Gcaud1811.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1811.t1
Unique NameGcaud1811.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length266
Homology
BLAST of Gcaud1811.t1 vs. uniprot
Match: A0A2V3IJN9_9FLOR (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJN9_9FLOR)

HSP 1 Score: 341 bits (874), Expect = 2.070e-114
Identity = 196/261 (75.10%), Postives = 223/261 (85.44%), Query Frame = 0
Query:    1 MAVASFDASATILELFGGKNPRFDPVVVLEGHDSEVKSVAYSSSGGLLATCSRDRSVWLWEVGLDFDYSCIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEDDWFCSEILTGHTGTVWAVAFKGAQMASVSSDESLIIWQRESTGDYPAFRVVARVDNLHENGVLSVDWKTFIATSGADDSICILRRNDNEKQENSHGTQSATPDLKDKWSIGVRQPRAHRGDVNRVAWSPVEDNVLASCGDDGLVGIWLYDD 261
            +AVA FDA+AT+LELFGGKNPRFDPVV LEGHDSEVKSVAYSSSG LLATCSRDRSVW+WEVGLDF+Y+CIA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVED DDWFCSE+L+ HTGTVW VAF+GA MASVSSDESLI+W+RE   +YP FRV ARVD+LH+NG L V WKT IA+ GADD ICILR+  NE+++N+   +  T +L + W +  R+ RAH GDVNRVAWSPV DN+LASCGDDGLV +W Y D
Sbjct:   76 LAVACFDATATVLELFGGKNPRFDPVVCLEGHDSEVKSVAYSSSGALLATCSRDRSVWIWEVGLDFEYNCIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDADDWFCSEVLSAHTGTVWGVAFEGAAMASVSSDESLIVWRRELVRNYPTFRVAARVDHLHDNGALCVHWKTLIASGGADDCICILRKR-NEREQNTQSNEQITSNLTESWDVVAREQRAHTGDVNRVAWSPVHDNILASCGDDGLVRVWRYVD 335          
BLAST of Gcaud1811.t1 vs. uniprot
Match: R7QQ90_CHOCR (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ90_CHOCR)

HSP 1 Score: 243 bits (621), Expect = 9.660e-76
Identity = 168/285 (58.95%), Postives = 202/285 (70.88%), Query Frame = 0
Query:    1 MAVASFDASATILELFGGKNPRFDPVVVLEGHDSEVKSVAYSSSGGLLATCSRDRSVWLWEVGLDFDYSCIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEDDWFCSEILTGHTGTVWAVAFK--GAQMASVSSDESLIIWQRES-----TGDYPAFRVVARVDNLHENGVLSVDWK---TFIATSGADDSICILRRND------------NEKQENSHGT---QSA-TPDLKDKWSIGVRQPRAHRGDVNRVAWSPVEDNVLASCGDDGLVGIWLY 259
            +A ASFDASA +LEL GGK P  +  V LEGHDSEVKSVAYSSSG LLA+CSRD+SVW+WEVGLDFDY CIA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEDDWFC+E L GH GTVWA AF   G  +A+V++D  L IW RE+      G  PAF+VVAR   LH   + SVDW    + +AT G DD I I++  +             +++  ++G+   QSA T +LK +  +   + RAH GDVNRVAW+P++ ++LAS GDDGLV IW Y
Sbjct:   75 LACASFDASAFVLELMGGKTPHLEAAVSLEGHDSEVKSVAYSSSGALLASCSRDKSVWVWEVGLDFDYECIAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEDDWFCAETLAGHNGTVWAAAFGEGGTGLATVAADGGLAIWSRENPPANLAGANPAFQVVARYPKLHAGPIYSVDWNKSNSLLATGGGDDCIRIIQCTEISSPNAPSETSKTKEESTANGSVPEQSAITSNLKKRCEVMATEMRAHSGDVNRVAWNPIDQDILASSGDDGLVKIWKY 359          
BLAST of Gcaud1811.t1 vs. uniprot
Match: M2XEX8_GALSU (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XEX8_GALSU)

HSP 1 Score: 158 bits (399), Expect = 2.210e-42
Identity = 123/261 (47.13%), Postives = 165/261 (63.22%), Query Frame = 0
Query:   21 PRFDPVVVLEGHDSEVKSVAYSSSGGLLATCSRDRSVWLWEVGLDFD-YSCIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEDDWFCSEILTGHTGTVWAVAFK--GAQMASVSSDESLIIWQR-----ESTGDYPAFRVVARVDNLHENGVLSVDWKT---FIATSGADDSICILRRNDNEKQENSHGTQSATP---DLKDK----------WSIGVRQPRAHRGDVNRVAWSPVEDNVLASCGDDGLVGIW 257
            P+      LEGH+SE+K VA+SSSG LLA+CSRDR++WLWE+G+D D +  + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDE DW+C  +L+GH+ TVWA +F   G ++ +VS D S+I W++     +  G  P++     + + HE  + +VDW      + T G DD++ I + N   + E+S  T+       DL D           +SI      AH GD+N V W+P++  V ASCGDDG + IW
Sbjct:  125 PKLQLTSTLEGHESEIKCVAFSSSGALLASCSRDRTIWLWELGIDKDDFESLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEYDWYCCSVLSGHSSTVWAASFDKFGERLVTVSDDRSVIFWRQIPRRTDEVGRDPSWETFCVLRDQHERAIYTVDWSHQSGLVVTGGGDDALHIYQENALRRNESSDVTEEQFAPHRDLADDSGEVSHHAEPFSIAAVLLNAHEGDINCVKWNPLDGYVFASCGDDGFIYIW 385          
BLAST of Gcaud1811.t1 vs. uniprot
Match: A0A267FMV6_9PLAT (Uncharacterized protein (Fragment) n=2 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267FMV6_9PLAT)

HSP 1 Score: 139 bits (351), Expect = 7.060e-36
Identity = 116/268 (43.28%), Postives = 150/268 (55.97%), Query Frame = 0
Query:    1 MAVASFDASATILELFGGK-NPRFDPVVVLEGHDSEVKSVAYSSSGGLLATCSRDRSVWLWEVGLDFDYSCIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEDDWFCSEILTGHTGTVWAVAFK--GAQMASVSSDESLIIWQRES--TGDYPAFRVVARVDNLHENGVLSVDW---KTFIATSGADDSICILRRNDNEKQENSHGTQSATPDLKDKWSIGVRQPRAHRGDVNRVAWSPVEDNVLASCGDDGLVGIWLYD 260
            +A  SFDA+ T+     G+   RF+ V  LEGH++EVK VA+S SG  LATC RD+S+W+WE+  D D+ C++  XXXXXXXXXXXXXXXXXXXXXXXXXXX     ED DDW     L+GH  TVW  AF   G ++AS S+D +L +W      T     +R  A +   HE  + S  W   + ++ ++  D+SIC+   N          T S        W +  R   AH  DVN V W P  DN+  S GDD LV +W  D
Sbjct:   80 LACGSFDATITVYSRQDGEVGSRFESVAKLEGHENEVKDVAWSPSGHYLATCGRDKSLWVWEMDDDSDFQCLSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXLKLHREDGDDWCSFATLSGHESTVWRAAFSPDGKRLASCSADRTLRVWSAAGAPTDGPTTWRCEATLTGGHELPIFSCSWHPSRDWLLSASQDNSICLWTAN----------TDSGC------WDLVERVADAHCEDVNDVKWHPTIDNLFVSVGDDCLVKVWTVD 331          
BLAST of Gcaud1811.t1 vs. uniprot
Match: A0A1I8GKD2_9PLAT (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8GKD2_9PLAT)

HSP 1 Score: 133 bits (334), Expect = 5.340e-32
Identity = 114/262 (43.51%), Postives = 147/262 (56.11%), Query Frame = 0
Query:    1 MAVASFDASATILELFGGK-NPRFDPVVVLEGHDSEVKSVAYSSSGGLLATCSRDRSVWLWEVGLDFDYSCIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEDDWFCSEILTGHTGTVWAVAFK--GAQMASVSSDESLIIWQRES--TGDYPAFRVVARVDNLHENGVLSVDW---KTFIATSGADDSICILRRNDNEKQENSHGTQSATPDLKDKWSIGVRQPRAHRGDVNRVAWSPVEDNVLASCGDDGLV 254
            +A  SFDA+ T+     G+   RF+ V  LEGH++EVK VA+S SG  LATC RD+S+W+WE+  D D+ C++  XXXXXXXXXXXXXXXXXXXXXXXXXXX     ED DDW     L+GH  TVW  AF   G ++AS S+D +L +W      T     +R  A +   HE  + S  W   + ++ ++  D+SIC+   N          T S        W +  R   AH  DVN V W P  DN+  S GDD LV
Sbjct:   82 LACGSFDATITVYSRQDGEVGSRFESVAKLEGHENEVKDVAWSPSGHYLATCGRDKSLWVWEMDDDSDFQCLSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXLKLHREDGDDWCSFATLSGHESTVWRAAFSPDGKRLASCSADRTLRVWSAAGAPTDGPTTWRCEATLTGGHELPIFSCSWHPSRDWLLSASQDNSICLWTAN----------TDSGC------WDLVERVADAHCEDVNDVKWHPTIDNLFVSVGDDCLV 327          
BLAST of Gcaud1811.t1 vs. uniprot
Match: S8A8J9_DACHA (Probable cytosolic iron-sulfur protein assembly protein 1 n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8A8J9_DACHA)

HSP 1 Score: 132 bits (331), Expect = 9.580e-32
Identity = 119/270 (44.07%), Postives = 158/270 (58.52%), Query Frame = 0
Query:   27 VVLEGHDSEVKSVAYSSSGGLLATCSRDRSVWLWEVGLDFDYSCIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEDDWFCSEILTGHTGTVWAVAFKGA----QMASVSSDESLIIWQRESTGDYPAFRVVAR--------------------VDNLHENGVLSVDWKT---FIATSGADDSICILRRNDNEKQENSHGTQSATPDLKDKWSIGVRQPRAHR-GDVNRVAWSPVEDN--------VLASCGDDGLVGIWLYD 260
            VVL+GHDSEVKSVA+S+ G  LATCSRD+SVW+WE     +Y  IAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  ED DDW C  +LTGHT TVW+++F+ A    ++AS S D++  +W+R+S     A + V +                    +  +H   + S+DW      IAT+G D  I + +    +  +   G+ S       +W I  + P AH   ++N VAW P  DN        VL S GDDG+V ++ ++
Sbjct:  249 VVLDGHDSEVKSVAWSAGGSFLATCSRDKSVWIWEEMEGDNYETIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKEDVDDWVCCAVLTGHTSTVWSISFENAGSASRLASASDDQTARVWKRKSR--IAAMKPVVQQPSIIKQAEDETEDWEEECCLPKVHSRTIYSIDWSKNTGLIATAGGDGLIIVYQEIKIDNLQPQFGSSSP------EWKIVAQIPAAHGVHEINSVAWCPKWDNEGLKTKEEVLLSAGDDGVVNVFEFE 510          
BLAST of Gcaud1811.t1 vs. uniprot
Match: A0A5B8N208_9CHLO (WD40 repeat domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8N208_9CHLO)

HSP 1 Score: 127 bits (320), Expect = 1.090e-31
Identity = 115/272 (42.28%), Postives = 162/272 (59.56%), Query Frame = 0
Query:    1 MAVASFDASATILELFG---GKNPRFDPVVVLEGHDSEVKSVAYSSSGGLLATCSRDRSVWLWEVGLDFDYSCIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEDDWFCSEILT----GHTGTVWAVAF--KGAQMASVSSDESLIIWQRESTGDYPAFRVVARVDNLHENGVLSVDWKT--FIATSGADDSICILRRNDNEKQENSHGTQSATPDLKDKWSIGVRQPRAHRGDVNRVAWSPVEDNVLASCGDDGLVGIWLYDD 261
            +A  SFDA+  I +  G     +  +D VV LEGH+SE+K VA+S  G LLATC RD+S+W+W   +D  + C+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E  D+W C++ L     GH  TVW +A   +G+++ S      +++W  E+       ++V+R     +  + S+DW +   IA   AD+SI +L+    E+ E     + A     +   +     +AH GDVN V ++P + N+LAS GDD LV +W  +D
Sbjct:   24 IATVSFDATTCIWDKGGQASATDAEWDLVVTLEGHESEIKDVAWSPDGELLATCGRDKSIWIWLKEIDDQFECLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNECNDEWLCTQTLDTAYQGHESTVWNLACNQEGSKLLSCDDTGMILLWSIETCDSSVELKLVSRNKVPSDFSIYSIDWASSGLIAIGSADNSISLLQL---ERSEGGAAGEEADKRGNEILKLVKEVKQAHAGDVNCVRFNPKDPNLLASAGDDELVKLWRIND 292          
BLAST of Gcaud1811.t1 vs. uniprot
Match: A0A2G5B4H6_COERN (Probable cytosolic iron-sulfur protein assembly protein 1 n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B4H6_COERN)

HSP 1 Score: 129 bits (324), Expect = 1.690e-31
Identity = 124/281 (44.13%), Postives = 163/281 (58.01%), Query Frame = 0
Query:    1 MAVASFDASATILELFGGKNPRFDPVVVLEGHDSEVKSVAYSSSGGLLATCSRDRSVWLWEVGLDFDYSCIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDEDDWFCSEILTGHTGTVWAVAFK--GAQMASVSSDESLIIWQRESTGDYPA-------------FRVVARV-DNLHENGVLSVDWKTFI---ATSGADDSICILRRNDNEKQENSHGTQSATPDLKDKWSIGVRQPRAHR-GDVNRVAWSPVEDNVLASCGDDGLVGIWLYDD 261
            +A ASFD +  I E  G  +  +D V  LEGH++E KSVA+S+SG LLATC RD+SVW+WE   + D+    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +++DDW+ +  LTGHT TVW  AF   G  +ASVS D ++ +W   +T D  +             +  VA V D++H   + SV W   +   A+SG   S   L        +N+      T D     ++   Q  AH   D+N V W+P+    LA+CGDDG V IW  ++
Sbjct:  107 LATASFDGTTAIWER-GPNDETYDCVATLEGHENEAKSVAWSASGQLLATCGRDKSVWIWESNGEGDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDEDDDWYSAATLTGHTSTVWGGAFSHNGKYLASVSDDRTVRVWTWGATPDENSDANAGLYYRPGISYECVATVPDSVHTRAIYSVSWGIPLKNAASSGDSSSSDDLGYLATGCGDNTLRIFKVTADGSLDVTLICTQENAHGLSDINCVEWNPMHPGWLATCGDDGAVRIWYLEE 386          
BLAST of Gcaud1811.t1 vs. uniprot
Match: A0A7S4I437_9STRA (Probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I437_9STRA)

HSP 1 Score: 128 bits (321), Expect = 8.530e-31
Identity = 96/303 (31.68%), Postives = 135/303 (44.55%), Query Frame = 0
Query:    1 MAVASFDASATILELF-----GGKNPRFDPVVVLEGHDSEVKSVAYSSSGGLLATCSRDRSVWLWEVGL------------DFDYSCIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------VEDEDDWFCSEILTG-HTGTVWAVAFKG--AQMASVSSDESLIIW-----------QRESTGDYPAFRVVARVDNLHENGVLSVDWKTF------IATSGADDSICILRRNDNEKQENSHGTQSATPDLKDKWSIGVRQPRAHRGDVNRVAWSPVEDNVLASCGDDGLVGIWLY 259
            +A ASFD +  I E F     G     ++    LEGH+SEVK VA++ +G LLATC RD+SVW+WE  L            D ++ CIA                                         ED  DW+C+  L+  H+ TVW+VA  G  A++ S S+D+SL +W           + +S G    ++ V R+   H+  V SV           IA+ GADD I +             G  S TP    ++++    P AH GDVN V W P + ++L+S GDDGLV +W Y
Sbjct:  135 LASASFDGTVAIWERFDDNGIGSGEGGWECTAQLEGHESEVKCVAWNGTGSLLATCGRDKSVWIWESFLSGTVGGAEGGSGDGEFECIAVLHGHTGDVKSVAFAPSLGQWGDGDEVLFSASYDDTIKCWAEDAGDWYCAATLSSAHSSTVWSVAAAGGGARLVSGSADKSLAVWKCYTATERRRMEPDSEGSDGLWKCVGRLPGAHDFAVHSVHCSPSRAGHGRIASGGADDCINVYCE---------VGGSSDTP----QFALDATAPGAHSGDVNCVRWHPRDGSILSSAGDDGLVKVWRY 424          
BLAST of Gcaud1811.t1 vs. uniprot
Match: B8CDW5_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CDW5_THAPS)

HSP 1 Score: 121 bits (304), Expect = 3.420e-29
Identity = 85/289 (29.41%), Postives = 124/289 (42.91%), Query Frame = 0
Query:    1 MAVASFDASATILELFGGKNPR--FDPVVVLEGHDSEVKSVAYSSSGGLLATCSRDRSVWLWEVGL---------------DFDYSCIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------VEDEDDWFCSEILTGHTGTVWAVAFK--GAQMASVSSDESLIIWQRESTGD----YPAFRVVARVDNLHENGVLSVDWKTFIATSGADDSICILRRNDNEKQENSHGTQSATPDLKDKWSIGVRQPRAHRGDVNRVAWSPVEDNVLASCGDDGLVGIWLY 259
            +A ASFD    I E F  +     F+P+  LEGH++E+K +A++ +G LLA+C RD+++W+WE  L               + ++ C+A                                         E+  DW+C+  L  HT TVW +     G +  S S D S+ IW+  +  +    +P    V+  D L  +G         IA+ G D+ I I R    E   +  G+ S  P    K++I      AH GDVN V W P +   L SCGDDG V IW Y
Sbjct:   33 LASASFDGKVLIWEHFADEENHGTFEPIAQLEGHENEIKHLAWNQTGSLLASCGRDKTIWIWECFLPGTVGGSASGGGGDDEGEFECLAVLQGHEGDVKSIAFALSHGQWGEGDEILLSASYDNSIKVWAEESGDWYCAATLAVHTSTVWCLGINPGGVRFLSGSEDGSMAIWKMYTATERKRLFPREHAVSSTDGLWNSG------HGRIASGGGDNCIQIYRE---ETGGSGAGSSSDAP----KFAIEAMAINAHDGDVNCVKWYPRDGTSLVSCGDDGAVRIWKY 308          
The following BLAST results are available for this feature:
BLAST of Gcaud1811.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJN9_9FLOR2.070e-11475.10Probable cytosolic iron-sulfur protein assembly pr... [more]
R7QQ90_CHOCR9.660e-7658.95Probable cytosolic iron-sulfur protein assembly pr... [more]
M2XEX8_GALSU2.210e-4247.13Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A267FMV6_9PLAT7.060e-3643.28Uncharacterized protein (Fragment) n=2 Tax=Macrost... [more]
A0A1I8GKD2_9PLAT5.340e-3243.51Probable cytosolic iron-sulfur protein assembly pr... [more]
S8A8J9_DACHA9.580e-3244.07Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A5B8N208_9CHLO1.090e-3142.28WD40 repeat domain-containing protein n=1 Tax=Chlo... [more]
A0A2G5B4H6_COERN1.690e-3144.13Probable cytosolic iron-sulfur protein assembly pr... [more]
A0A7S4I437_9STRA8.530e-3131.68Probable cytosolic iron-sulfur protein assembly pr... [more]
B8CDW5_THAPS3.420e-2929.41Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 22..61
e-value: 2.4E-8
score: 43.8
coord: 67..106
e-value: 5.4E-10
score: 49.2
coord: 216..258
e-value: 0.0032
score: 26.7
coord: 111..148
e-value: 0.029
score: 23.5
coord: 157..194
e-value: 87.0
score: 4.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 223..257
e-value: 0.0025
score: 18.6
coord: 25..60
e-value: 2.5E-6
score: 28.1
coord: 69..105
e-value: 2.0E-8
score: 34.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 74..105
score: 14.217871
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 225..265
score: 10.374778
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 118..148
score: 8.904377
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 29..62
score: 14.151034
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..265
e-value: 4.4E-71
score: 241.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..220
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 74..105
score: 11.761044
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 225..265
score: 10.047417
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 29..62
score: 11.708317
IPR028608Probable cytosolic iron-sulfur protein assembly protein, CIAO1/Cia1PANTHERPTHR19920WD40 PROTEIN CIAO1coord: 2..260
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 48..62
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..257

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_23_length_76035_cov_4.613123contigNODE_23_length_76035_cov_4.613123:5237..6034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1811.t1Gcaud1811.t1Gracilaria caudata M_176_S67 malemRNANODE_23_length_76035_cov_4.613123 5237..6034 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1811.t1 ID=Gcaud1811.t1|Name=Gcaud1811.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=266bp
MAVASFDASATILELFGGKNPRFDPVVVLEGHDSEVKSVAYSSSGGLLAT
CSRDRSVWLWEVGLDFDYSCIAVLHGHAGDVKCVAWHPECELLVSCSYDE
TIRVWVEDEDDWFCSEILTGHTGTVWAVAFKGAQMASVSSDESLIIWQRE
STGDYPAFRVVARVDNLHENGVLSVDWKTFIATSGADDSICILRRNDNEK
QENSHGTQSATPDLKDKWSIGVRQPRAHRGDVNRVAWSPVEDNVLASCGD
DGLVGIWLYDDGENE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR028608CIAO1/Cia1
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf