Gcaud1810.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1810.t1
Unique NameGcaud1810.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length299
Homology
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BLAST of Gcaud1810.t1 vs. uniprot
Match: A0A2V3IJU8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJU8_9FLOR)

HSP 1 Score: 499 bits (1285), Expect = 5.080e-177
Identity = 239/298 (80.20%), Postives = 274/298 (91.95%), Query Frame = 0 
Query:    1 MSPRLSPFMSLSSEHPQAIARNLRLLVMADLGATPQRIAQLSQWLSEHNFSFTIDAVLVIGVSRTPPPHEYPHQLYAEQGNDSATIAELEQICPRVVYVPGLHETSASWDTKAGPPLLSSSSVNAISGPAFLTEDLIVVHRRYADGLTEKPILQLPSSWKETLYAKLRRPRRFRQPPRNSAILLSSSELPNNSTGLSLMRTVRSLLHLKRSAPDYDLILVVAPSKMQRVPSASNVFKSADRILDPGLFVDGYFCIIDLQRPDIWDPAKEPEVEEGQLDSEAAWEILRVSRYNLDGVPD 298
            M P L PFMSL+S+HP A +RNLRLLV+ADLGATPQRIA LSQWLSEH+FSFTIDAVL IGVSR PPPH+ PH+L AEQGND+ATIAELEQICPRVVYVPGL+E+SASWDTKAGPPLLSSSSVNAISGP +LT DL+VVHRR+ADGLTEKPILQLPSSWK+TL+ KLR PRRFR+PPR+SAI+LSSSELPN+STGLSLMRTVRS+LHLKRS PDYDLIL++AP +MQRVPS SNV K+AD+++DPG FVDGYFCII+L+RPDIWDP KEPEV++ QLDSE AW++LRV++Y LDG PD
Sbjct:    1 MPPSLPPFMSLASDHPNANSRNLRLLVVADLGATPQRIAALSQWLSEHSFSFTIDAVLAIGVSRAPPPHKEPHRLAAEQGNDAATIAELEQICPRVVYVPGLYESSASWDTKAGPPLLSSSSVNAISGPVYLTNDLVVVHRRFADGLTEKPILQLPSSWKKTLHEKLRPPRRFREPPRHSAIVLSSSELPNHSTGLSLMRTVRSMLHLKRSPPDYDLILIIAPPRMQRVPSTSNVLKTADQVIDPGRFVDGYFCIIELERPDIWDPVKEPEVDDAQLDSETAWDLLRVAKYKLDGDPD 298
The following BLAST results are available for this feature:
BLAST of Gcaud1810.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IJU8_9FLOR5.080e-17780.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_23_length_76035_cov_4.613123contigNODE_23_length_76035_cov_4.613123:4311..5207 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1810.t1Gcaud1810.t1Gracilaria caudata M_176_S67 malemRNANODE_23_length_76035_cov_4.613123 4311..5207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1810.t1 ID=Gcaud1810.t1|Name=Gcaud1810.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=299bp
MSPRLSPFMSLSSEHPQAIARNLRLLVMADLGATPQRIAQLSQWLSEHNF
SFTIDAVLVIGVSRTPPPHEYPHQLYAEQGNDSATIAELEQICPRVVYVP
GLHETSASWDTKAGPPLLSSSSVNAISGPAFLTEDLIVVHRRYADGLTEK
PILQLPSSWKETLYAKLRRPRRFRQPPRNSAILLSSSELPNNSTGLSLMR
TVRSLLHLKRSAPDYDLILVVAPSKMQRVPSASNVFKSADRILDPGLFVD
GYFCIIDLQRPDIWDPAKEPEVEEGQLDSEAAWEILRVSRYNLDGVPD*
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