Gcaud1784.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1784.t1
Unique NameGcaud1784.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length360
Homology
BLAST of Gcaud1784.t1 vs. uniprot
Match: A0A2V3IUH7_9FLOR (Replication factor C subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUH7_9FLOR)

HSP 1 Score: 555 bits (1429), Expect = 6.170e-197
Identity = 285/358 (79.61%), Postives = 317/358 (88.55%), Query Frame = 0
Query:    1 MKDGA-QLWVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQLAVSSNVNTKRSDGKTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNSLPLEAMKAYLAKIATAEHVKVSDETLESLIEASEGDLRKAINTMQTAQRIQSDAELDIDSISAAACLVPPSVVDTFDSSITAKGASNASVRKAVDEILVEGYSSGQLLTQYADRLIGRRSSSGVGTLSDLQKAAISLVIADAEKALIDGCDEKVQLYDIASRISRIANTADGDVTALR 357
            MK+ A QLWVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQ+YRSRVLELNASDERGIKVVRDKIKVFAQ+AV SNVNTK  DGKTYPCPPYK+IILDEADAIT DAQTALRRTME +SRVTRFIIICNY+SRIIGPLASRCAKFRFN LP++AMK ++ +IA  E VKVSDETL+ LI +S+GDLRKAINTMQ+A R+QSD +LD+DSISAAACLVPPSVV  FD + TAKG +N SVRKAVDEIL EGYS  QLL QYADRL  R  S GV  ++D+QKA+++LVIA AEKALIDGCDEK+QLYD+AS ISRIA+  + D+  L+
Sbjct:    1 MKEAAAQLWVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQHYRSRVLELNASDERGIKVVRDKIKVFAQIAVVSNVNTKGPDGKTYPCPPYKIIILDEADAITRDAQTALRRTMEVYSRVTRFIIICNYVSRIIGPLASRCAKFRFNPLPMDAMKGHMRRIAKDEGVKVSDETLKFLIHSSDGDLRKAINTMQSAHRMQSDTDLDMDSISAAACLVPPSVVAAFDKATTAKGHTNTSVRKAVDEILSEGYSPIQLLAQYADRLNRRTQSEGVSKMNDMQKASLALVIASAEKALIDGCDEKIQLYDVASSISRIAHAPE-DIQVLK 357          
BLAST of Gcaud1784.t1 vs. uniprot
Match: R7Q2F6_CHOCR (AAA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2F6_CHOCR)

HSP 1 Score: 471 bits (1211), Expect = 6.860e-161
Identity = 233/351 (66.38%), Postives = 284/351 (80.91%), Query Frame = 0
Query:    2 KDGAQLWVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQLAVSSNVNTKRSDGKTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNSLPLEAMKAYLAKIATAEHVKVSDETLESLIEASEGDLRKAINTMQTAQRIQS--DAELDIDSISAAACLVPPSVVDTFDSSITAKGASNASVRKAVDEILVEGYSSGQLLTQYADRLIGRRSSSGVGTLSDLQKAAISLVIADAEKALIDGCDEKVQLYDIASRISRIANTAD 350
            ++G+QLWVEKYRPR +++V HQ++VV+TLQ+AV E AGRG+LPHLL YGPPGTGKTSTALAL RDLFG QN R+RVLELNASDERGIKVVRDKIK FAQ  VS+ V  K  D + YPCP +KV+ILDEADAIT DAQTALRRTMEAHS+VTRFI+ICNYISRIIGPL SRCAKFRFNS+P+ AM  +L  IA  E V ++D+TL SLIE SEGDLRKAINTMQ+A R+ S     LD+D ISA ACL+PP V+D FD+     G +N+ VRK VDEI+++GYS  QLL+QY DRL+      G+  ++DLQ++A+++++ADAEK L DGCDEK+QLY++AS+ISRIA   D
Sbjct:  192 REGSQLWVEKYRPRKITDVTHQDQVVSTLQRAVTESAGRGELPHLLFYGPPGTGKTSTALALVRDLFGVQNLRARVLELNASDERGIKVVRDKIKTFAQTTVSNPVPAKHGDTRKYPCPAFKVVILDEADAITIDAQTALRRTMEAHSKVTRFILICNYISRIIGPLTSRCAKFRFNSIPMHAMMGHLKGIAKREGVDIADDTLRSLIETSEGDLRKAINTMQSAHRMHSMTKGSLDMDMISAVACLIPPRVLDMFDAKTAEVGLTNSEVRKVVDEIVMDGYSVSQLLSQYGDRLLKDDGCDGIRDMNDLQRSAVAVILADAEKGLNDGCDEKLQLYNVASKISRIAGMKD 542          
