Gcaud1763.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1763.t1
Unique NameGcaud1763.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length418
Homology
BLAST of Gcaud1763.t1 vs. uniprot
Match: A0A2V3IPH1_9FLOR (Eukaryotic initiation factor 4A-III n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPH1_9FLOR)

HSP 1 Score: 728 bits (1880), Expect = 1.090e-263
Identity = 366/417 (87.77%), Postives = 392/417 (94.00%), Query Frame = 0
Query:    1 MSGIGSASPRYAPTSPTASDSTFTRRQAEKATFNINREVQVFKSFDDMPLKAPLLRGIYSIGFDMPSAIQQRCIVPMIRGHDVVAQAQSGTGKTAMIAIVALQLASATAAHTQVLVLSPTRELAVQTHRNVELLGEFLCIGSHACVGGKKVGDDIRRLANGGVHIVSGTPGRVYDMIQRNVLHTNKLRVLFIDEADEMLTMGFKEQVYDIYRYAPPTVQVVLVSATLPSDVLEMSEKFMTQPISVLVKRDGLSLDGIRQFYVDVEQEEWKFDTLCDLYETLTITQAVIFCNTRRKVEWLAKKMKEGNFVVTAMHGDMKQKERDSVMDSFRAGDFRVLIATDVWSRGIDVQQVSLVINYDVPLQQESYLHRIGRSGRFGRKGVAITFARFSDKKEMSAIEKFYGIRIRELPADVDKYL 417
            MSG G+ASPRY PTSPTASDSTFT+RQAE ATFN+NR VQ+F +FDDM LK PLLRG+YS+GFD PSAIQQRCIVPMIRGHDVVAQAQSGTGKTAMIAIVAL LASA   H QVLVLSPTRELAVQTHRNVE LGEFL I +HAC+GGKKVGDDIRRL++GGVHIVSGTPGRV+DMIQRN+LH NKLRVLFIDEADEMLTMGFKEQVYDIYRYAPPTVQVVLVSATLPSDV+EM+EKFMTQPISVLVKRDGLSLDGIRQFYVDVEQEEWKFDTLCDLYETLTITQAVIFCNTRRKVEWLA KM++ NFVVT++HGDM Q +RD+VM++FRAGD+RVLIATDVWSRGIDVQQVSLVINYDVPL QESYLHRIGRSGRFGRKGVAITFAR SD++ M AIEKFYGIRIRELPADVDKYL
Sbjct:    1 MSGQGTASPRYPPTSPTASDSTFTKRQAEPATFNVNRHVQLFTNFDDMRLKPPLLRGVYSLGFDKPSAIQQRCIVPMIRGHDVVAQAQSGTGKTAMIAIVALHLASAAFNHVQVLVLSPTRELAVQTHRNVEHLGEFLSIRAHACIGGKKVGDDIRRLSHGGVHIVSGTPGRVFDMIQRNLLHMNKLRVLFIDEADEMLTMGFKEQVYDIYRYAPPTVQVVLVSATLPSDVMEMAEKFMTQPISVLVKRDGLSLDGIRQFYVDVEQEEWKFDTLCDLYETLTITQAVIFCNTRRKVEWLANKMRDSNFVVTSIHGDMNQNDRDTVMEAFRAGDYRVLIATDVWSRGIDVQQVSLVINYDVPLHQESYLHRIGRSGRFGRKGVAITFARSSDRRAMGAIEKFYGIRIRELPADVDKYL 417          
BLAST of Gcaud1763.t1 vs. uniprot
Match: R7QAB1_CHOCR (Eukaryotic translation initiation factor 4A n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAB1_CHOCR)

HSP 1 Score: 526 bits (1354), Expect = 4.430e-183
Identity = 268/404 (66.34%), Postives = 317/404 (78.47%), Query Frame = 0
Query:   15 SPTASDSTF-TRRQAEKATFNINREVQVFKSFDDMPLKAPLLRGIYSIGFDMPSAIQQRCIVPMIRGHDVVAQAQSGTGKTAMIAIVALQLASATAAHTQVLVLSPTRELAVQTHRNVELLGEFLCIGSHACVGGKKVGDDIRRLANGGVHIVSGTPGRVYDMIQRNVLHTNKLRVLFIDEADEMLTMGFKEQVYDIYRYAPPTVQVVLVSATLPSDVLEMSEKFMTQPISVLVKRDGLSLDGIRQFYVDVEQEEWKFDTLCDLYETLTITQAVIFCNTRRKVEWLAKKMKEGNFVVTAMHGDMKQKERDSVMDSFRAGDFRVLIATDVWSRGIDVQQVSLVINYDVPLQQESYLHRIGRSGRFGRKGVAITFARFSDKKEMSAIEKFYGIRIRELPADVDKYL 417
