Gcaud1835.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1835.t1
Unique NameGcaud1835.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length125
Homology
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BLAST of Gcaud1835.t1 vs. uniprot
Match: A0A2V3IIY6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIY6_9FLOR)

HSP 1 Score: 172 bits (436), Expect = 2.010e-52
Identity = 82/116 (70.69%), Postives = 96/116 (82.76%), Query Frame = 0 
Query:    2 DKNGEEVYRAIFDHSDKTMRIRDASTADIVVTARQRGHLFNILQVFNGDGFYGKPFIEVCGALDYELTESETGRVLAKVEQLVKWSEPSACTVHVAADLNVPLMLLLITSINHIAE 117
            DK+GEE+YR     SD TMRIRDA T DIV+T RQRG LF+I+QVFNGDGFYGKPFIEVC ALDY++TE+E GR+LA VEQ+V+WSEPS C+VH+A  LN PL+LLLI SINH  E
Sbjct:   74 DKHGEELYRTAVSSSDNTMRIRDARTDDIVITTRQRGQLFSIVQVFNGDGFYGKPFIEVCAALDYKVTEAEGGRLLATVEQVVRWSEPSHCSVHIATGLNAPLLLLLIASINHTVE 189
[Close]
BLAST of Gcaud1835.t1 vs. uniprot
Match: A0A2V3IMC6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMC6_9FLOR)

HSP 1 Score: 110 bits (276), Expect = 1.450e-28
Identity = 54/112 (48.21%), Postives = 80/112 (71.43%), Query Frame = 0 
Query:    6 EEVYRAIFDHSDKTMRIRDASTADIVVTARQRGHLFNILQVFNGDGFYGKPFIEVCGALDYELTESETGRVLAKVEQLVKWSEPSACTVHVAADLNVPLMLLLITSINHIAE 117
            E +Y+A+ D +   ++I DA +  +++T RQ+GHLF I QVF GD    +P++EVC ALDYEL E ETGRVLA V+++V+++E + C V V   LN P++LLLI++IN + E
Sbjct:   47 ELLYKAVIDITLNVVQIVDAKSEQVLLTTRQKGHLFPITQVFTGDNTAVEPYVEVCAALDYELCERETGRVLAVVDRVVRYAERAHCNVCVDTGLNAPVLLLLISTINDVVE 158
The following BLAST results are available for this feature:
BLAST of Gcaud1835.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IIY6_9FLOR2.010e-5270.69Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IMC6_9FLOR1.450e-2848.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_23_length_76035_cov_4.613123contigNODE_23_length_76035_cov_4.613123:67466..67840 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1835.t1Gcaud1835.t1Gracilaria caudata M_176_S67 malemRNANODE_23_length_76035_cov_4.613123 67466..67840 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1835.t1 ID=Gcaud1835.t1|Name=Gcaud1835.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=125bp
MDKNGEEVYRAIFDHSDKTMRIRDASTADIVVTARQRGHLFNILQVFNGD
GFYGKPFIEVCGALDYELTESETGRVLAKVEQLVKWSEPSACTVHVAADL
NVPLMLLLITSINHIAESSASASA*
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