BLAST of Gcaud1784.t1 vs. uniprot
Match: UPI001E1D2BC3 (replication factor C subunit 2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2BC3)

HSP 1 Score: 371 bits (953), Expect = 9.210e-125
Identity = 201/345 (58.26%), Postives = 250/345 (72.46%), Query Frame = 0
Query:    8 WVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFG-PQNYRSRVLELNASDERGIKVVRDKIKVFAQLAVSSNVNTKRSDGKTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNSLPLEAMKAYLAKIATAEHVKVSDETLESLIEASEGDLRKAINTMQTAQRI-QSDAELDIDSISAAACLVPPSVVDTFDSSITAKGASNASVRKAVDEILVEGYSSGQLLTQYADRLIGRRSSSGVGTLSDLQKAAISLVIADAEKALIDGCDEKVQLYDIASRISRIANTAD 350
            WVEKYRPR V EV+HQEEVVATLQ+ V   A  GD+PH+LLYGPPGTGKTS ALALCRDLFG  + YRSRVLELNASDERGI+VVR+KIK FAQ +VS+     +  GK+   PP+KVI+LDEADAIT DAQTALRRTME HSR TRFI+ICNY+SRII PLASRCAKFRF  LP  AM   L  +A  E V V D+TL  LI+AS GDLRKAI T+Q+  RI +  AE+    I+ AACLVP  V++ FD S      S+ ++R+ V+ I+ +GYSS +LL++Y+ R++      GV  L+ +QKAAIS+ +A A+  L+DG DE +Q+Y + S+I+      D
Sbjct:    9 WVEKYRPRTVGEVSHQEEVVATLQRIVHSGAAHGDMPHMLLYGPPGTGKTSAALALCRDLFGIGEVYRSRVLELNASDERGIQVVREKIKTFAQRSVSA---IPKGAGKSMT-PPFKVIVLDEADAITADAQTALRRTMETHSRTTRFILICNYVSRIIAPLASRCAKFRFKPLPSRAMFDRLQFVAKEESVNVLDDTLHDLIDASGGDLRKAITTLQSTHRITKPGAEVSSSDIANAACLVPKEVLEDFDVSSVNPSMSHKALREKVNSIVRDGYSSAELLSRYSLRIMNA-DGIGVAKLNGVQKAAISIAVAQADANLVDGADELLQMYSVLSKITTAVRNPD 348          
BLAST of Gcaud1784.t1 vs. uniprot
Match: A0A5J4YXB4_PORPP (Replication factor C subunit 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXB4_PORPP)

HSP 1 Score: 346 bits (887), Expect = 1.290e-114
Identity = 183/343 (53.35%), Postives = 244/343 (71.14%), Query Frame = 0
Query:    8 WVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQLAVSSNVNTKRSDGKTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNSLPLEAMKAYLAKIATAEHVKVSDETLESLIEASEGDLRKAINTMQTAQRIQSDA-ELDIDSISAAACLVPPSVVDTFDSSITAKGASNASVRKAVDEILVEGYSSGQLLTQYADRLIGRRSSSGVGTLSDLQKAAISLVIADAEKALIDGCDEKVQLYDIASRISRIANTA 349
            W EKYRP+ V++VAHQ+EVV  L  A+ +  G+G+LPHLL YGPPGTGKTSTALALCR +FG Q++++RVLELNASDERGIKVVRD+IK FAQ +V     T +  G+  P   +K+IILDEADAITTDAQTALRRTME  S  TRFI+ICNYISRII PLASRCAK RF  LP+ AM+A+L+ IA+ E + +S + L+ + EASEGD+R+AI T+Q+  R+     ++D +++  AACLVP SV+D F++++     S   +   +  I+ +GYS  QL+ Q+  R I   + + +  LSDLQK+A+ L +A+AE  +IDG DE +QL DI  R+      A
Sbjct:    9 WSEKYRPQKVAQVAHQDEVVRMLSSALDD--GQGNLPHLLFYGPPGTGKTSTALALCRQMFGAQHFKARVLELNASDERGIKVVRDRIKTFAQTSVPEGRITNKETGRAVPA--FKIIILDEADAITTDAQTALRRTMETFSLTTRFILICNYISRIIAPLASRCAKCRFMPLPMSAMRAHLSHIASGEGLSISTQLLDHMCEASEGDMRRAITTLQSTSRMAGPGGDMDDEALVTAACLVPESVLDDFEAAVLGS-CSFKDMSLVLTNIVDDGYSVSQLILQFGRR-IQENTRASIAGLSDLQKSAVVLKLAEAEAQMIDGADEWLQLQDIGGRLRETVQCA 345          
BLAST of Gcaud1784.t1 vs. uniprot