            SP  S+S+  T R AE A F+ +R++ V +SF+ M LK  LLRGIYS G+  PS IQQ C++P+I+  DV+AQAQSGTGKTAM+A V+LQ+AS  +   QVL+LSPTREL+ QT  N+  LGE+  +    CVGG +VG+D+R L  GGVHIVSGTPGRV+DMIQR  L   KL+ L +DEAD+M   GFKEQVYDIYR  P  VQV LVSATLP +V+EMSEKFMT P+SVLVKRDGLSLDGI QFYVDVEQE+WKF+TLCDLYETLTITQAVIFCNT+RKVEWL KKM E  F V +M G M Q+ R+ VMDSFR G  RVLIATD+WSRGIDVQ VSLVINYDVP +QE+YLHRIGRSGRFGRKGVAITF    D   + +IE+FYG++I ELP++VD YL
Sbjct:   51 SPAGSESSRGTARSAETANFSTSRKITVHRSFESMRLKPNLLRGIYSAGYYAPSPIQQHCVMPLIKKRDVIAQAQSGTGKTAMLAFVSLQIASPDSQAVQVLILSPTRELSKQTEGNIRSLGEYTTLKCLGCVGGNRVGEDMRALGKGGVHIVSGTPGRVFDMIQRGALDCRKLKTLIVDEADQMFGSGFKEQVYDIYRSMPADVQVALVSATLPDEVVEMSEKFMTDPVSVLVKRDGLSLDGIWQFYVDVEQEKWKFETLCDLYETLTITQAVIFCNTKRKVEWLTKKMTENGFTVMSMSGSMTQERRNEVMDSFRKGHSRVLIATDIWSRGIDVQHVSLVINYDVPNEQEAYLHRIGRSGRFGRKGVAITFVTSGDMGALRSIERFYGMQILELPSNVDDYL 454          
BLAST of Gcaud1763.t1 vs. uniprot
Match: E1Z284_CHLVA (Uncharacterized protein n=2 Tax=Chlorella clade TaxID=2511126 RepID=E1Z284_CHLVA)

HSP 1 Score: 503 bits (1294), Expect = 9.160e-175
Identity = 245/381 (64.30%), Postives = 303/381 (79.53%), Query Frame = 0
Query:   33 FNINREVQVFKSFDDMPLKAPLLRGIYSIGFDMPSAIQQRCIVPMIRGHDVVAQAQSGTGKTAMIAIVALQLASATAAHTQVLVLSPTRELAVQTHRNVELLGEFLCIGSHACVGGKKVGDDIRRLANGGVHIVSGTPGRVYDMIQRNVLHTNKLRVLFIDEADEMLTMGFKEQVYDIYRYAPPTVQVVLVSATLPSDVLEMSEKFMTQPISVLVKRDGLSLDGIRQFYVDVEQEEWKFDTLCDLYETLTITQAVIFCNTRRKVEWLAKKMKEGNFVVTAMHGDMKQKERDSVMDSFRAGDFRVLIATDVWSRGIDVQQVSLVINYDVPLQQESYLHRIGRSGRFGRKGVAITFARFSDKKEMSAIEKFYGIRIRELPADV 413
            F  ++ V+V  SFD M L+  LLRGIY  GF+ PSAIQQR ++P+ +G DV+AQAQSGTGKT++IAI   Q+   T    Q LVLSPTRELA QT +N+  +G+ + + +HAC+GGK VGDDIR+L NG VHIVSGTPGRV+DMI+R  L T  ++ L +DEADEML  GFKEQ+YDIYRY PP  QVVLVSATLP +VLEM+ KFMT P+ +LVKRD L+L+GI+QF+V VE+EEWKFDTLCDLY+TLTITQAVIFCNT+RKV+WL +KM++ NF V+AMHGDM QKER+++MD FR G  RVLI TDVW+RG+DVQQVSLVINYD+P  +E Y+HRIGRSGRFGRKGVAI F +  D K +  IE+FY  +I E+P +V
Sbjct:   19 FETSKGVKVVSSFDAMGLREQLLRGIYQFGFEKPSAIQQRAVLPITQGRDVIAQAQSGTGKTSLIAITLCQMLDTTLREVQALVLSPTRELATQTEKNILAIGDHMAVQAHACIGGKSVGDDIRKLENG-VHIVSGTPGRVFDMIKRRSLRTRNIKTLVLDEADEMLNKGFKEQIYDIYRYLPPETQVVLVSATLPHEVLEMTHKFMTDPVRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRQNNFTVSAMHGDMPQKEREAIMDEFRKGATRVLITTDVWARGLDVQQVSLVINYDLPNSRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQFYSTQIDEMPMNV 398          
BLAST of Gcaud1763.t1 vs. uniprot
Match: M2XSU4_GALSU (Eukaryotic translation initiation factor eIF-4A n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XSU4_GALSU)

HSP 1 Score: 501 bits (1290), Expect = 3.710e-174
Identity = 243/381 (63.78%), Postives = 305/381 (80.05%), Query Frame = 0
Query:   33 FNINREVQVFKSFDDMPLKAPLLRGIYSIGFDMPSAIQQRCIVPMIRGHDVVAQAQSGTGKTAMIAIVALQLASATAAHTQVLVLSPTRELAVQTHRNVELLGEFLCIGSHACVGGKKVGDDIRRLANGGVHIVSGTPGRVYDMIQRNVLHTNKLRVLFIDEADEMLTMGFKEQVYDIYRYAPPTVQVVLVSATLPSDVLEMSEKFMTQPISVLVKRDGLSLDGIRQFYVDVEQEEWKFDTLCDLYETLTITQAVIFCNTRRKVEWLAKKMKEGNFVVTAMHGDMKQKERDSVMDSFRAGDFRVLIATDVWSRGIDVQQVSLVINYDVPLQQESYLHRIGRSGRFGRKGVAITFARFSDKKEMSAIEKFYGIRIRELPADV 413
            F  +REV+   SF+++ LK  LLRGIYS GF+ PSAIQQR + P ++G DV+AQAQSGTGKTAM++++AL          QVL+LSPTRELA QT   +  LGEF+ +  HAC+GGK +G+DIR L + GVH+VSGTPGRV+DMIQR  L T  LR+  IDEADEML+ GFKEQ+Y++YR+ PP++QV+LVSATLP DVLEM+ KFMT P+ +LVKRD L+L+GI+QF+V VE+EEWKFDTLCDLYETLTITQAVIFCN++RKV+WL  K++E NF V++MHGDMKQ ERD+VM  FR+G  RVLIATD+W+RGIDVQQVSLVINYD+PL +E+Y+HRIGRSGRFGR+GVAI F    D   +  IE+FY  +I E+P +V
Sbjct:   19 FETSREVKAIPSFEELGLKKELLRGIYSYGFERPSAIQQRALAPALKGRDVIAQAQSGTGKTAMLSVIALNSVDIKTREVQVLILSPTRELAQQTQHTLLSLGEFMNVQCHACIGGKNLGEDIRTL-DYGVHVVSGTPGRVFDMIQRRNLRTRSLRLFIIDEADEMLSRGFKEQIYEVYRHLPPSIQVILVSATLPHDVLEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYETLTITQAVIFCNSKRKVDWLTSKLRENNFTVSSMHGDMKQSERDAVMAEFRSGKSRVLIATDIWARGIDVQQVSLVINYDIPLNRENYIHRIGRSGRFGRRGVAINFVTNEDVAMLRDIEQFYSTQIDEMPMNV 398          
BLAST of Gcaud1763.t1 vs. uniprot
Match: A0A7S4JW04_9STRA (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7S4JW04_9STRA)

HSP 1 Score: 503 bits (1296), Expect = 5.460e-174
Identity = 248/371 (66.85%), Postives = 297/371 (80.05%), Query Frame = 0
Query:   43 KSFDDMPLKAPLLRGIYSIGFDMPSAIQQRCIVPMIRGHDVVAQAQSGTGKTAMIAIVALQLASATAAHTQVLVLSPTRELAVQTHRNVELLGEFLCIGSHACVGGKKVGDDIRRLANGGVHIVSGTPGRVYDMIQRNVLHTNKLRVLFIDEADEMLTMGFKEQVYDIYRYAPPTVQVVLVSATLPSDVLEMSEKFMTQPISVLVKRDGLSLDGIRQFYVDVEQEEWKFDTLCDLYETLTITQAVIFCNTRRKVEWLAKKMKEGNFVVTAMHGDMKQKERDSVMDSFRAGDFRVLIATDVWSRGIDVQQVSLVINYDVPLQQESYLHRIGRSGRFGRKGVAITFARFSDKKEMSAIEKFYGIRIRELPADV 413
            KSFDD+ LK  LLRGIY+ GF+ PSAIQQR I P++RG DV+AQ+QSGTGKTA+ +I +LQ+        QVLVLSPTRELA QT R +  LG+F+ +  H C+GGK +G+D+R L  GGVHIVSGTPGRV+DMIQR  L T  L+VL IDEADEML  GFKEQ+YDIYRY PP+ QVVLVSATLP +VL+M+ KFMT P+ +LVKRD L+L+GI+QF+V VE+EEWKFDTLCDLY+TLTITQAVIFCNT+ KV+WLA+KMKE NF V AMHGDM QK+RD VM+ FR+G  RVLIATD+W RGIDVQQVSLVI YD+P  +E Y+HRIGRSGRFGRKGVAI F R  D   +  IE+FY  +I E+P +V
Sbjct:   99 KSFDDLKLKPALLRGIYAYGFERPSAIQQRAIRPIVRGRDVIAQSQSGTGKTAVFSIASLQMLDERVHDPQVLVLSPTRELAEQTQRVMRSLGDFMNVKVHRCIGGKSLGEDLRELQRGGVHIVSGTPGRVFDMIQRRTLQTRALKVLIIDEADEMLNKGFKEQIYDIYRYLPPSTQVVLVSATLPVEVLDMTRKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIFCNTKEKVDWLAEKMKENNFTVAAMHGDMTQKDRDGVMEEFRSGSSRVLIATDLWGRGIDVQQVSLVICYDLPTNRELYIHRIGRSGRFGRKGVAINFVRTEDVPTLRDIEQFYSTQIDEMPLNV 469          
BLAST of Gcaud1763.t1 vs. uniprot
Match: A0A2N9I2Y3_FAGSY (Uncharacterized protein n=5 Tax=Fagaceae TaxID=3503 RepID=A0A2N9I2Y3_FAGSY)

HSP 1 Score: 501 bits (1289), Expect = 6.750e-174
Identity = 245/385 (63.64%), Postives = 305/385 (79.22%), Query Frame = 0
Query:   29 EKATFNINREVQVFKSFDDMPLKAPLLRGIYSIGFDMPSAIQQRCIVPMIRGHDVVAQAQSGTGKTAMIAIVALQLASATAAHTQVLVLSPTRELAVQTHRNVELLGEFLCIGSHACVGGKKVGDDIRRLANGGVHIVSGTPGRVYDMIQRNVLHTNKLRVLFIDEADEMLTMGFKEQVYDIYRYAPPTVQVVLVSATLPSDVLEMSEKFMTQPISVLVKRDGLSLDGIRQFYVDVEQEEWKFDTLCDLYETLTITQAVIFCNTRRKVEWLAKKMKEGNFVVTAMHGDMKQKERDSVMDSFRAGDFRVLIATDVWSRGIDVQQVSLVINYDVPLQQESYLHRIGRSGRFGRKGVAITFARFSDKKEMSAIEKFYGIRIRELPADV 413
            E   F  +REVQV  SF+DM LK  LLRGIYS GFD PSAIQQR +VP++ G DV+AQAQSGTGKT+MIA+   Q         Q L+LSPTRELA QT + +  +G+ L I  HAC+GGK VG+DIR+L +G VHIVSGTPGRV DMI+R  L T  +++L +DE+DEML+ GFK+Q+YD+YRY PP +QVVL+SATLP ++LEM+ KFMT PI +LVKRD L+L+GI+QF+V VE+EEWKFDTLCDLY+TLTITQAVIFCNT+RKV+WL +KM+  NF V++MHGDM QKERD++M  FRAG+ RVLI TDVW+RG+DVQQVSLVINYD+P  +E Y+HRIGRSGRFGRKGVAI F +  D K +  IE++Y  +I E+P +V
Sbjct:   22 EALEFETSREVQVVTSFNDMGLKEELLRGIYSYGFDKPSAIQQRAVVPILLGRDVIAQAQSGTGKTSMIALTVCQKVDTATREIQALILSPTRELAAQTEKVILAMGDHLNIQVHACIGGKSVGEDIRKLEHG-VHIVSGTPGRVCDMIKRRTLRTRNIKILILDESDEMLSRGFKDQIYDLYRYLPPELQVVLISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRSNNFTVSSMHGDMPQKERDAIMAEFRAGETRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNV 405          
BLAST of Gcaud1763.t1 vs. uniprot
Match: A0A7S2ZS82_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZS82_9RHOD)

HSP 1 Score: 500 bits (1288), Expect = 8.020e-174
Identity = 240/385 (62.34%), Postives = 310/385 (80.52%), Query Frame = 0
Query:   29 EKATFNINREVQVFKSFDDMPLKAPLLRGIYSIGFDMPSAIQQRCIVPMIRGHDVVAQAQSGTGKTAMIAIVALQLASATAAHTQVLVLSPTRELAVQTHRNVELLGEFLCIGSHACVGGKKVGDDIRRLANGGVHIVSGTPGRVYDMIQRNVLHTNKLRVLFIDEADEMLTMGFKEQVYDIYRYAPPTVQVVLVSATLPSDVLEMSEKFMTQPISVLVKRDGLSLDGIRQFYVDVEQEEWKFDTLCDLYETLTITQAVIFCNTRRKVEWLAKKMKEGNFVVTAMHGDMKQKERDSVMDSFRAGDFRVLIATDVWSRGIDVQQVSLVINYDVPLQQESYLHRIGRSGRFGRKGVAITFARFSDKKEMSAIEKFYGIRIRELPADV 413
            ++  F  + +V+   SFD M LK  LLRG+Y+ GF+ PSAIQQR + P+++G DV+AQAQSGTGKTAM+++V+LQ  +  A   Q L+LSPTRELAVQT + +  LGE++ +  H+C+GGK +G+DIRRL + GVH VSGTPGRV+DMI+R  L T  +++  +DEADEML+ GFKEQ+YDIYRY PP +QVVLVSAT+PSD+LE++ KFMT P+ +LVKRD L+L+GI+QF+V V++E+WKFDTLCDLYETLTITQAV+FCNT+RKVEWLA K+KE NF V++MHGDM+QKERD +M  FR+G  RVLIATDVW+RG+DVQQVSLVINYD+P  +E+Y+HRIGRSGRFGRKGVAI F    D   +  IE+FY  +I E+P +V
Sbjct:   17 DRTNFETSSQVRPVVSFDKMNLKDELLRGLYAYGFEKPSAIQQRAVAPIVKGRDVIAQAQSGTGKTAMMSLVSLQRINTKARDVQALILSPTRELAVQTQKTMMSLGEYMSVQCHSCIGGKSIGEDIRRL-DSGVHAVSGTPGRVFDMIKRGNLRTKAVKLFILDEADEMLSRGFKEQIYDIYRYLPPGIQVVLVSATMPSDLLEITNKFMTDPVRILVKRDELTLEGIKQFFVAVQKEDWKFDTLCDLYETLTITQAVVFCNTKRKVEWLATKLKEANFTVSSMHGDMEQKERDEIMSEFRSGTSRVLIATDVWARGLDVQQVSLVINYDLPDNRENYIHRIGRSGRFGRKGVAINFVADDDLPNLHDIEQFYSTQIDEMPMNV 400          
BLAST of Gcaud1763.t1 vs. uniprot
Match: A0A061SBT7_9CHLO (ATP-dependent RNA helicase n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SBT7_9CHLO)

HSP 1 Score: 499 bits (1286), Expect = 2.380e-173
Identity = 241/385 (62.60%), Postives = 306/385 (79.48%), Query Frame = 0
Query:   29 EKATFNINREVQVFKSFDDMPLKAPLLRGIYSIGFDMPSAIQQRCIVPMIRGHDVVAQAQSGTGKTAMIAIVALQLASATAAHTQVLVLSPTRELAVQTHRNVELLGEFLCIGSHACVGGKKVGDDIRRLANGGVHIVSGTPGRVYDMIQRNVLHTNKLRVLFIDEADEMLTMGFKEQVYDIYRYAPPTVQVVLVSATLPSDVLEMSEKFMTQPISVLVKRDGLSLDGIRQFYVDVEQEEWKFDTLCDLYETLTITQAVIFCNTRRKVEWLAKKMKEGNFVVTAMHGDMKQKERDSVMDSFRAGDFRVLIATDVWSRGIDVQQVSLVINYDVPLQQESYLHRIGRSGRFGRKGVAITFARFSDKKEMSAIEKFYGIRIRELPADV 413
            E   F  ++ V+V  SF+DM +K  LLRG+Y  GF+ PSAIQQR ++P++ G DV+AQAQSGTGKT+MI++   Q    +    Q LVLSPTRELA QT + V  +G+F+ +  H+C+GGK +GDDIR+L NG VHIVSGTPGRV+DMI+R VL T  ++ L +DEADEML+ GFKEQ+YD+YRY PP  QVVLVSATLP +VLEM+ KFMT P+ VLVKRD L+L+GI+QF+V VE+EEWKFDTLCDLY+TLTITQAVIFCNT+RKV+WL +KM++ NF V++MHGDM QKERD++M  FR G+ RVLI+TDVW+RG+DVQQVSLVINYD+P  +E Y+HRIGRSGRFGRKGVAI F R  D + +  IE++Y  +I E+P +V
Sbjct:   28 EGLVFETSKSVKVVSSFEDMGIKNDLLRGVYEYGFEKPSAIQQRAVMPIVSGRDVIAQAQSGTGKTSMISLALCQKLDTSLREVQALVLSPTRELATQTEKVVLAIGDFINVQVHSCIGGKSIGDDIRKLENG-VHIVSGTPGRVFDMIKRRVLRTRAIKTLVLDEADEMLSQGFKEQIYDVYRYLPPDTQVVLVSATLPHEVLEMTHKFMTDPVRVLVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRQNNFTVSSMHGDMPQKERDAIMGEFRGGETRVLISTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVRNDDVRILRDIEQYYSTQIDEMPMNV 411          
BLAST of Gcaud1763.t1 vs. uniprot
Match: A0A5B8MUY3_9CHLO (DEAD-box ATP-dependent RNA helicase n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MUY3_9CHLO)

HSP 1 Score: 498 bits (1283), Expect = 3.230e-173
Identity = 238/389 (61.18%), Postives = 309/389 (79.43%), Query Frame = 0
Query:   25 RRQAEKATFNINREVQVFKSFDDMPLKAPLLRGIYSIGFDMPSAIQQRCIVPMIRGHDVVAQAQSGTGKTAMIAIVALQLASATAAHTQVLVLSPTRELAVQTHRNVELLGEFLCIGSHACVGGKKVGDDIRRLANGGVHIVSGTPGRVYDMIQRNVLHTNKLRVLFIDEADEMLTMGFKEQVYDIYRYAPPTVQVVLVSATLPSDVLEMSEKFMTQPISVLVKRDGLSLDGIRQFYVDVEQEEWKFDTLCDLYETLTITQAVIFCNTRRKVEWLAKKMKEGNFVVTAMHGDMKQKERDSVMDSFRAGDFRVLIATDVWSRGIDVQQVSLVINYDVPLQQESYLHRIGRSGRFGRKGVAITFARFSDKKEMSAIEKFYGIRIRELPADV 413
            RR+AE A F +++ V V  +FD M L+  LLRGIY  GFD PSAIQQR +VP+I+G DV+AQAQSGTGKT+MI++   Q  +      Q L++SPTRELA QT + +  +G+F+ + +H C+GGK VG+DIR+L +G VH+VSGTPGR++DMI+R  L T ++++L +DEADEML  GFKEQ++DIYRY PP  QVVLVSATLP DVL+++EKFMT P+ +LVKRD L+L+GI+QF+V VE+EEWKFDTLCDLY+TLTITQAVIFCN R+KVEWLA+KM+  NF V+AMHGDM QKERD +M  FR+G  RVLI TD+W+RG+DVQQVSLVINYD+P+ +E Y+HRIGRSGRFG+KGVA+ F +  D   +  IE++Y  +I E+P +V
Sbjct:    3 RREAEGADFEVSQGVSVVDTFDKMGLREDLLRGIYEYGFDKPSAIQQRAVVPIIKGRDVIAQAQSGTGKTSMISLAVCQNINTETREVQALIVSPTRELATQTDKVILAIGDFMNVQTHCCIGGKSVGEDIRKLDHG-VHVVSGTPGRLFDMIKRRTLRTRQIKLLILDEADEMLNRGFKEQIFDIYRYLPPETQVVLVSATLPQDVLQVTEKFMTDPLRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNKRKKVEWLAEKMRANNFTVSAMHGDMPQKERDLIMSDFRSGTSRVLITTDIWARGLDVQQVSLVINYDLPVNRELYIHRIGRSGRFGKKGVAVNFVKDDDLNTLKDIEQYYSTQIDEMPMNV 390          
BLAST of Gcaud1763.t1 vs. uniprot
Match: A0A1X6NIK1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NIK1_PORUM)

HSP 1 Score: 495 bits (1274), Expect = 3.210e-172
Identity = 250/366 (68.31%), Postives = 297/366 (81.15%), Query Frame = 0
Query:   48 MPLKAPLLRGIYSIGFDMPSAIQQRCIVPMIRGHDVVAQAQSGTGKTAMIAIVALQLASATAAHTQVLVLSPTRELAVQTHRNVELLGEFLCIGSHACVGGKKVGDDIRRLANGGVHIVSGTPGRVYDMIQRNVLHTNKLRVLFIDEADEMLTMGFKEQVYDIYRYAPPTVQVVLVSATLPSDVLEMSEKFMTQPISVLVKRDGLSLDGIRQFYVDVEQEEWKFDTLCDLYETLTITQAVIFCNTRRKVEWLAKKMKEGNFVVTAMHGDMKQKERDSVMDSFRAGDFRVLIATDVWSRGIDVQQVSLVINYDVPLQQESYLHRIGRSGRFGRKGVAITFARFSDKKEMSAIEKFYGIRIRELPADV 413
            M L+  LLRG+Y+ GFD PSAIQQR +VP + G DV+AQAQSGTGKTAMIA++ALQ A+A+A   QVL LSPTRELA QT R+   L EF+ +G HACVGG+ VG DIRRL  GGVH+VSGTPGRVYDM+QR VL   ++++L +DEADEML MGFKEQ+YDIYR  P  VQV LVSATLP+DVL M+ +FMT+P+ VLVKRD L+L+GI+QF+V VE+EEWKFDTLCDLYETLTITQAVIF NTR KV+WLA KM+E +FVV AMHG+M+Q ERD VM  FRAG  RVLIATDVW+RGIDV+QVSLVINYD+P+ +E+YLHRIGRSGRFGRKGVAI F    D   +  IE+FY  +I E+P  V
Sbjct:    1 MGLQPDLLRGLYAFGFDKPSAIQQRAMVPALAGRDVIAQAQSGTGKTAMIALLALQTAAASAREVQVLTLSPTRELATQTARDATSLAEFMTVGVHACVGGRAVGADIRRLEAGGVHVVSGTPGRVYDMMQRRVLSVKRVKMLVLDEADEMLGMGFKEQIYDIYRGLPADVQVALVSATLPADVLSMTSQFMTEPVRVLVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYETLTITQAVIFVNTRAKVDWLATKMRESHFVVAAMHGEMRQAERDGVMADFRAGKSRVLIATDVWARGIDVRQVSLVINYDLPVGREAYLHRIGRSGRFGRKGVAINFVCEGDVTALRDIEQFYSTQIDEMPMAV 366          
The following BLAST results are available for this feature:
BLAST of Gcaud1763.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPH1_9FLOR1.090e-26387.77Eukaryotic initiation factor 4A-III n=1 Tax=Gracil... [more]
R7QAB1_CHOCR4.430e-18366.34Eukaryotic translation initiation factor 4A n=1 Ta... [more]
E1Z284_CHLVA9.160e-17564.30Uncharacterized protein n=2 Tax=Chlorella clade Ta... [more]
M2XSU4_GALSU3.710e-17463.78Eukaryotic translation initiation factor eIF-4A n=... [more]
A0A7S4JW04_9STRA5.460e-17466.85Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]
A0A2N9I2Y3_FAGSY6.750e-17463.64Uncharacterized protein n=5 Tax=Fagaceae TaxID=350... [more]
A0A7S2ZS82_9RHOD8.020e-17462.34Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
A0A061SBT7_9CHLO2.380e-17362.60ATP-dependent RNA helicase n=2 Tax=Tetraselmis sp.... [more]
A0A5B8MUY3_9CHLO3.230e-17361.18DEAD-box ATP-dependent RNA helicase n=2 Tax=Chloro... [more]
A0A1X6NIK1_PORUM3.210e-17268.31Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 79..250
e-value: 0.0089
score: 25.2
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 62..260
e-value: 2.9E-52
score: 189.6
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 74..245
score: 26.378481
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 297..378
e-value: 7.5E-34
score: 128.4
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 270..378
e-value: 4.9E-31
score: 107.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 256..417
score: 24.969109
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 68..232
e-value: 2.6E-38
score: 131.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 32..252
e-value: 1.3E-60
score: 206.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 253..416
e-value: 1.7E-55
score: 188.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 70..131
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 112..399
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 5..25
NoneNo IPR availablePANTHERPTHR47958:SF26EUKARYOTIC INITIATION FACTOR 4A-IIIcoord: 23..408
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 23..408
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 257..386
e-value: 2.86805E-61
score: 192.722
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 191..199
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 43..71
score: 9.513563

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_2664_length_5018_cov_3.423584contigNODE_2664_length_5018_cov_3.423584:25..1278 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1763.t1Gcaud1763.t1Gracilaria caudata M_176_S67 malemRNANODE_2664_length_5018_cov_3.423584 25..1278 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1763.t1 ID=Gcaud1763.t1|Name=Gcaud1763.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=418bp
MSGIGSASPRYAPTSPTASDSTFTRRQAEKATFNINREVQVFKSFDDMPL
KAPLLRGIYSIGFDMPSAIQQRCIVPMIRGHDVVAQAQSGTGKTAMIAIV
ALQLASATAAHTQVLVLSPTRELAVQTHRNVELLGEFLCIGSHACVGGKK
VGDDIRRLANGGVHIVSGTPGRVYDMIQRNVLHTNKLRVLFIDEADEMLT
MGFKEQVYDIYRYAPPTVQVVLVSATLPSDVLEMSEKFMTQPISVLVKRD
GLSLDGIRQFYVDVEQEEWKFDTLCDLYETLTITQAVIFCNTRRKVEWLA
KKMKEGNFVVTAMHGDMKQKERDSVMDSFRAGDFRVLIATDVWSRGIDVQ
QVSLVINYDVPLQQESYLHRIGRSGRFGRKGVAITFARFSDKKEMSAIEK
FYGIRIRELPADVDKYL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif