVRGVEQSRNREAIRAEMEELGRLGYKEITLLGQNIDAYGRDL-PGVTATGRHLHTLTDLLYYVHDVSGVERLRFATSHPRYFTERLIKACYELPKVCEHFHIPFQSGDNELLKAMKRGYTHERYRQIIEKIREYMPDASISADAIVGFPGETEAQFENTLKLVDDIGFDQLNTAAYSPRPGTPAAIWDNQLSEEVKSDRLQRLNHLVSQKAADRSGRYLGRIEEVLVEDVNPKDPTQVMGRTRGNRLTFFKGNIEQLKGQLIKVKVTEVRAFSLTG 445          
BLAST of Gcaud1858.t1 vs. uniprot
Match: UPI001683D0E0 (tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB n=1 Tax=Leptolyngbya sp. FACHB-261 TaxID=2692806 RepID=UPI001683D0E0)

HSP 1 Score: 498 bits (1282), Expect = 6.750e-170
Identity = 255/433 (58.89%), Postives = 318/433 (73.44%), Query Frame = 0
Query:  129 KSFFIQTFGCQMNESDSERMAAELESEGYHKVDDPNKSALYLLNTCALRDHAEQKVYSYLGSHAQRKWDAPQEVTLVVAGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYLTSKAQVVAVEPIHIHEDISKPKRSSKLTAWVSVIYGCLERCTYCVVPNTRGLEQSRSMASIRKEIETLAAEGYREVVLLGQNVDAYGRDLFPRVTFSELLRYVHDVDGIERIRFTTGHPRYISDNLIDTVFELPKVMEHFHIPPQSGDSSILKAMKRGYTRERYIQIARKIRDKMPDASICADMIVGFPGETDEAFQNSVSLADEVVFDANMVRAYSARPNTSAASLPDQLSEQIKMERLQIMNKNMKHHAEIRSRRYLGRCVEVLVDGVNPKRANEVSGRERTNRVVFCEGG-SELIGKVIEVRVQEAYPFSLRG 560
            + + I TFGCQMN++DSERMA  LE  G+   +DP  + L L NTC +RD+AEQKVYSY+G  A+RK   P  +TLVVAGCVAQQEGEALL RVPE+D+VMGPQ+ANRL+D++       +QVVA EP+HI EDI+KP+R SK+TAWV+VIYGC ERCTYCVVP+ RG+EQSR   +IR EIE L  +GY E+ LLGQN+DAYGRD+  + TF++LL  +HDV G+ERIRF T HPRY ++ LI    ELPKV EHFHIP QSGD+ ILKAM RGYT E+Y +I   +R  MPDAS+ AD IVGFPGET+E FQN++ L D++ FD     AYS RPNT AA  PDQLSE+IK +RLQ +N  +   A  R+ RYLGR  EVLV+  NPK   +V GR R+NR+ F +G   +L GK+++V + EA  FSL G
Sbjct:    7 RRYHITTFGCQMNKADSERMAGILEGMGFQFTEDPEAADLVLYNTCTIRDNAEQKVYSYIGRQARRKQQNPN-LTLVVAGCVAQQEGEALLRRVPELDLVMGPQHANRLSDLLEQVFNG-SQVVATEPVHIFEDITKPRRDSKVTAWVNVIYGCNERCTYCVVPSVRGVEQSREPQAIRAEIEELGRQGYTEITLLGQNIDAYGRDI--KTTFTDLLYQIHDVPGLERIRFATSHPRYFTERLIRACAELPKVCEHFHIPFQSGDNEILKAMARGYTHEKYRRIIDTLRRYMPDASVTADAIVGFPGETEEQFQNTLKLVDDIAFDQLNTAAYSPRPNTPAALWPDQLSEEIKSDRLQRLNHLVGQKAAERNLRYLGRTEEVLVEDQNPKNPAQVMGRTRSNRLTFFDGNIHDLKGKLVQVAITEARAFSLTG 435          
BLAST of Gcaud1858.t1 vs. uniprot
Match: A0A0S3UCL0_9CYAN (tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase n=7 Tax=Leptolyngbyaceae TaxID=1890438 RepID=A0A0S3UCL0_9CYAN)

HSP 1 Score: 498 bits (1281), Expect = 1.060e-169
Identity = 256/441 (58.05%), Postives = 325/441 (73.70%), Query Frame = 0
Query:  129 KSFFIQTFGCQMNESDSERMAAELESEGYHKVDDPNKSALYLLNTCALRDHAEQKVYSYLGSHAQRKWDAPQEVTLVVAGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYLTSKAQVVAVEPIHIHEDISKPKRSSKLTAWVSVIYGCLERCTYCVVPNTRGLEQSRSMASIRKEIETLAAEGYREVVLLGQNVDAYGRDLFPRV-------TFSELLRYVHDVDGIERIRFTTGHPRYISDNLIDTVFELPKVMEHFHIPPQSGDSSILKAMKRGYTRERYIQIARKIRDKMPDASICADMIVGFPGETDEAFQNSVSLADEVVFDANMVRAYSARPNTSAASLPDQLSEQIKMERLQIMNKNMKHHAEIRSRRYLGRCVEVLVDGVNPKRANEVSGRERTNRVVFCEGG-SELIGKVIEVRVQEAYPFSLRGK 561
            + + I TFGCQMN++DSERMA  LE+ G+   ++PN++ L L NTC +RD+AEQKVYSYLG  AQRK + P ++T+V+AGCVAQQEGE+LL RVPE+D+VMGPQYAN+L D++        QVVA +PIHI EDI+KP+R S++TAWV+VIYGC ERCTYCVVP+ RG+EQSR+  +IR EIE+LAA+GY+EV LLGQN+DAYGRDL           TF++LL +VHDV+GI+RIRF T HPRY ++ LI    ELPKV EHFHIP QSGD+ +LKAM RGYT ERY +I   IR+ MPDASI AD IVGFPGET+E FQN++ L +++ FD     AYS RP T AA    QLSE++K +RLQ MN+ +   A  RS+RY GR  EVLV+  NPK   +V GR R NR+ F  G   EL GK+++V++ E  PFSL  +
Sbjct:    5 RRYHITTFGCQMNKADSERMAGILETMGFEWSEEPNEADLILYNTCTIRDNAEQKVYSYLGRQAQRKQENP-DITIVIAGCVAQQEGESLLRRVPELDLVMGPQYANQLEDLLEQVFNGN-QVVATDPIHIVEDITKPRRDSQVTAWVNVIYGCNERCTYCVVPSVRGVEQSRTPEAIRAEIESLAAQGYKEVTLLGQNIDAYGRDLPGTTSEGRHLHTFTDLLYFVHDVEGIDRIRFATSHPRYFTERLIRACAELPKVCEHFHIPFQSGDNDVLKAMARGYTHERYRRIINTIREYMPDASISADAIVGFPGETEEQFQNTLKLVEDIGFDLINTAAYSPRPGTPAAVWETQLSEEMKADRLQRMNRLVSQTAADRSQRYAGRIEEVLVEAQNPKDPTQVMGRTRGNRLTFFAGSIDELRGKLVKVKITEVRPFSLTAQ 443          
The following BLAST results are available for this feature:
BLAST of Gcaud1858.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IGB2_9FLOR0.000e+077.07tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
R7QN23_CHOCR1.480e-27366.49Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3J037_9FLOR1.310e-19752.24tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
R7QB29_CHOCR1.260e-19151.54Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0FYJ0_9RHOD1.770e-18254.98Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZI68_9RHOD2.130e-17448.44Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
MIAB_MICAN4.010e-17159.01tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
A0A2T1LZI9_9CHRO6.740e-17058.96tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]
UPI001683D0E06.750e-17058.89tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot... [more]
A0A0S3UCL0_9CYAN1.060e-16958.05tRNA-2-methylthio-N(6)-dimethylallyladenosine synt... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006638Elp3/MiaB/NifBSMARTSM00729MiaBcoord: 272..490
e-value: 1.5E-52
score: 190.6
IPR005839MethylthiotransferaseTIGRFAMTIGR00089TIGR00089coord: 131..560
e-value: 4.3E-141
score: 468.5
IPR005839MethylthiotransferaseSFLDSFLDG01061methylthiotransferasecoord: 129..563
e-value: 0.0
score: 510.2
IPR023404Radical SAM, alpha/beta horseshoeGENE3D3.80.30.20tm_1862 like domaincoord: 270..504
e-value: 3.1E-79
score: 267.8
NoneNo IPR availableTIGRFAMTIGR01574TIGR01574coord: 131..562
e-value: 4.1E-136
score: 452.4
NoneNo IPR availablePIRSRPIRSR000167-1PIRSR000167-1coord: 363..505
e-value: 3.1E-5
score: 21.2
NoneNo IPR availableSFLDSFLDG01082B12-binding_domain_containingcoord: 199..451
e-value: 6.2E-23
score: 75.8
NoneNo IPR availablePANTHERPTHR43020CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1coord: 119..565
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 14..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..567
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..13
NoneNo IPR availableCDDcd01335Radical_SAMcoord: 276..441
e-value: 3.72309E-6
score: 46.1726
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 263..495
IPR002792TRAM domainPFAMPF01938TRAMcoord: 501..562
e-value: 2.3E-11
score: 43.5
IPR002792TRAM domainPROSITEPS50926TRAMcoord: 501..564
score: 15.56009
IPR013848Methylthiotransferase, N-terminalPFAMPF00919UPF0004coord: 131..230
e-value: 2.7E-28
score: 97.9
IPR013848Methylthiotransferase, N-terminalPROSITEPS51449MTTASE_Ncoord: 129..246
score: 32.822605
IPR038135Methylthiotransferase, N-terminal domain superfamilyGENE3D3.40.50.12160coord: 130..261
e-value: 4.8E-33
score: 115.6
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 277..447
e-value: 7.8E-26
score: 91.4
IPR007197Radical SAMPROSITEPS51918RADICAL_SAMcoord: 268..499
score: 33.345757
IPR006463tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaBSFLDSFLDF00273(dimethylallyl)adenosine_tRNAcoord: 129..563
e-value: 0.0
score: 510.2
IPR020612Methylthiotransferase, conserved sitePROSITEPS01278MTTASE_RADICALcoord: 276..296

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1223_length_12420_cov_4.813286contigNODE_1223_length_12420_cov_4.813286:7025..8728 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1858.t1Gcaud1858.t1Gracilaria caudata M_176_S67 malemRNANODE_1223_length_12420_cov_4.813286 7025..8728 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1858.t1 ID=Gcaud1858.t1|Name=Gcaud1858.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=568bp
MAYFIENCVRSKRATLAHLAALLSICDGTRTSEGDTGWISVQTKMQPKNL
NPSATNEEYINDELLAKAITSRPGSLQITKLSYGWEIFIVTDVRHAVTAT
VLGATREKGFSVNPNMRRTSKRKPKIIPKSFFIQTFGCQMNESDSERMAA
ELESEGYHKVDDPNKSALYLLNTCALRDHAEQKVYSYLGSHAQRKWDAPQ
EVTLVVAGCVAQQEGEALLSRVPEIDIVMGPQYANRLADVINLYLTSKAQ
VVAVEPIHIHEDISKPKRSSKLTAWVSVIYGCLERCTYCVVPNTRGLEQS
RSMASIRKEIETLAAEGYREVVLLGQNVDAYGRDLFPRVTFSELLRYVHD
VDGIERIRFTTGHPRYISDNLIDTVFELPKVMEHFHIPPQSGDSSILKAM
KRGYTRERYIQIARKIRDKMPDASICADMIVGFPGETDEAFQNSVSLADE
VVFDANMVRAYSARPNTSAASLPDQLSEQIKMERLQIMNKNMKHHAEIRS
RRYLGRCVEVLVDGVNPKRANEVSGRERTNRVVFCEGGSELIGKVIEVRV
QEAYPFSLRGKITRIIK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006638Elp3/MiaB/NifB
IPR005839Methylthiotransferase
IPR023404rSAM_horseshoe
IPR002792TRAM_dom
IPR013848Methylthiotransferase_N
IPR038135Methylthiotransferase_N_sf
IPR007197rSAM
IPR006463MiaB_methiolase
IPR020612Methylthiotransferase_CS