Gcaud1732.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1732.t1
Unique NameGcaud1732.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length181
Homology
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BLAST of Gcaud1732.t1 vs. uniprot
Match: A0A2V3J0Q9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0Q9_9FLOR)

HSP 1 Score: 189 bits (479), Expect = 3.880e-58
Identity = 87/173 (50.29%), Postives = 124/173 (71.68%), Query Frame = 0 
Query:    6 MHRPLRPPPGFERFHSEESVFPGIHANWKKKRTLKDYTDVAKQAWRLYRHSYIYDPEMAEFEKKILEREDMIIQRQAKAXXXXXXXXXXXXXXXXXXXXERITEEFHARRPEAEALMKDRVNVLREALTEFAEGYNEGVEGQFSFFEDSEDDDVDYPPHVAKEGNKPVIYRNE 178
            MHRPL+PP G+E FHSE++VFPG+  +WKKK +L+DY D  K+AWRLYRHS+I+DPEMA FE+ +L+RE++IIQRQAK                     ++I +E   ++PEA+  +KDRVN+LRE+L+EF+ GYN+G+EG+F+FF  SE D+  YP  V +  NKP++Y ++
Sbjct:    1 MHRPLKPPAGYEHFHSEQAVFPGLKRSWKKKESLQDYIDGFKRAWRLYRHSFIHDPEMAAFEEDMLKREELIIQRQAKVVVDKTEKAFKRGQQAAQDVSQQIAQELKDKKPEAQEFLKDRVNILRESLSEFSHGYNDGLEGRFNFFNVSEGDE--YPNDVVRRDNKPIVYNSD 171
The following BLAST results are available for this feature:
BLAST of Gcaud1732.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J0Q9_9FLOR3.880e-5850.29Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_1010_length_15078_cov_4.529993contigNODE_1010_length_15078_cov_4.529993:12298..12840 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1732.t1Gcaud1732.t1Gracilaria caudata M_176_S67 malemRNANODE_1010_length_15078_cov_4.529993 12298..12840 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1732.t1 ID=Gcaud1732.t1|Name=Gcaud1732.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=181bp
MEWEGMHRPLRPPPGFERFHSEESVFPGIHANWKKKRTLKDYTDVAKQAW
RLYRHSYIYDPEMAEFEKKILEREDMIIQRQAKAILDRSEANFKRNRKAV
RDMSERITEEFHARRPEAEALMKDRVNVLREALTEFAEGYNEGVEGQFSF
FEDSEDDDVDYPPHVAKEGNKPVIYRNEKI*
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