Gcaud1828.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1828.t1
Unique NameGcaud1828.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length463
Homology
BLAST of Gcaud1828.t1 vs. uniprot
Match: A0A2V3ISE6_9FLOR (U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISE6_9FLOR)

HSP 1 Score: 629 bits (1622), Expect = 1.890e-222
Identity = 347/452 (76.77%), Postives = 393/452 (86.95%), Query Frame = 0
Query:    1 MDLEILPNTALESARAEHAQKLKQLQQRRIARSISLPTDDQQVKLALRSRGHPICLFGEDAYDRRERLRAVMAEAGVTSLAQPQNENAVVAQKQDARREEFYTEGTQQLRDLRVQVAHASLKAAAKRLENERNKTHTIKRWERDELETMHRVRESALIASQGGGVRPFTAICYCETADGDLIVTGDWGGNVAVWKEHEDGISQLSCAAFHQERVSITRFYKGILTTAAADSFAVVSEYREGKFVQTVKLAGHNGRVADVRVNPVRTSLVATAGFDGDVRLFDRGKPLLQQETGHDVVYRLAFHEDGSXXXXXXXXXXXXXXDMRSGRAVMTFESAHVGDVTALEFCGGMPWISSSXXXXXXXXXXXXXXXXXRTIAAHAKMVSALAIDRGFVMFSAGFDRCVKAWALHRACGLVACWSGFDDKIMALDCSGDGSRVVAACYDKTWRVWGCER 452
            M++EILPN++LE+AR E AQKL +LQQRR+ARSI++P DDQ+V+LALRSRGHP+CLFGEDAYDRRERLRA++AEAGVT L   + E     ++Q+ R EEFYTEGTQQLRDLR Q+AHASLKAA  RL  ER+K   +K+WERDEL TM  VR+++LIASQGGG RPFTAI YC+T +GDLIVTGDWGGNVAVWKE +  ISQ+S    H+ERVSITRF+KGIL +A ADS AVVSEYR+  FV+T +L GH GRVADVRVNPVR SLVATAGFDGDVRLFD G+ LLQQETGHDVV+RL FHEDGSXXXXXXXXXXXXXXDMRSGRAVMTF  AHVGDVTALEFC GMPW++SSXXXXXXXXXXXXXXXXX  +AAH+KMV+ LA+DRGFVMFSAGFDRCVKAWALHRACGLVA W+GF DKIMA+DCSGDG RVVAACYDKTWRVWG +R
Sbjct:   39 MEVEILPNSSLEAAREEQAQKLHKLQQRRLARSIAVPADDQEVRLALRSRGHPVCLFGEDAYDRRERLRALLAEAGVTRLETEEEEQPHAKKEQEVRTEEFYTEGTQQLRDLRTQIAHASLKAAHTRLSRERSKRECMKQWERDELATMQTVRKNSLIASQGGGARPFTAISYCDTEEGDLIVTGDWGGNVAVWKERDGCISQVSKLKGHEERVSITRFHKGILVSAGADSVAVVSEYRDSAFVETARLTGHVGRVADVRVNPVRRSLVATAGFDGDVRLFDTGRALLQQETGHDVVFRLGFHEDGSXXXXXXXXXXXXXXDMRSGRAVMTFAGAHVGDVTALEFCKGMPWMASSXXXXXXXXXXXXXXXXXXXVAAHSKMVAGLAMDRGFVMFSAGFDRCVKAWALHRACGLVASWTGFVDKIMAIDCSGDGRRVVAACYDKTWRVWGSDR 490          
BLAST of Gcaud1828.t1 vs. uniprot
Match: R7QQA0_CHOCR (U4/U6 small nuclear ribonucleoprotein Prp4, putative, WD40-repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQA0_CHOCR)

HSP 1 Score: 333 bits (855), Expect = 7.380e-107
Identity = 217/451 (48.12%), Postives = 287/451 (63.64%), Query Frame = 0
Query:    3 LEILPNTALESARAEHAQKLKQLQQRRIARSISLPTDDQQVKLALRSRGHPICLFGEDAYDRRERLRAVMAEAGVTSLAQ-PQNENAVVAQKQDARREEFYTEGTQQLRDLRVQVAHASLKAAAKRLENERNKTHTIKRWERDELETMHRVRESALIASQGGGVRPFTAICYCETADGDLIVTGDWGGNVAVWKEHEDGISQLSCAAFHQERVS---ITRFYKGILTTAAADSFAVVSEY-REGKFVQTVKLAGHNGRVADVRVNPVRTSLVATAGFDGDVRLFDRGKPLLQQETGHDVVYRLAFHEDGSXXXXXXXXXXXXXXDMRSGRAVMTFESAHVGDVTALEFCGGMPWISSSXXXXXXXXXXXXXXXXXRTIAAHAKMVSALAIDRGFVMFSAGFDRCVKAWALHRACGLVACWSGFDDKIMALDCSGDGSRVVAACYDKTWRVW 448
            +EILPN AL +AR     KL + +  R+AR++ +PT D  V+  LR+RG P+CLFGED +DRRERLR  +A   +T   + P     VVA+ ++ RREE+ TEG  +LR +R ++   S++ A +RL  ER         ER+E   +  VR   ++ASQ GG RP +AIC  E      +VTG WGG V VW E E    ++   A H+ RVS   + R +  +L TAAAD  A VS    EGKF +  +L GH GRV DV+++P R  LV + GFDG+VR++D G+ +++QE+GH+ VYR+ FH DG  XXXXXXXXXXXXXD+RSGRAVMT   AH G V  LEFC         XXXXXXXXXXXXXXX  +T+AAH  +VSA+    G V+FS  FDR VK W + R   L+A  +GF++K+  +DCS  G  +VAACYDKTW++W
Sbjct:    6 MEILPNRALAAAREAREAKLAKFEAERVARAVLVPTSDATVRENLRARGMPVCLFGEDGHDRRERLRGALAHEKLTGQERVPTGGGEVVAEVEELRREEYLTEGGAELRKVRAELVEMSVRKAGERLARERGGVGRRAAREREE-RAVRCVRRMEVVASQVGGERPLSAICLFEAGGQRRVVTGGWGGGVRVW-EGEGRCEEVQRLALHEGRVSAVCVPREWSDVLLTAAADGCAAVSARGEEGKFAERARLKGHRGRVGDVKMHPGRKGLVVSGGFDGEVRVWDDGREVMRQESGHEAVYRVGFHPDGGLXXXXXXXXXXXXXDLRSGRAVMTMGKAHAGGVLGLEFCAXXXXXXXXXXXXXXXXXXXXXXXCEKTVAAHRGLVSAVRCG-GDVVFSGSFDRSVKCWGVKRGWSLIAAVTGFEEKVTGVDCSAGGEVLVAACYDKTWKMW 453          
BLAST of Gcaud1828.t1 vs. uniprot
Match: A0A830HE90_9CHLO (SFM domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HE90_9CHLO)

HSP 1 Score: 142 bits (358), Expect = 9.790e-34
Identity = 112/322 (34.78%), Postives = 165/322 (51.24%), Query Frame = 0
Query:    8 NTALESARAEHAQKLKQLQQRRIARSISLPTDDQQVKLALRSRGHPICLFGEDAYDRRERLRAVMAE-AGVTSLAQPQNENAV-------VAQKQDARREEFYTEGTQQLRDLRVQVAHASLKAAAKRLENERNKTHTIKRWERDELETMHRVRESALIASQGGGVRPFTAICYCETADGD-LIVTGDWGGNVAVWKEH-----------EDGISQLSCAAFHQERVSITRFYKGILTTAAADSFAVVSEYREGKFVQTVKLAGHNGRVADVRVNPVRTSLVATAGFDGDVRLFD--RGKPLLQQETGHDVVYRLAFHEDGS 307
            N ALE    E A + +    R    S ++P  D  V++ALRS G PI LFGE   +RR RLRA++AE A +T+    ++  AV         ++ D  RE FYTEGT+ L+  R+ +   S+  AAKRL NER  T    +  R+E+ +  R    A+ AS+    RP  A    ET  GD ++ T  WGG++ +W+             ED ++ +        R   T   +GI+ T+AAD  A + +  +G  ++  +L GH GR+  ++ NP     +ATAGFD   RL+D   G+ LL QE     VY +A+H DG+
Sbjct:   16 NRALE----EQASRERAAAMRARLSSTAVPAADADVRVALRSIGEPITLFGEGPAERRNRLRALVAEGAELTATVATEDTMAVEPAEDDEAGEEVDVGRETFYTEGTETLKRARIDLCEDSIARAAKRLANERELTRESVQSAREEVAS--RCAALAMEASELADARPVAACSLRETPAGDAMLATASWGGSLKLWRLSDNKCLGSTEVCEDRLTGVDLHPSATVRGEDTPSAEGIVATSAADGVARLHKCEDGSLLR--ELPGHTGRIGRLKFNPCNGRWLATAGFDATWRLWDCDTGEELLLQEGHSRSVYTVAWHGDGA 329          
BLAST of Gcaud1828.t1 vs. uniprot
Match: A0A7S3EA91_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EA91_9RHOD)

HSP 1 Score: 121 bits (303), Expect = 2.850e-26
Identity = 93/293 (31.74%), Postives = 146/293 (49.83%), Query Frame = 0
Query:    8 NTALESARAEHAQKLKQLQQRRIARSISLPTDDQQVKLALRSRGHPICLFGEDAYDRRERLRAVMAEAGVTSLAQPQNENAVVAQKQDARREEFYTEGTQQLRDLRVQVAHASLKAAAKRLENERNKTHTIKRWERDELETMHRVRESALIASQGGGVRPFTAICYCETA-DGDLIVTGDWGGNVAVWKEHEDGISQLSCAAFHQERVSITRFY---KGILTTAAADSFAVVSEYREGKFVQTVKLAGHNGRVADVRVNPVRTSLVATAGFDGDVRLFD--RGKPLLQQETGH 294
            + A E AR E   +   L ++R AR++ LPT D  V+L LR+RG P+CLFGEDA+DRRERLRA++ E   +  +  Q E      K +   EEF+TEG ++L+  R+++   SL  +  RL   R +  +++ +  +  E    ++  AL++SQ G  RP  A  +   A D   I TG W G V +W +   G   L     H ER+S   F+   +G++ + +AD    + + +  +  +   +                  L+ ++ FD   RL+D   G  LL QE GH
Sbjct:   34 DNAAEDARKEQEHRQGLLDKQREARALVLPTADADVRLELRNRGEPVCLFGEDAHDRRERLRALVLEEKESKPSDEQTEAKEEENKVEPAPEEFFTEGLEELKQARLKILKKSLHKSRDRLVESRKRIRSVE-FREEGNEVYASMQNVALVSSQIGDSRPLAACAFSSGAQDPSTIATGSWSGLVKLW-DANSGAPPLVLKG-HTERISHLAFHPSKQGVIASCSADKTVHLWDTKREERDRVTAIYRDXXXXXXXXXXXXDGELLGSSSFDTTWRLYDLETGTCLLLQE-GH 322          
BLAST of Gcaud1828.t1 vs. uniprot
Match: A0A2Q4QT46_CAEJA (SFM domain-containing protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2Q4QT46_CAEJA)

HSP 1 Score: 120 bits (300), Expect = 8.540e-26
Identity = 101/289 (34.95%), Postives = 142/289 (49.13%), Query Frame = 0
Query:   19 AQKLKQLQQRRIARSISLPTDDQQVKLALRSRGHPICLFGEDAYDRRERLRAVMAEAGVTSLAQPQNENAVVAQKQDARREEFYTEGTQQLRDLRVQVAHASLKAAAKRLENERNKTHTIKRWERDELETMH-RVRESALIASQGGGVRPFTAICYCE-TADGDLIVTGDWGGNVAVWKEHEDGISQLSCAAFHQERVSITRFYKGILTTAAADSFAVVSEYREGKFVQTVKLAGHNGRVADVRVNPVRTSLVATAGFDGDVRLFDRGK--PLLQQETGHDVVYRLAFH 303
            A+ L + ++R+ AR+++LPTDD QVKL LR+   PI LFGEDA DRRERLRA+++      +A   + + V A K D     +Y  G  +LR+ RVQ+A  SL+ A  RLE  R +       +    +  H R+++  L ASQ    RP   + +CE +AD + IVT  W G VAVWK  E       CA   QE           +  A   S A  + +  G FVQ                N   T  VA+ G+DG V L+   +  P+ + E     V ++AFH
Sbjct:   57 AEMLAEFERRKRARTLTLPTDDVQVKLKLRALNQPIILFGEDALDRRERLRALLSTMSEDEIAAVLHTDEVNADKNDEETVTWYHRGPAELRNARVQMADFSLRKAKLRLEKAREEAARPAHEKALIRQEAHKRIQQVNLYASQVADTRP---VAFCEFSADSEHIVTAGWSGAVAVWKRDE-------CA---QE-----------IKFAGHSSQAGCARFHPGAFVQ----------------NQPNTLNVASGGYDGTVLLWSLSQETPIAELEKHPQRVAKVAFH 305          
BLAST of Gcaud1828.t1 vs. uniprot
Match: Q22LQ2_TETTS (U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q22LQ2_TETTS)

HSP 1 Score: 117 bits (292), Expect = 1.410e-24
Identity = 118/470 (25.11%), Postives = 203/470 (43.19%), Query Frame = 0
Query:    6 LPNTALESARAEHAQKLKQLQQRRIARSISLPTDDQQVKLALRSRGHPICLFGEDAYDRRERLRAVMAEAGVTSLAQPQNENAVVAQKQDARREEFYTEGTQQLRDLRVQVAHASLKAAAKRLENERNKTHTIKRWERDELETMHRVRESALIASQGGGVRPFTAICYCETADG------------DLIVTGDWGGNVAVWK--------EHEDGISQLSCAAFHQERVSITRFYKGILTTAAADS-FAVVSEYREGKFVQTVKLAGHNGRVADVRVNPVRTSLVATAGFDGDVRLFD--RGKPLLQQETGHDV-VYRLAFHEDGSXXXXXXXXXXXXXXDMRSGRAVMTFESAHVGDVTALEFC-GGMPWISSSXXXXXXXXXXXXXXXXXRTIAAHAKMVSALAIDRGFVMF--SAGFDRCVKAWALHRACGLVACWSGFDDKIMALDCSGDGSRVVAACYDKTWRVW 448
            L   ALE  R  H + +++L+ ++ A ++ +PT+D++VK  LR  GHPIC FGE+  DRRERL+ V AE  +     PQ       QKQ+   E FY  G ++L+++R ++A  SL  +++R+   +     + R E D L     V E   I+S    ++    +C  + AD             DL+ T    G   +W           E  +S++    ++ E  S++    G L T ++D+   + +     +  +++ L+GH  RV  +  +     L +T+  D   R +D  R K +  Q TGH   VY  A H DGS              D+R+G+ ++ F   HV  + A +F   G  +++ S                  T+  H K++S +   +    +  S  +D  +K W   +   L   +   + KI ++              D+ W +W
Sbjct:   88 LSEHALEEKR-RHDENMRKLELQKKASTMIVPTNDKEVKYRLRQLGHPICYFGENNADRRERLKKVQAEYIMEHGDLPQFIKLEEKQKQNDENEHFYYPGIKELKEIREEIATYSLLKSSRRVYKSK-----VGRMEEDPL-----VEEKKQISSLNRAMK--FDVCVSQFADSSIVLRGAFSPECDLLATAGGSGVSKIWNIPNSDLKCRLEGHLSKVHDIVWNPETGSMSHNSFGHLATGSSDTNIRLWTMDPAAELQKSIVLSGHEDRVNRLSFHQTGKYLFSTS-HDMTWRFWDIERQKEIYVQ-TGHTKGVYANALHPDGSLIFTGDLQGYGMIWDLRTGKGILPFSGYHVKGILAADFSENGFQFVTGSEDNTLRVFDIRRRACM-HTLPGHLKLISDVKFQKNGSNYFVSVSYDNTLKLWNA-KDFSLAKTYKSHESKITSVTLDQSQKYFATTSLDRKWMLW 540          
BLAST of Gcaud1828.t1 vs. uniprot
Match: A0A3P7KGT8_STRVU (SFM domain-containing protein (Fragment) n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7KGT8_STRVU)

HSP 1 Score: 113 bits (283), Expect = 9.440e-24
Identity = 96/289 (33.22%), Postives = 139/289 (48.10%), Query Frame = 0
Query:   19 AQKLKQLQQRRIARSISLPTDDQQVKLALRSRGHPICLFGEDAYDRRERLRAVMAEAGVTSLAQPQNENAVVAQKQDARREEFYTEGTQQLRDLRVQVAHASLKAAAKRLENERNKTHTIKRWERDELETMHR-VRESALIASQGGGVRPFTAICYCE-TADGDLIVTGDWGGNVAVWKEHEDGISQLSCAAFHQERVSITRFYKGILTTAAADSFAVVSEYREGKF----VQTVKLAG----HNGRVADVRVNPVRTSLVATAGFDGDVRLFDRGKPLLQQETGHDVV 297
            A+ L + ++RR AR+++LPTDD QVKL LR    PICLFGED  DRRERLRA+++      +A   +      +K D     +Y  G   LR  RV +A  SL+ A +RL   R         +    +  H+ +++  L ASQ    RP   + YCE + D + IVT  W G  +VW+   D   +L     HQ +    RF+     +A + S  V S   +G      + + K  G    H  RV+ +  +P    L ATA +D   R+FD        ETG D++
Sbjct:   67 AELLAEFERRRRARTLTLPTDDVQVKLKLRKLNQPICLFGEDILDRRERLRALLSTMSEDEVAAILHTEEGFVEKPDEETTTWYHRGPMALRAARVAIADFSLRRAKERLARARENAARPPHEKALARQEAHKWIQQLNLHASQVADSRP---VAYCEFSPDSEHIVTAGWSGQPSVWRR--DTCERLIRYTGHQSQNGCARFHPHAYVSADSSSLNVASCAHDGTVYLWSLDSEKPIGELEKHEARVSRLAFHPNGRHL-ATACYDSSWRMFD-------VETGEDLL 342          
BLAST of Gcaud1828.t1 vs. uniprot
Match: A0A0R3Q1J2_ANGCS (SFM domain-containing protein n=3 Tax=Strongylida TaxID=6308 RepID=A0A0R3Q1J2_ANGCS)

HSP 1 Score: 110 bits (276), Expect = 5.340e-23
Identity = 105/357 (29.41%), Postives = 162/357 (45.38%), Query Frame = 0
Query:    3 LEILPNTALESARAEH-AQKLKQLQQRRIARSISLPTDDQQVKLALRSRGHPICLFGEDAYDRRERLRAVMAEAGVTSLAQPQNENAVVAQKQDARREEFYTEGTQQLRDLRVQVAHASLKAAAKRL----ENERNKTHTIKRWERDELETMHRVRESALIASQGGGVRPFTAICYCE-TADGDLIVTGDWGGNVAVWKEHEDGISQLSCAAFHQERVSITRFYKGILTTAAADSFAVVSEYREGKFV--------QTVKLAGHNGRVADVRVNPVRTSLVATAGFDGDVRLFDRGKPLLQQETGHDVVYRLAFHEDGSXXXXXXXXXXXXXXDMRSGRAVMTFESAHVGDVTALEF 345
            +++     ++   ++H A+ L + ++RR AR+++LPTDD QVKL LR    PICLFGED  DRRERLRA+++      +A+  +      +K D     +Y  G   LR  RV +A  SL+ A +RL    EN     H  K   R E      +++  L ASQ    RP   + +CE + D + IVT  W G  +VW+   +   ++     HQ +    RF+     +A      V S   +G              +L  H  RV+ +  +P    L ATA +   +R F        + +  DV    AFH DGS              D+R+GR +M F   H  ++  +++
Sbjct:   22 IQVCERMEVDPIESQHEAELLAEFERRRRARTLTLPTDDVQVKLKLRKLNQPICLFGEDILDRRERLRALLSTMTEDEVAKILHTEEGFVEKPDEETTTWYHRGPMSLRAARVAIADFSLRRAKERLIRARENAARPPHE-KALARQEAHKW--IQQLNLHASQVADSRP---VAFCEFSPDSEHIVTAGWSGQPSVWRR--ETCERMIRYVGHQSQSGCARFHPHAFISADLSELNVASCAHDGTVYLWSLDNEKPLAELEKHEARVSRLAFHPNGRHL-ATAWY---LRFF-------MENSVADV----AFHPDGSVALTGGLDCYGRVWDLRTGRCIM-FLDGHTKELYTVDW 354          
BLAST of Gcaud1828.t1 vs. uniprot
Match: A8XF84_CAEBR (Protein CBR-PRP-4 n=8 Tax=Caenorhabditis TaxID=6237 RepID=A8XF84_CAEBR)

HSP 1 Score: 111 bits (277), Expect = 9.310e-23
Identity = 78/202 (38.61%), Postives = 108/202 (53.47%), Query Frame = 0
Query:   19 AQKLKQLQQRRIARSISLPTDDQQVKLALRSRGHPICLFGEDAYDRRERLRAVMAEAGVTSLAQPQNENAVVAQKQDARREEFYTEGTQQLRDLRVQVAHASLKAAAKRLENERNKTHTIKRWERDELETMHR-VRESALIASQGGGVRPFTAICYCE-TADGDLIVTGDWGGNVAVWKEHEDG--------ISQLSCAAFH 210
            A+ L +  +RR AR+++LPTDD QVKL LR+   PICLFGEDA DRRERLRA+++      +A   + + V A K D     +Y  G  +LR  RV +A  SL+ A  RLE  R         +    +  H+ V++  L +SQ    RP   + +CE ++D   IVT  W G+VAVWK  +           +Q  CA FH
Sbjct:   57 AEMLAEFDRRRRARTLTLPTDDVQVKLKLRALNQPICLFGEDALDRRERLRALLSTMSEDEIAAVLHTDEVNADKADEETVTWYHRGPVELRKARVAIADFSLRKAKLRLEKAREDAAQPAHEKALARQEAHKWVQQINLHSSQVADTRP---VAFCEFSSDSQHIVTAGWSGSVAVWKREQCAQEMKYTGHSAQAGCARFH 255          
BLAST of Gcaud1828.t1 vs. uniprot
Match: A0A250X8P1_9CHLO (SFM domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X8P1_9CHLO)

HSP 1 Score: 109 bits (273), Expect = 2.930e-22
Identity = 91/288 (31.60%), Postives = 144/288 (50.00%), Query Frame = 0
Query:   17 EHAQKLKQLQQRRIARSISLPTDDQQVKLALRSRGHPICLFGEDAYDRRERLRAVMAEAGVTSLAQPQNENAVVAQKQDARREEFYTEGTQQLRDLRVQVAHASLKAAAKRLENERNKTHTIKRWERDELETMHRVRESALIASQGGGVRPFTAICYCE-TADGDLIVTGDWGGNVAVWKEHEDGISQLSCAAFHQER---------VSITRFYKGI-LTTAAADSFAVVSEYREGKFVQTVKLAGHNGRVADVRVNPVRTSLVATAGFDGDVRLFDR--GKPLLQQE 291
            EH  KLK+ + +R  R+  +PTDD +V+  LR  G PI +FGE   DRR+RLR + A+        P     V+ ++     E FYTEG+++L+  R  +A  SL+ AA+R++  + +    +       ET   + E   +A Q   +     +  C+ + DG L+    WGGNV +W  +  G S+   A  H+ER          +I++  + + L T  A+S A +     G+ +Q  +L GH  R+A    +P+   L ATA +D   RL+D   G  LL+QE
Sbjct:   40 EHEAKLKEFELKRKMRTTVIPTDDLKVRQMLRQLGEPITIFGEKEGDRRDRLRKIAAQQDAEFADAPAVGQIVLQEQVAVINELFYTEGSEELKQARTDIALFSLRRAAERIQGVKKRRADPELASEYSSETRSILEEVGSLAQQSSEMGDDRPVSGCQFSPDGQLLAICGWGGNVTLW--NAVGCSKRLSARAHEERCTDVSWHPMANISQSPEAVNLATGCANSTAALLS-ASGQVLQ--RLTGHTDRLARTAFHPMGRHL-ATASYDMTWRLWDVEVGSCLLEQE 321          
The following BLAST results are available for this feature:
BLAST of Gcaud1828.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISE6_9FLOR1.890e-22276.77U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax... [more]
R7QQA0_CHOCR7.380e-10748.12U4/U6 small nuclear ribonucleoprotein Prp4, putati... [more]
A0A830HE90_9CHLO9.790e-3434.78SFM domain-containing protein n=1 Tax=Pycnococcus ... [more]
A0A7S3EA91_9RHOD2.850e-2631.74Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2Q4QT46_CAEJA8.540e-2634.95SFM domain-containing protein n=1 Tax=Caenorhabdit... [more]
Q22LQ2_TETTS1.410e-2425.11U4/U6 small nuclear ribonucleoprotein Prp4 n=1 Tax... [more]
A0A3P7KGT8_STRVU9.440e-2433.22SFM domain-containing protein (Fragment) n=1 Tax=S... [more]
A0A0R3Q1J2_ANGCS5.340e-2329.41SFM domain-containing protein n=3 Tax=Strongylida ... [more]
A8XF84_CAEBR9.310e-2338.61Protein CBR-PRP-4 n=8 Tax=Caenorhabditis TaxID=623... [more]
A0A250X8P1_9CHLO2.930e-2231.60SFM domain-containing protein n=1 Tax=Chlamydomona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..28
NoneNo IPR availablePANTHERPTHR19846:SF0U4/U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP4coord: 13..451
NoneNo IPR availablePANTHERPTHR19846WD40 REPEAT PROTEINcoord: 13..451
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 333..367
score: 8.887423
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 290..327
score: 9.335602
NoneNo IPR availableCDDcd00200WD40coord: 172..448
e-value: 1.36062E-40
score: 145.17
IPR014906Pre-mRNA processing factor 4 (PRP4)-likeSMARTSM00500pr04_2coord: 38..90
e-value: 3.8E-14
score: 63.0
IPR014906Pre-mRNA processing factor 4 (PRP4)-likePFAMPF08799PRP4coord: 43..70
e-value: 5.3E-13
score: 48.3
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 154..195
e-value: 5.7
score: 12.2
coord: 240..282
e-value: 9.4E-5
score: 31.8
coord: 410..449
e-value: 0.0044
score: 26.2
coord: 325..365
e-value: 3.4E-5
score: 33.3
coord: 283..322
e-value: 1.6E-4
score: 31.1
coord: 368..406
e-value: 0.039
score: 23.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 292..322
e-value: 7.2E-4
score: 20.3
coord: 329..365
e-value: 5.0E-5
score: 24.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 333..374
score: 11.945434
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 249..282
score: 9.205141
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 297..331
score: 12.914561
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 133..333
e-value: 1.9E-25
score: 91.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 334..458
e-value: 7.9E-21
score: 76.3
IPR036285PRP4-like superfamilyGENE3D4.10.280.110coord: 12..100
e-value: 1.1E-14
score: 55.7
IPR036285PRP4-like superfamilySUPERFAMILY158230PRP4-likecoord: 22..75
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 352..366
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 309..323
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 164..450

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_23_length_76035_cov_4.613123contigNODE_23_length_76035_cov_4.613123:50949..52337 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1828.t1Gcaud1828.t1Gracilaria caudata M_176_S67 malemRNANODE_23_length_76035_cov_4.613123 50949..52337 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1828.t1 ID=Gcaud1828.t1|Name=Gcaud1828.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=463bp
MDLEILPNTALESARAEHAQKLKQLQQRRIARSISLPTDDQQVKLALRSR
GHPICLFGEDAYDRRERLRAVMAEAGVTSLAQPQNENAVVAQKQDARREE
FYTEGTQQLRDLRVQVAHASLKAAAKRLENERNKTHTIKRWERDELETMH
RVRESALIASQGGGVRPFTAICYCETADGDLIVTGDWGGNVAVWKEHEDG
ISQLSCAAFHQERVSITRFYKGILTTAAADSFAVVSEYREGKFVQTVKLA
GHNGRVADVRVNPVRTSLVATAGFDGDVRLFDRGKPLLQQETGHDVVYRL
AFHEDGSLLGTAGFDGGIRLWDMRSGRAVMTFESAHVGDVTALEFCGGMP
WISSSGKDNCVRVWDVRKKRCVRTIAAHAKMVSALAIDRGFVMFSAGFDR
CVKAWALHRACGLVACWSGFDDKIMALDCSGDGSRVVAACYDKTWRVWGC
ERRAGGAVALQI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014906PRP4-like
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036285PRP4-like_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf