Gcaud1850.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1850.t1
Unique NameGcaud1850.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length193
Homology
BLAST of Gcaud1850.t1 vs. uniprot
Match: A0A2V3IR15_9FLOR (Ribosomal protein L19 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IR15_9FLOR)

HSP 1 Score: 335 bits (859), Expect = 1.320e-115
Identity = 179/192 (93.23%), Postives = 187/192 (97.40%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLRCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKALAEQFEARRLKNRAARERKAARLEERRKQEGVARVAAS 192
            MVSLKLQKRLAASVLRCG+NKVWLDPNEIQEIA+ANSRQNIRKLVSDGL+IKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLL KYREAKKIDRYLYHELYLRCKGNVFKNRRVLM+SIHKAKAEKAR+KALAEQ+EARRLK+RAAR+RKAARLEERRKQ G AR  AS
Sbjct:    1 MVSLKLQKRLAASVLRCGRNKVWLDPNEIQEIAVANSRQNIRKLVSDGLIIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLCKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMDSIHKAKAEKARAKALAEQYEARRLKSRAARDRKAARLEERRKQAGTARPTAS 192          
BLAST of Gcaud1850.t1 vs. uniprot
Match: R7QQ26_CHOCR (Ribosomal protein L19 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ26_CHOCR)

HSP 1 Score: 314 bits (804), Expect = 3.290e-107
Identity = 169/185 (91.35%), Postives = 176/185 (95.14%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLRCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKALAEQFEARRLKNRAARERKAARLEERRKQEG 185
            MVSLKLQKRLAASVL CGKNKVWLDPNE+ EI++ANSRQNIRKLVSDG VIKKPVTVHSRARVR   AAK KGRH GYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARS+ALA+QFEARR+KN+AARERKAARLEERRK EG
Sbjct:    1 MVSLKLQKRLAASVLGCGKNKVWLDPNEVNEISMANSRQNIRKLVSDGFVIKKPVTVHSRARVRMNQAAKRKGRHSGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSQALADQFEARRIKNKAARERKAARLEERRKVEG 185          
BLAST of Gcaud1850.t1 vs. uniprot
Match: A0A1X6NS04_PORUM (Ribosomal protein L19 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NS04_PORUM)

HSP 1 Score: 287 bits (735), Expect = 1.500e-96
Identity = 153/188 (81.38%), Postives = 169/188 (89.89%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLRCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKALAEQFEARRLKNRAARERKAARLEERRKQEGVAR 188
            M SLKLQKRLAASVLRCG+ KVWLDPNE+Q I +ANSRQNIRKLV DG VI+KP TVHSRARVRK + AK KGRH G GKRLGTRDARLPQKV WMRRQRVLRN+LRKYREAKKID++LYHELY+RCKGNVFKN+RVLME IHKAKAEKAR K LA+QFEARR+KN+AARERKA RL+ERR++E  AR
Sbjct:    1 MTSLKLQKRLAASVLRCGQRKVWLDPNEVQVITLANSRQNIRKLVKDGFVIRKPETVHSRARVRKYNEAKRKGRHMGTGKRLGTRDARLPQKVQWMRRQRVLRNMLRKYREAKKIDKHLYHELYVRCKGNVFKNKRVLMEYIHKAKAEKARDKTLADQFEARRIKNKAARERKALRLDERREEEIAAR 188          
BLAST of Gcaud1850.t1 vs. uniprot
Match: I1PB45_ORYGL (Ribosomal protein L19 n=9 Tax=Petrosaviidae TaxID=1437197 RepID=I1PB45_ORYGL)

HSP 1 Score: 263 bits (673), Expect = 2.830e-87
Identity = 133/180 (73.89%), Postives = 159/180 (88.33%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLRCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKALAEQFEARRLKNRAARERKAARLEER 180
            MVSLKLQKRLAASVL+CGK KVWLDPNE+ EI++ANSRQNIRKLV DG +IKKP  +HSR+R R+ H AK KGRH GYGKR GTR+ARLP K+LWMRR RVLR LLRKYREAKKID+++YH++Y++ KGN+FKN+RVLMESIHK+KAEKAR K L++QFEA+R K++A+RERK AR EER
Sbjct:    1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSRSRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKIARREER 180          
BLAST of Gcaud1850.t1 vs. uniprot
Match: A0A804NH76_MAIZE (Ribosomal protein L19 n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A804NH76_MAIZE)

HSP 1 Score: 263 bits (671), Expect = 4.360e-87
Identity = 133/180 (73.89%), Postives = 159/180 (88.33%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLRCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKALAEQFEARRLKNRAARERKAARLEER 180
            MVSLKLQKRLAASVL+CGK KVWLDPNE+ EI++ANSRQNIRKLV DG +I+KP  VHSR+R R+ H AK KGRH GYGKR GTR+ARLP K+LWMRR RVLR LLRKYREAKKID+++YH++Y++ KGN+FKN+RVLMESIHK+KAEKAR K L++QFEA+R K++A+RERK AR EER
Sbjct:    1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIRKPQKVHSRSRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKIARREER 180          
BLAST of Gcaud1850.t1 vs. uniprot
Match: A0A6P6W0Z3_COFAR (Ribosomal protein L19 n=20 Tax=Pentapetalae TaxID=1437201 RepID=A0A6P6W0Z3_COFAR)

HSP 1 Score: 263 bits (673), Expect = 4.550e-87
Identity = 133/180 (73.89%), Postives = 159/180 (88.33%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLRCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKALAEQFEARRLKNRAARERKAARLEER 180
            MVSLKLQKRLAASVL+CGK KVWLDPNE+ EI++ANSRQNIRKLV DG +I+KP  +HSR+R R++  AK KGRH GYGKR GTR+ARLP K+LWMRR RVLR LLRKYREAKKID+++YH++Y++ KGNVFKN+RVLMESIHK+KAEKAR K L++QFEA+R KN+A+RERK AR EER
Sbjct:    1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKMARREER 180          
BLAST of Gcaud1850.t1 vs. uniprot
Match: I1GR71_BRADI (Ribosomal protein L19 n=72 Tax=Poaceae TaxID=4479 RepID=I1GR71_BRADI)

HSP 1 Score: 263 bits (672), Expect = 6.910e-87
Identity = 133/180 (73.89%), Postives = 159/180 (88.33%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLRCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKALAEQFEARRLKNRAARERKAARLEER 180
            MVSLKLQKRLA+SVL+CGK KVWLDPNE+ EI++ANSRQNIRKLV DG +IKKP  +HSR+R R+ H AK KGRH GYGKR GTR+ARLP K+LWMRR RVLR LLRKYREAKKID+++YH++YL+ KGN+FKN+RVLMESIHK+KAEKAR K L++QFEA+R K++A+RERK AR EER
Sbjct:    1 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPQKIHSRSRARRAHEAKQKGRHSGYGKRRGTREARLPTKILWMRRMRVLRRLLRKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKIARREER 180          
BLAST of Gcaud1850.t1 vs. uniprot
Match: A0A7N0UKL0_KALFE (Ribosomal protein L19 n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UKL0_KALFE)

HSP 1 Score: 263 bits (672), Expect = 7.150e-87
Identity = 134/180 (74.44%), Postives = 159/180 (88.33%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLRCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKALAEQFEARRLKNRAARERKAARLEER 180
            MVSLKLQKRLA+SVL CGK KVWLDPNE+ EI++ANSRQNIRKLV DG +I+KP  +HSR+R R+++ AK KGRH GYGKR GTR+ARLP KVLWMRR RVLR LLRKYREAKKID+++YH++Y++ KGNVFKN+RVLMESIHK+KAEKAR K LA+QFEA+R KN+A+RERK AR EER
Sbjct:    1 MVSLKLQKRLASSVLSCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMNEAKRKGRHSGYGKRRGTREARLPTKVLWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLADQFEAKRAKNKASRERKNARREER 180          
BLAST of Gcaud1850.t1 vs. uniprot
Match: A0A2P2L858_RHIMU (Ribosomal protein L19 n=4 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2L858_RHIMU)

HSP 1 Score: 263 bits (672), Expect = 7.390e-87
Identity = 134/180 (74.44%), Postives = 158/180 (87.78%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLRCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKALAEQFEARRLKNRAARERKAARLEER 180
            MVSLKLQKRLAASVL+CGK KVWLDPNE+ EI++ANSRQNIRKLV DG +I+KP  +HSR+R R++  AK KGRH GYGKR GTR+ARLP KVLWMRR RVLR LLRKYREAKKID+++YH++Y+R KGNVFKN+RVLMESIHK+KAEK R K L++QFEA+R KN+A+RERK AR EER
Sbjct:    1 MVSLKLQKRLAASVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLRKYREAKKIDKHMYHDMYMRVKGNVFKNKRVLMESIHKSKAEKQREKTLSDQFEAKRAKNKASRERKMARREER 180          
BLAST of Gcaud1850.t1 vs. uniprot
Match: A0A2R6PDY5_ACTCC (Ribosomal protein L19 n=6 Tax=asterids TaxID=71274 RepID=A0A2R6PDY5_ACTCC)

HSP 1 Score: 263 bits (671), Expect = 1.120e-86
Identity = 135/190 (71.05%), Postives = 164/190 (86.32%), Query Frame = 0
Query:    1 MVSLKLQKRLAASVLRCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLVIKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQRVLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKARSKALAEQFEARRLKNRAARERKAARLEERRKQEGVARVA 190
            MVSLKLQKRL+ASVL+CG+ KVWLDPNE+ EI++ANSRQNIRKLV DG +IKKP  +HSR+R R++  AK KGRH GYGKR GTR+ARLP K+LWMRR RVLR LLRKYRE+KKID+++YH++Y++ KGNVFKN+RVLMESIHK+KAEKAR K L++QFEA+R KN+A+RERK AR EER  Q  V +VA
Sbjct:    1 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIKKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKFARREERLAQGPVEKVA 190          
The following BLAST results are available for this feature:
BLAST of Gcaud1850.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IR15_9FLOR1.320e-11593.23Ribosomal protein L19 n=1 Tax=Gracilariopsis chord... [more]
R7QQ26_CHOCR3.290e-10791.35Ribosomal protein L19 n=1 Tax=Chondrus crispus Tax... [more]
A0A1X6NS04_PORUM1.500e-9681.38Ribosomal protein L19 n=1 Tax=Porphyra umbilicalis... [more]
I1PB45_ORYGL2.830e-8773.89Ribosomal protein L19 n=9 Tax=Petrosaviidae TaxID=... [more]
A0A804NH76_MAIZE4.360e-8773.89Ribosomal protein L19 n=2 Tax=Mesangiospermae TaxI... [more]
A0A6P6W0Z3_COFAR4.550e-8773.89Ribosomal protein L19 n=20 Tax=Pentapetalae TaxID=... [more]
I1GR71_BRADI6.910e-8773.89Ribosomal protein L19 n=72 Tax=Poaceae TaxID=4479 ... [more]
A0A7N0UKL0_KALFE7.150e-8774.44Ribosomal protein L19 n=1 Tax=Kalanchoe fedtschenk... [more]
A0A2P2L858_RHIMU7.390e-8774.44Ribosomal protein L19 n=4 Tax=Rhizophora mucronata... [more]
A0A2R6PDY5_ACTCC1.120e-8671.05Ribosomal protein L19 n=6 Tax=asterids TaxID=71274... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 142..181
NoneNo IPR availableGENE3D1.10.1200.240coord: 57..190
e-value: 2.7E-55
score: 188.1
NoneNo IPR availablePANTHERPTHR10722:SF560S RIBOSOMAL PROTEIN L19-2coord: 1..185
IPR000196Ribosomal protein L19/L19eSMARTSM01416Ribosomal_L19e_2coord: 3..146
e-value: 6.9E-91
score: 317.9
IPR000196Ribosomal protein L19/L19ePFAMPF01280Ribosomal_L19ecoord: 4..146
e-value: 3.1E-60
score: 202.4
IPR015972Ribosomal protein L19/L19e, domain 1GENE3D1.10.1650.10coord: 1..56
e-value: 1.9E-29
score: 103.3
IPR03954760S ribosomal protein L19PANTHERPTHR1072260S RIBOSOMAL PROTEIN L19coord: 1..185
IPR023638Ribosomal protein L19/L19e conserved sitePROSITEPS00526RIBOSOMAL_L19Ecoord: 7..26
IPR033935Ribosomal protein L19, eukaryoticCDDcd01417Ribosomal_L19e_Ecoord: 4..166
e-value: 2.09101E-86
score: 249.575
IPR035970Ribosomal protein L19/L19e superfamilySUPERFAMILY48140Ribosomal protein L19 (L19e)coord: 3..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_207_length_37223_cov_4.468356contigNODE_207_length_37223_cov_4.468356:28919..29597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1850.t1Gcaud1850.t1Gracilaria caudata M_176_S67 malemRNANODE_207_length_37223_cov_4.468356 28919..29597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1850.t1 ID=Gcaud1850.t1|Name=Gcaud1850.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=193bp
MVSLKLQKRLAASVLRCGKNKVWLDPNEIQEIAIANSRQNIRKLVSDGLV
IKKPVTVHSRARVRKLHAAKSKGRHCGYGKRLGTRDARLPQKVLWMRRQR
VLRNLLRKYREAKKIDRYLYHELYLRCKGNVFKNRRVLMESIHKAKAEKA
RSKALAEQFEARRLKNRAARERKAARLEERRKQEGVARVAAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000196Ribosomal_L19/L19e
IPR015972Ribosomal_L19/L19e_dom1
IPR039547RPL19
IPR023638Ribosomal_L19/L19e_CS
IPR033935Ribosomal_L19_euka
IPR03597060S_ribosomal_L19/L19e_sf