Match: A0A1X6P2U3_PORUM (AAA domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2U3_PORUM)

HSP 1 Score: 317 bits (813), Expect = 2.600e-103
Identity = 178/360 (49.44%), Postives = 239/360 (66.39%), Query Frame = 0
Query:    8 WVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQN---YRSRVLELNASDERGIKVVRDKIKVFAQLAVSSNVNTKRSDGKTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNSLPLEAMKAYLAKIATAEHVKVSDETLESLIEASEGDLRKAINTMQTAQRIQSDAE-LDIDSISAAACLVPPSVVDTFDSSITAKGASNASVRKAVDEILVEGYSSGQLLTQYADRLIGRRSS----SGVGTLSDLQKAAISLVIADAEKALIDGCDEKVQLYDIASRISRIANTADGDVTALRKA 359
            WVEKYRP ++++V HQ + V+TL ++V   + R +LPHLLLYGPPGTGKTSTALAL R+L+GP     Y +RVLELNASDERGI VVR +I  FA  AV +   T       +P PPYK+IILDEADA+T DAQTALRR ME  SRVTRFI+ICNY+SR+I PLASRCAKFRF  LP  A+   L  IA AE V +  +  ++L+ A+ GDLR+AI  +Q+A R+   A+ L  D+I+AAAC +P  VV   +++  A      +VR AV+ ++  GY++  +L +   R+ G         GV +++DLQKAA+++ +ADAE+ LIDG DE +QL D+   +  I   A+  +  L  A
Sbjct:   14 WVEKYRPTSIADVRHQAQAVSTLTRSVA--SARANLPHLLLYGPPGTGKTSTALALARELYGPPGSAAYTARVLELNASDERGIAVVRHRINTFAAGAVHTAYTTPAG----HPTPPYKLIILDEADAVTADAQTALRRAMETTSRVTRFILICNYVSRVIPPLASRCAKFRFAPLPAAAVGDTLDSIAGAEGVDLPSDGRDTLVAAAGGDLRRAITLLQSAARVAGPADPLTPDAIAAAACTLPAEVVSGLEAA--AASGQFGAVRDAVEGVVAGGYAATSVLVELGRRVAGESGGVDVKGGVASMNDLQKAAVAVKLADAERRLIDGADETLQLLDVGCCLMVIGRNAESPMLILPSA 365          
BLAST of Gcaud1784.t1 vs. uniprot
Match: A0A4R0RJ17_9APHY (AAA domain-containing protein n=1 Tax=Steccherinum ochraceum TaxID=92696 RepID=A0A4R0RJ17_9APHY)

HSP 1 Score: 317 bits (811), Expect = 6.130e-103
Identity = 169/358 (47.21%), Postives = 239/358 (66.76%), Query Frame = 0
Query:    6 QLWVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQLAVSSNVNTKRSDGKTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNSLPLEAMKAYLAKIATAEHVKVSDETLESLIEASEGDLRKAINTMQTAQRIQSDAE----LDIDSISAAACLVPPSVVDTFDSSITAKGASNA---------------SVRKAVDEILVEGYSSGQLLTQYADRLIGRRSSSGVGTLSDLQKAAISLVIADAEKALIDGCDEKVQLYDIASRISR 344
            Q WVEKYRP+ + +V+ QE  VA LQ+ +       +LPH+L YGPPGTGKTST LAL R LFGP N+RSRVLELNASDERGI +VRDKIK FA+   +    T  SDGKTYPCPPYK+IILDEAD++T DAQ ALRR ME ++R+TRF ++CNY++RII PLASRC+KFRF  L   +  + L +IA+AE+V VSDE +++LI  S+GDLR++I  +Q+A R+ +  +    +    I   A +VP  V+++F +++   GA+N                 +R  V +I+ EGYS+ Q+L+Q  D ++         TL+  +KA  ++V A+A+KAL DG DE++ + ++A ++ +
Sbjct:   23 QPWVEKYRPKTIDDVSAQEHTVAVLQRTLTST----NLPHMLFYGPPGTGKTSTILALARQLFGPDNFRSRVLELNASDERGISIVRDKIKNFARQ--TPRAQTVASDGKTYPCPPYKIIILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRIIDPLASRCSKFRFKPLDPTSTSSRLTQIASAENVAVSDEVVQTLISTSQGDLRRSITYLQSASRLSTSTKPPTPITPSDIQEIAGVVPDPVINSFAATLGIDGANNDMDVDDGPAAKAKGFDGIRSKVKQIVREGYSATQILSQLHDLVVDHP------TLAAQKKAKCAMVFAEADKALCDGADEELWILEVALQVHK 368          
BLAST of Gcaud1784.t1 vs. uniprot
Match: D2VRF7_NAEGR (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VRF7_NAEGR)

HSP 1 Score: 314 bits (805), Expect = 2.130e-102
Identity = 175/354 (49.44%), Postives = 243/354 (68.64%), Query Frame = 0
Query:    6 QLWVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQLAVSSNVNTKRSDGKTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNSLPLEAMKAYLAKIATAEHVKVSDE-TLESLIEASEGDLRKAINTMQTAQRIQSDAELDIDSISAAACLVPPSVVDTFDSSITAKGASNASV-RKAVDEILVEGYSSGQLLTQYADRLIGRRSSSGVGTLSDLQKAAISLVIADAEKALIDGCDEKVQLYDIASRISRIANT-ADGDVTAL 356
            Q W EKYRP+ V +V HQEEVV+ L+K+++     G+LPHLL YGPPG GKTSTA A+ + LFGP+ Y++RVLELNASDERGI V+R K+K FAQ AVS N   K   GK YPCPP+K+IILDEAD++T DAQ+ALRRTME +S VTRF +ICNY+SRII P+ SRCAKFRF  L    +K  L  IA  E + + DE  L++++  SEGDLRKAI T+Q+A R+  +A +  + I+  + LVP  +++     +T    ++  V R  V++I+ +G+++ Q++TQ    L+   S +    + D+Q++ I L I++ +K LIDG DE +QL  +AS IS+   T ADGDV+ +
Sbjct:    7 QPWTEKYRPKTVDDVVHQEEVVSALKKSLEV----GNLPHLLFYGPPGNGKTSTATAIAKQLFGPELYKTRVLELNASDERGINVIRTKVKTFAQTAVSENPTGK---GK-YPCPPFKIIILDEADSMTVDAQSALRRTMETYSNVTRFCLICNYVSRIIDPITSRCAKFRFKPLEYSLLKERLQYIANQEGITLKDEKVLDTIVGHSEGDLRKAITTLQSASRMFGNA-ISQNHIAEISGLVPDEIIEEI---LTLSQQTDLGVIRSGVNKIIKQGFAAYQIITQLGRYLL---SEACCVKMDDIQRSKILLKISECDKCLIDGADEFLQLLSLASYISKTLQTDADGDVSMM 345          
BLAST of Gcaud1784.t1 vs. uniprot
Match: A0A060S8B3_PYCCI (AAA domain-containing protein n=2 Tax=Trametes TaxID=5324 RepID=A0A060S8B3_PYCCI)

HSP 1 Score: 314 bits (805), Expect = 5.440e-102
Identity = 175/365 (47.95%), Postives = 234/365 (64.11%), Query Frame = 0
Query:    6 QLWVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQLAVSSNVNTKRSDGKTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNSLPLEAMKAYLAKIATAEHVKVSDETLESLIEASEGDLRKAINTMQTAQRIQ--SDAELDID--SISAAACLVPPSVVDTF------------------DSSITAKGASNASVRKAVDEILVEGYSSGQLLTQYADRLIGRRSSSGVGTLSDLQKAAISLVIADAEKALIDGCDEKVQLYDIASRISRIANT 348
            Q WVEKYRP+ + +V+ QE  VA L+K +       +LPH+L YGPPGTGKTST LAL R LFGP N+RSRVLELNASDERGI +VR+KIK FA+   +       SDGKTYPCPPYK+IILDEAD++T DAQ ALRR ME ++R+TRF ++CNY++RII PLASRC+KFRF  L   +  A LA+IA+AE+V V+ ET+++LI  S+GDLR+AI  +Q+A R+   S    DI    I   A +VP  V++ F                  D S   K      V++ V  ++ EGYS+ QL++Q  D ++         TL+  QK   +L  A+A+KAL DG DE++ + ++A RI R  N+
Sbjct:   22 QPWVEKYRPKTIDDVSAQEHTVAVLRKTLTST----NLPHMLFYGPPGTGKTSTILALARQLFGPDNFRSRVLELNASDERGISIVREKIKNFARQ--TPRAQAVASDGKTYPCPPYKIIILDEADSMTQDAQAALRRIMELYARITRFCLVCNYVTRIIEPLASRCSKFRFKPLDPASTSARLAQIASAENVPVTPETVDALISTSQGDLRRAITYLQSASRLALASTPPTDITPRDIQEIAGVVPDGVIEDFAVALGIERVHGDGMDVDVDDSGRVKAKGFEGVKRKVKGVIREGYSASQLISQLHDHVVAHP------TLTPRQKTRCALAFAEADKALCDGADEELWILEVALRIHRAMNS 374          
BLAST of Gcaud1784.t1 vs. uniprot
Match: A0A5C3MP24_9AGAR (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Crucibulum laeve TaxID=68775 RepID=A0A5C3MP24_9AGAR)

HSP 1 Score: 314 bits (804), Expect = 7.000e-102
Identity = 173/357 (48.46%), Postives = 232/357 (64.99%), Query Frame = 0
Query:    6 QLWVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQLAVSSNVNTKRSDGKTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNSLPLEAMKAYLAKIATAEHVKVSDETLESLIEASEGDLRKAINTMQTAQRIQSDAE----LDIDSISAAACLVPPSVVDTF--------DSSITAKGASNA------SVRKAVDEILVEGYSSGQLLTQYADRLIGRRSSSGVGTLSDLQKAAISLVIADAEKALIDGCDEKVQLYDIASRISR 344
            Q WVEKYRP+ + EV+ QE  VA LQK +       +LPH+L YGPPGTGKTST LAL R LFGP N+R+RVLELNASDERGI +VR+KIK FA+   +       SDGKTYPCPPYK+IILDEAD++T DAQ ALRR ME ++R+TRF ++CNY++RII PLASRC+KFRF  L   +  + L  IATAEH++V    +++LI  S GDLR+AI  +Q+A R+ S       +    I   A +VP SV++ F        D+S+   G+ N       S++  V  ++ EGYS+ Q+L+Q  D +I         TL+  QK+  SLV A+A+KAL DG DE++ + +I  R+ +
Sbjct:   24 QPWVEKYRPKTIDEVSAQEHTVAVLQKTLTST----NLPHMLFYGPPGTGKTSTILALARQLFGPDNFRNRVLELNASDERGISIVREKIKNFARQ--TPRAQAVASDGKTYPCPPYKIIILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRIIEPLASRCSKFRFTPLDSASSSSRLHHIATAEHIEVDSTVIDTLISTSVGDLRRAITYLQSASRLSSSTNPPTPITAADIQEIAGVVPDSVINDFASVLGVEMDNSMDVDGSQNQKSTGFESIKNKVKYLMREGYSATQILSQLHDLIILHP------TLNGRQKSLCSLVFAEADKALCDGADEELWVLEIGLRVQK 368          
BLAST of Gcaud1784.t1 vs. uniprot
Match: A0A165HC63_9APHY (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165HC63_9APHY)

HSP 1 Score: 314 bits (804), Expect = 7.230e-102
Identity = 175/363 (48.21%), Postives = 234/363 (64.46%), Query Frame = 0
Query:    6 QLWVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQLAVSSNVNTKRSDGKTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNSLPLEAMKAYLAKIATAEHVKVSDETLESLIEASEGDLRKAINTMQTAQRIQ--SDAELDIDS--ISAAACLVPPSVVDTF----------------DSSITAKGASNASVRKAVDEILVEGYSSGQLLTQYADRLIGRRSSSGVGTLSDLQKAAISLVIADAEKALIDGCDEKVQLYDIASRISRIANT 348
            Q WVEKYRP+ + +V+ QE  VA L+K +       DLPH+L YGPPGTGKTST LAL R L+GP N+RSRVLELNASDERGI +VR+KIK FA+    + V    SDGKTYPCPPYK+IILDEAD++T DAQ ALRR ME ++R+TRF ++CNY++RII PLASRC+KFRF  L   +    LA+IA AE+V V+DE + +LI  S GDLR++I  +Q+A R+   +D   DI S  I   A ++P  V+  F                D    ++  S   VR  V EI+ +GYS+ Q+L+Q  D +I         TLS  QK+  +LV A+A+KAL DG DE++ + ++  R+ +  +T
Sbjct:   22 QPWVEKYRPQTIDDVSAQEHTVAVLRKTLTS----SDLPHMLFYGPPGTGKTSTILALARQLYGPDNFRSRVLELNASDERGISIVREKIKNFARQTPRAQVIA--SDGKTYPCPPYKIIILDEADSMTQDAQAALRRIMENYARITRFCLVCNYVTRIIEPLASRCSKFRFKPLDPASTSTRLAQIAAAENVSVADEVITALINTSNGDLRRSITYLQSASRLSMSTDPPTDITSNDIQEIAGVIPNPVIHDFAKILGVEIISVDATDVDDGADSRAKSYDGVRNKVKEIIRQGYSASQILSQLHDLVIEHP------TLSARQKSRCALVFAEADKALCDGADEELWVLEVGLRVYKALST 372          
The following BLAST results are available for this feature:
BLAST of Gcaud1784.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUH7_9FLOR6.170e-19779.61Replication factor C subunit 4 n=1 Tax=Gracilariop... [more]
R7Q2F6_CHOCR6.860e-16166.38AAA domain-containing protein n=1 Tax=Chondrus cri... [more]
UPI001E1D2BC39.210e-12558.26replication factor C subunit 2-like n=1 Tax=Mercen... [more]
A0A5J4YXB4_PORPP1.290e-11453.35Replication factor C subunit 2 n=1 Tax=Porphyridiu... [more]
A0A1X6P2U3_PORUM2.600e-10349.44AAA domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A4R0RJ17_9APHY6.130e-10347.21AAA domain-containing protein n=1 Tax=Steccherinum... [more]
D2VRF7_NAEGR2.130e-10249.44Predicted protein n=1 Tax=Naegleria gruberi TaxID=... [more]
A0A060S8B3_PYCCI5.440e-10247.95AAA domain-containing protein n=2 Tax=Trametes Tax... [more]
A0A5C3MP24_9AGAR7.000e-10248.46P-loop containing nucleoside triphosphate hydrolas... [more]
A0A165HC63_9APHY7.230e-10248.21p-loop containing nucleoside triphosphate hydrolas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 42..182
e-value: 2.1E-13
score: 60.5
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 46..176
e-value: 1.7E-15
score: 57.6
NoneNo IPR availableGENE3D1.20.272.10coord: 247..345
e-value: 7.8E-18
score: 66.5
NoneNo IPR availableGENE3D1.10.8.60coord: 183..245
e-value: 1.7E-13
score: 52.0
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 5..344
NoneNo IPR availablePANTHERPTHR11669:SF20REPLICATION FACTOR C SUBUNIT 4coord: 5..344
NoneNo IPR availableCDDcd18140HLD_clamp_RFCcoord: 180..226
e-value: 1.1077E-12
score: 60.6205
NoneNo IPR availableCDDcd00009AAAcoord: 23..172
e-value: 3.51648E-22
score: 89.5127
IPR013748Replication factor C, C-terminalPFAMPF08542Rep_fac_Ccoord: 248..340
e-value: 3.2E-9
score: 37.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..179
e-value: 3.2E-51
score: 175.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..232
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 250..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_338_length_29361_cov_4.567031contigNODE_338_length_29361_cov_4.567031:24191..25270 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1784.t1Gcaud1784.t1Gracilaria caudata M_176_S67 malemRNANODE_338_length_29361_cov_4.567031 24191..25270 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1784.t1 ID=Gcaud1784.t1|Name=Gcaud1784.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=360bp
MKDGAQLWVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYG
PPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQ
LAVSSNVNTKRSDGKTYPCPPYKVIILDEADAITTDAQTALRRTMEAHSR
VTRFIIICNYISRIIGPLASRCAKFRFNSLPLEAMKAYLAKIATAEHVKV
SDETLESLIEASEGDLRKAINTMQTAQRIQSDAELDIDSISAAACLVPPS
VVDTFDSSITAKGASNASVRKAVDEILVEGYSSGQLLTQYADRLIGRRSS
SGVGTLSDLQKAAISLVIADAEKALIDGCDEKVQLYDIASRISRIANTAD
GDVTALRKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR013748Rep_factorC_C
IPR027417P-loop_NTPase
IPR008921DNA_pol3_clamp-load_cplx_C