Gcaud1720.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gcaud1720.t1
Unique Name	Gcaud1720.t1
Type	polypeptide
Organism	Gracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length	446

Homology

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BLAST of Gcaud1720.t1 vs. uniprot
Match: A0A2V3J200_9FLOR (Histidine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J200_9FLOR)

HSP 1 Score: 614 bits (1584), Expect = 1.040e-217
Identity = 298/432 (68.98%), Postives = 357/432 (82.64%), Query Frame = 0

Query:    1 MVASSLVRGCRDILGRTASHRRHLVNSFAALCSVYNFHEIETPILERANLFSQSLGTGSEVISSEMYHIAETNPALALRPEGTAGVARALKDVGLLKCAPVYGTRVWYAGPMFRHERPQKGRYRQFWQMGVEAVGDDSVSTDLDTIGLAAQYLSSIQCNTKLRLNTLGNKDTRKAYNDALKQFLKSRYWALSSLSRGRYDSGNCMRILDSKLPEDSDVMSTAPQLRDFVDEVEKERFKEVCSLLEEARIPFLIDDRLVRGLEYYTSTAFEFLGPGGKAVCGGGRYTNVCGASGIGFAIGLDRIESEQCEGIASYDRNLENGVVVIGLSRTAERSDCEIGRTARRVVKEFRDRGIKCVGRLEGGRLSKMVGRAARSGAMAVVVLGEQDLDQATARVKFVSADCEQDPQQKSLVDVVDVVCRRARGEGETADDG 432
            MVA+  VRGCRDI    A+HRR  VN FAALCS+YNFHEIETPILERA LF++SLG  S+VI+SEMYH+AET+P L LRPEGTAGVARAL+DVGLLKCAPVYGTRVWYAG MFRHERPQ GRYRQFWQ+GVEA+GD+SV TD+D I LAA+Y+  I+C TKLR+NTLG K  RK YN+ALK+FLK RYW +SSLSR RYDSGNCMRILDSKL ED DVM+ AP+L +FV+E E+ERF+EVCSLL+EA +PF +D+RLVRGL+YYTSTAFEF G  GKAVC GGRY +VCGASG+GFA+GLDR+E  +C+GI SY+  L+ GVVVIGLS++AERS CE+GR AR V K FR+RG+KCV RLEGGRLSK+VGRA R GA +VVV+GE+DL + TA+VK+VS +   +P++ +  DVV  V  R + E    D+G
Sbjct:    1 MVANGAVRGCRDIFALAAAHRRECVNKFAALCSIYNFHEIETPILERAELFARSLGPTSDVITSEMYHVAETDPQLVLRPEGTAGVARALRDVGLLKCAPVYGTRVWYAGQMFRHERPQHGRYRQFWQLGVEAIGDESVITDVDVIVLAAKYMQWIECKTKLRVNTLGKKQNRKQYNEALKEFLKHRYWGMSSLSRKRYDSGNCMRILDSKLAEDIDVMANAPRLEEFVEEEERERFQEVCSLLKEAGVPFCVDNRLVRGLDYYTSTAFEFDGTEGKAVCAGGRYLDVCGASGVGFAVGLDRVEKVKCDGIGSYENGLDGGVVVIGLSKSAERSGCEVGRVAREVTKAFRERGVKCVSRLEGGRLSKVVGRAVRCGAKSVVVIGERDLTKGTAQVKYVSGEGVDEPREVAFSDVVKQVSERIQNECGVEDNG 432

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BLAST of Gcaud1720.t1 vs. uniprot
Match: A0A2E7TCV2_9GAMM (Histidine--tRNA ligase n=1 Tax=Acidiferrobacteraceae bacterium TaxID=2024893 RepID=A0A2E7TCV2_9GAMM)

HSP 1 Score: 241 bits (616), Expect = 9.730e-72
Identity = 156/420 (37.14%), Postives = 233/420 (55.48%), Query Frame = 0

Query:    7 VRGCRDILGRTASHRRHLVNSFAALCSVYNFHEIETPILERANLFSQSLGTGSEVISSEMYHIAETNP-ALALRPEGTAGVARALKDVGLLKCAPVYGTRVWYAGPMFRHERPQKGRYRQFWQMGVEAVGDDSVSTDLDTIGLA-AQYLSSIQCNTKLRLNTLGNKDTRKAYNDALKQFLKSRYWALSSLSRGRYDSGNCMRILDSKLPEDSDVMSTAPQLRDFVDEVEKERFKEVCSLLEEARIPFLIDDRLVRGLEYYTSTAFEFLGPGG---KAVCGGGRYTNVCGASG------IGFAIGLDRIES--EQCEGIASYDRNLENGVVVIGLSRTAERSDCEIGRTARRVVKEFRDRGIKCVGRLEGGRLSKMVGRAARSGAMAVVVLGEQDLDQATARVKFVSADCEQD--PQQKSL 411
            VRG  DIL   +   R++  +   + ++Y + EI TPI+E+  LFS+S+G  ++++  EMY   + N  +L LRPEGTA   RA    GLL  +     R WY GPMFRHERPQKGRYRQF Q GVEA+G      D + I L  A + +      +L +NTLG+ ++R+ Y DALK FL   Y  L   S  R D  N +RILDSK P    ++S AP + D++   +K  F  +C  L+  RI + I++RLVRGL+YYT   FE++ PG     +VCGGGRY N+    G       GFA GL+R+ +  E+ +     D  ++  +V++G S T          T   + ++ R +G++ +    GG + K + RA +SGA   V++G+++L+     +K +    EQ   P +K++
Sbjct:    9 VRGMNDILPTASETWRYVEQTIHEVVALYGYGEIRTPIVEKTELFSRSIGEQTDIVEKEMYTFVDRNQDSLTLRPEGTASCIRAGISHGLLYNST---QRWWYLGPMFRHERPQKGRYRQFHQFGVEAIGWPGPDIDSEVISLGHALWRALGLVGLRLEINTLGSLESRRQYTDALKIFLSDNYSDLDEASTFRLDQ-NPLRILDSKDPNTKALLSNAPVMGDYLTAEDKAHFDLLCRQLDILRIDYHINNRLVRGLDYYTGAVFEWIVPGEGSQNSVCGGGRYDNLVQQLGGSSTPAAGFACGLERLINLVEEQQNRRQSDAVVDIWMVLLGESATL---------TGHALAEDLRRKGMRVICNCGGGTIGKQLRRADQSGAHYAVIIGDKELESNAITIKGLRIAEEQSGIPLEKAV 415

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BLAST of Gcaud1720.t1 vs. uniprot
Match: A0A3M0YLR4_9GAMM (Histidine--tRNA ligase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0YLR4_9GAMM)

HSP 1 Score: 238 bits (607), Expect = 1.890e-70
Identity = 159/412 (38.59%), Postives = 224/412 (54.37%), Query Frame = 0

Query:    7 VRGCRDILGRTASHRRHLVNSFAALCSVYNFHEIETPILERANLFSQSLGTGSEVISSEMYHIAETNP-ALALRPEGTAGVARALKDVGLLKCAPVYGTRVWYAGPMFRHERPQKGRYRQFWQMGVEAVGDDSVSTDLDTIGLAAQYLSSIQCN-TKLRLNTLGNKDTRKAYNDALKQFLKSRYWALSSLSRGRYDSGNCMRILDSKLPEDSDVMSTAPQLRDFVDEVEKERFKEVCSLLEEARIPFLIDDRLVRGLEYYTSTAFEF----LGPGGKAVCGGGRYTNVCGASG------IGFAIGLDRIESEQCE-GIASYDRNLENGVVVIGLSRTAERSDCEIGRTARRVVKEFRDRGIKCVGRLEGGRLSKMVGRAARSGAMAVVVLGEQDLDQATARVKFVSADCEQD 405
            VRG  DIL       +    +   L S Y + EI  P++ER  LF +S+G  ++++  EMY   + N  +LALRPEGTAG  RA+   GLL+  P+   R+WY GPMFRHERPQKGRYRQF QMGVEA G +    D + I L  +    +     +L +N+LG+ + R  Y + L  + ++   AL   SR R  + N +RILDSK P+  D+++ AP+L D +D   K  F+E+C +LE AR+PF ++ RLVRGL+YYT T FE+    LG  G  V  GGRY  +    G      +GFAIG++R+ +   E G A         +V +GL+R A      +  T R  +   R      V    GG L   + +A RSGA   ++LGE++L      VK +  D  Q+
Sbjct:    8 VRGMNDILPEETPFWQTAEEAIRDLFSAYGYQEIRFPVVERTELFVRSIGAHTDIVEKEMYTFLDRNKESLALRPEGTAGCVRAVLQHGLLRRTPL--LRLWYGGPMFRHERPQKGRYRQFHQMGVEAFGMEGPDIDAEQILLNHRLFRRLGLEGIRLEINSLGSPEARARYREKLVAYFEAHREALDEDSRRRLHT-NPLRILDSKNPDMQDIIARAPKLLDELDAPSKAHFQELCGILEAARVPFTVNPRLVRGLDYYTKTVFEWITESLGAQGT-VSAGGRYDGLVEQFGGPPTPAVGFAIGMERLVALLKESGFAPLHHLPHAYLVHMGLAREA----LILAETLRDALPRLR-----IVVHCGGGSLKSQLKKADRSGAQVALLLGEEELKSGKVVVKPLRQDRPQE 406

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BLAST of Gcaud1720.t1 vs. uniprot
Match: A0A5P9NJE3_9GAMM (Histidine--tRNA ligase n=1 Tax=Halioglobus maricola TaxID=2601894 RepID=A0A5P9NJE3_9GAMM)

HSP 1 Score: 235 bits (600), Expect = 2.230e-69
Identity = 159/432 (36.81%), Postives = 231/432 (53.47%), Query Frame = 0

Query:    7 VRGCRDILGRTASHRRHLVNSFAALCSVYNFHEIETPILERANLFSQSLGTGSEVISSEMYHIAE-TNPALALRPEGTAGVARALKDVGLLKCAPVYGTRVWYAGPMFRHERPQKGRYRQFWQMGVEAVGDDSVSTDLDTIGLAAQYLSSIQC--NTKLRLNTLGNKDTRKAYNDALKQFLKSRYWALSSLSRGRYDSGNCMRILDSKLPEDSDVMSTAPQLRDFVDEVEKERFKEVCSLLEEARIPFLIDDRLVRGLEYYTSTAFEF----LGPGGKAVCGGGRYTNVC------GASGIGFAIGLDRIES--EQCEGIASYDRNLENGVVVIGLSRTAERSDCEIGRTARRVVKEFRDRG--IKCVGRLEGGRLSKMVGRAARSGAMAVVVLGEQDLDQATARVKFVSA-DCEQDPQQKSLVDVVDVVCR 420
            VRG  DIL     + +++      L S Y + EI  PI+ER +LF + +G  ++++  EMY   + +  +L LRPEGTAG  RA    GLL  A     R+WY GPMFR+ERPQKGR RQF Q+G EA G  S   D + I L A+    +    + +L+LN++G+ D R+AY DAL  +L+ R   L   S+ R DS N +RILDSK P+   ++  AP L DF+DE  +  F  +C LL+ A +P+ ++ RLVRGL+YY  T FE+    LG  G  VCGGGRY  +          G+GFA+GL+R+    E C+ +     N +  + V+     A+R        A    +  RD    ++ V    GG     + +A +SGA   ++ GE ++   T  +K + A D EQ  QQ   +D ++   R
Sbjct:    7 VRGMNDILPDETPYWQYIETVIRQLMSGYGYSEIRMPIVERTDLFRRGVGEVTDIVEKEMYTFEDRSEDSLTLRPEGTAGCVRAAIQHGLLNMA----QRLWYTGPMFRYERPQKGRQRQFHQVGAEAFGIASPDMDAEMILLTARLWRDLGVAEHVELQLNSIGSADARQAYKDALVVYLRERAEQLDEDSQRRLDS-NPLRILDSKNPDTQALLDGAPALGDFLDEESQADFARLCELLDAAGVPYTVNQRLVRGLDYYNKTVFEWVTDQLGAQGT-VCGGGRYDGLVEQLGGKAVPGVGFAMGLERLVLLLEACDTLPG--ANAQADIYVVSFGDDAQRQ-------AVAATERLRDSASALRIVQHTGGGSFKSQMKKADKSGARVALIWGEDEVAAGTVSLKALRAEDKEQITQQAVPLDELEQTLR 423

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BLAST of Gcaud1720.t1 vs. uniprot
Match: A0A2T0VI02_9GAMM (Histidine--tRNA ligase n=6 Tax=Halomonas ventosae TaxID=229007 RepID=A0A2T0VI02_9GAMM)

HSP 1 Score: 235 bits (599), Expect = 4.550e-69
Identity = 153/413 (37.05%), Postives = 231/413 (55.93%), Query Frame = 0

Query:    7 VRGCRDILGRTASHRRHLVNSFAALCSVYNFHEIETPILERANLFSQSLGTGSEVISSEMYHIAETN-PALALRPEGTAGVARALKDVGLLKCAPVYGTRVWYAGPMFRHERPQKGRYRQFWQMGVEAVGDDSVSTDLDTIGLAAQYLSSIQC--NTKLRLNTLGNKDTRKAYNDALKQFLKSRYWALSSLSRGRYDSGNCMRILDSKLPEDSDVMSTAPQLRDFVDEVEKERFKEVCSLLEEARIPFLIDDRLVRGLEYYTSTAFEF----LGPGGKAVCGGGRYTNVCGASG------IGFAIGLDRIES--EQCEGIASYDRNLENGVVVIGLSRTAERSDCEIGRTARRVVKEFRDRGIKCVGRLEGGRLSKMVGRAARSGAMAVVVLGEQDLDQATARVKFVSADCEQ 404
            +RG  D+L   ++  +++     AL   Y + EI TPI+E+  LF +S+G  ++++  EMY   + N  +L LRPEGTA   RA  + GLL        R+WY GPMFRHERPQKGRYRQF Q+GVEA G +    D +TI L+A+   ++    +  L LN+LG+ + R AY D L  + +  +  L   SR R  S N MRILD+K P+ ++++  AP+L D +D+  +  F+E+C+LL+ A I ++I+ RLVRGL+YY  T FE+    LG  G  VC GGRY  +    G      +GFA+GL+R+    +  E +    R+ E  V ++ +   A  +   +G   R  + E R + + C     GG     + +A RSGA   ++LGE +L +    +KF+  + EQ
Sbjct:   19 IRGMNDLLPEQSALWQYVEGQVQALMRRYGYAEIRTPIVEQTALFKRSIGEVTDIVEKEMYTFDDRNGDSLTLRPEGTASCVRAAMEHGLLHNQT---QRLWYQGPMFRHERPQKGRYRQFHQVGVEAFGLEGPDIDAETILLSARLWKALGLYEHVTLELNSLGSSEARAAYRDTLVAYFEQHHALLDEDSRRRLTS-NPMRILDAKNPDMAEMLDAAPRLMDHLDDASRAHFEELCALLDAAGIDYVINPRLVRGLDYYGRTVFEWTTTALGSQGT-VCAGGRYDGLVEQLGGKPTPAVGFAMGLERLVLLLDTLELLPDTARD-ELDVYLLPMGEAATSAALLLGERLREALPEMRLQ-LHC----GGGSFKSRIKKADRSGARLALLLGEDELAEGNVTLKFLREEREQ 420

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BLAST of Gcaud1720.t1 vs. uniprot
Match: A0A1H7R0J9_9GAMM (Histidine--tRNA ligase n=4 Tax=Halomonas TaxID=2745 RepID=A0A1H7R0J9_9GAMM)

HSP 1 Score: 234 bits (597), Expect = 9.000e-69
Identity = 156/433 (36.03%), Postives = 240/433 (55.43%), Query Frame = 0

Query:    7 VRGCRDILGRTASHRRHLVNSFAALCSVYNFHEIETPILERANLFSQSLGTGSEVISSEMYHIAETN-PALALRPEGTAGVARALKDVGLLKCAPVYGTRVWYAGPMFRHERPQKGRYRQFWQMGVEAVGDDSVSTDLDTIGLAAQY--LSSIQCNTKLRLNTLGNKDTRKAYNDALKQFLKSRYWALSSLSRGRYDSGNCMRILDSKLPEDSDVMSTAPQLRDFVDEVEKERFKEVCSLLEEARIPFLIDDRLVRGLEYYTSTAFEF----LGPGGKAVCGGGRYTNVCGASG------IGFAIGLDRIESE-QCEGIASYDRNLENGVVVIGLSRTAERSDCEIGRTARRVVKEFRDRGIKCVGRLEGGRLSKMVGRAARSGAMAVVVLGEQDLDQATARVKFVSADCEQDPQQKSLVDVVDVVCRRARGE 425
            +RG  D+L   ++  +++     AL   Y + EI TPI+E+  LF +S+G  ++++  EMY   + N  +L LRPEGTA   RA  + GLL        R+WY GPMFRHERPQKGRYRQF Q+GVEA G +    D++TI L+A+   +  +  +  L LN+LG+ + R AY D L  + +  +  L   SR R  S N MRILDSK P+ ++++  APQL D +D+  +  F+++C+LL+ A I ++I+ RLVRGL+YY  T FE+    LG  G  VC GGRY  +    G      +GFA+G++R+       G+     + E  V ++ +   A  +   +G   R  + E R + + C      G     + +A RSGA   ++LGE +L + +  +KF+  + EQ  ++ SL ++ D +     GE
Sbjct:   19 IRGMNDLLPEQSALWQYVEGQVHALMQRYGYAEIRTPIVEQTALFKRSIGEVTDIVEKEMYTFDDRNGDSLTLRPEGTASCVRAAMEHGLLHNQT---QRLWYQGPMFRHERPQKGRYRQFHQVGVEAFGLEGPDIDVETILLSARLWKVLGLYEHVTLELNSLGSAEARAAYRDTLVAYFEQHHALLDEDSRRRLTS-NPMRILDSKNPDMAEMLDAAPQLMDHLDDESRAHFEQLCALLDAAGIDYVINPRLVRGLDYYGRTVFEWTTTALGSQGT-VCAGGRYDGLVEQLGGKSTPAVGFAMGIERLVLLLDTLGLVPDTVHDELDVYLLPMGEAATAAALLLGERLRESLPELRLQ-MHC----GSGSFKSRMKKADRSGARLALLLGEDELAEGSVALKFLREEREQ--RRLSLAELTDTLTSLLEGE 439

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BLAST of Gcaud1720.t1 vs. uniprot
Match: A0A2E3XD15_9PROT (Histidine--tRNA ligase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3XD15_9PROT)

HSP 1 Score: 233 bits (593), Expect = 1.670e-68
Identity = 146/403 (36.23%), Postives = 227/403 (56.33%), Query Frame = 0

Query:    7 VRGCRDILGRTASHRRHLVNSFAALCSVYNFHEIETPILERANLFSQSLGTGSEVISSEMYHIAETN-PALALRPEGTAGVARALKDVGLLKCAPVYGTRVWYAGPMFRHERPQKGRYRQFWQMGVEAVGDDSVSTDLDTIGLAAQYLSSIQCN--TKLRLNTLGNKDTRKAYNDALKQFLKSRYWALSSLSRGRYDSGNCMRILDSKLPEDSDVMSTAPQLRDFVDEVEKERFKEVCSLLEEARIPFLIDDRLVRGLEYYTSTAFEF----LGPGGKAVCGGGRYTNVC------GASGIGFAIGLDRIESEQCEGIASYDRNLENGVVVIGLSRTAERSDCEIGRTARRVVKEFRDRGIKCVGRLEGGRLSKMVGRAARSGAMAVVVLGEQDLDQATARVK 396
            VRG +D+LG  +  +R+++N+   +   Y +  IETP+ E  ++F ++LG  S++++ EMY   +    +L LRPEGTAG+ARA+   GLL   P+   + +Y+GPMFRHERPQKGR RQF Q+GVE +G      D++ I LA  YL  +     T L +NTLG+  +R +Y + L  +L+    +LS  S+ R D  N +RILDSK  ED  ++  AP   D+++   +  F  V + LE+  IP+ ++ RLVRGL+YY  TAFEF    +G  G  V  GGRY N+          GIG+A G++R+       +A ++ +    ++VIG+    E       R A ++ K+ R    K      GG L + + RA + GA A V +G+++L + +  ++
Sbjct:    7 VRGTKDLLGSESLVQRYVINTAQKISERYGYEPIETPVFEFTDVFKRTLGNTSDIVTKEMYTFEDKGGDSLTLRPEGTAGIARAMLSXGLLNQTPL---KWYYSGPMFRHERPQKGRLRQFHQVGVELIGIAEPVGDIEVIDLARAYLDELGVLPFTNLEINTLGDSQSRSSYREVLVSYLEDYRSSLSMESQSRLDL-NPLRILDSKNEEDKXIICNAPPYTDYLNYESESFFNSVIAGLEDLDIPYKVNPRLVRGLDYYCHTAFEFTTTRIGSQGT-VLAGGRYDNLITMMGGNXTPGIGWAAGVERLAM-----LADFELDKRRAIIVIGIGAAGE-------RLAVKLAKDLRQSEFKIELNYRGG-LKRGLRRANKIGAAAAVFIGDEELSRQSVTLR 391

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BLAST of Gcaud1720.t1 vs. uniprot
Match: A0A2N5YFU3_9GAMM (Histidine--tRNA ligase n=3 Tax=Halioglobus TaxID=1217416 RepID=A0A2N5YFU3_9GAMM)

HSP 1 Score: 232 bits (591), Expect = 4.800e-68
Identity = 149/420 (35.48%), Postives = 229/420 (54.52%), Query Frame = 0

Query:    7 VRGCRDILGRTASHRRHLVNSFAALCSVYNFHEIETPILERANLFSQSLGTGSEVISSEMYHIAE-TNPALALRPEGTAGVARALKDVGLLKCAPVYGTRVWYAGPMFRHERPQKGRYRQFWQMGVEAVGDDSVSTDLDTIGLAAQYLSSIQC--NTKLRLNTLGNKDTRKAYNDALKQFLKSRYWALSSLSRGRYDSGNCMRILDSKLPEDSDVMSTAPQLRDFVDEVEKERFKEVCSLLEEARIPFLIDDRLVRGLEYYTSTAFEF----LGPGGKAVCGGGRYTNVCG------ASGIGFAIGLDRIES--EQCEGIASYDRNLENGVVVIGLSRTAERSDCEIGRTARRVVKEFRDRGIKCVGRLEGGRLSKMVGRAARSGAMAVVVLGEQDLDQATARVKFVSADCEQDPQQKSL 411
            +RG  DIL   + H +H+ +    L + Y + EI  P++E+ +LF + +G  ++++  EMY   + ++ +L LRPEGTAG  RA    GLL  A     R+WYAGPMFR+ERPQKGR RQF Q G EA G  S   D + I L A+    +    + +L+LN++G  + R+AY DAL  +L+ R+  L   S+ R DS N +RILDSK P+   ++  AP+L +++DE  +  F  +C LL+ A + + ++ RLVRGL+YY  T FE+    LG  G  VCGGGRY  +          G+GFA+G++R+    E C  + +     +  V V+     A+R       T R  V +     +  V    GG     + +A +SGA   ++ GE ++   T  +K + AD ++   Q++L
Sbjct:    7 IRGMNDILPDESPHWQHVESVVRRLMTGYGYSEIRMPVVEQTDLFKRGVGEVTDIVEKEMYTFLDRSDDSLTLRPEGTAGCVRAAIQHGLLNMA----QRLWYAGPMFRYERPQKGRQRQFHQFGAEAFGIASPDMDAEMILLTARLWRQLGVAEHVQLQLNSIGGAEARQAYKDALVVYLRERFDELDEDSQRRLDS-NPLRILDSKNPQTQALLDDAPELANYLDEESRADFARLCELLDAAGVAYAVNQRLVRGLDYYNKTVFEWVTDQLGSQGT-VCGGGRYDGLVEQLGGKPVPGVGFAMGVERLVLLLEACGTLPAAPAQAD--VYVVSFGDDAQRQAIATTETLRDAVPQ-----LNIVQHNGGGSFKSQMKKADKSGARLALIWGEDEVAAGTVSLKALRADDKERIPQQAL 413

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BLAST of Gcaud1720.t1 vs. uniprot
Match: A0A1J0VEI7_9GAMM (Histidine--tRNA ligase n=7 Tax=Halomonas TaxID=2745 RepID=A0A1J0VEI7_9GAMM)

HSP 1 Score: 231 bits (590), Expect = 8.570e-68
Identity = 156/434 (35.94%), Postives = 235/434 (54.15%), Query Frame = 0

Query:    7 VRGCRDILGRTASHRRHLVNSFAALCSVYNFHEIETPILERANLFSQSLGTGSEVISSEMYHIAETN-PALALRPEGTAGVARALKDVGLLKCAPVYGTRVWYAGPMFRHERPQKGRYRQFWQMGVEAVGDDSVSTDLDTIGLAAQYLSSIQC--NTKLRLNTLGNKDTRKAYNDALKQFLKSRYWALSSLSRGRYDSGNCMRILDSKLPEDSDVMSTAPQLRDFVDEVEKERFKEVCSLLEEARIPFLIDDRLVRGLEYYTSTAFEF----LGPGGKAVCGGGRYTNVCGASG------IGFAIGLDRIES--EQCEGIASYDRNLENGVVVIGLSRTAERSDCEIGRTARRVVKEFRDRGIKCVGRLEGGRLSKMVGRAARSGAMAVVVLGEQDLDQATARVKFVSADCEQDPQQKSLVDVVDVVCRRARGE 425
            +RG  D+L   +   ++      +L   Y + EI TPI+E+  LF +S+G  ++++  EMY   + N  +L LRPEGTA   RA  + GLL        R+WY GPMFRHERPQKGRYRQF Q+GVE  G +    D +TI L+A+    +    +  L LN+LG+ + R AY D L  + +  +  L   SR R  S N MRILDSK PE ++++  AP+L D +D+  +E F+ +C+LL+ A I ++I+ RLVRGL+YY  T FE+    LG  G  VC GGRY  +    G      +GFA+G++R+    E  E + +  R   + V ++ +   A      +G   R  + E R + + C     GG     + +A RSGA   ++LGE +L + +  +KF+  + EQ  Q+    ++ D +     GE
Sbjct:   14 IRGMNDLLPEQSPLWQYFEGQVRSLMGRYGYDEIRTPIVEQTALFKRSIGEVTDIVEKEMYTFEDRNGDSLTLRPEGTASCVRAAMEHGLLHNQT---QRLWYQGPMFRHERPQKGRYRQFHQIGVETFGLEGPDIDAETILLSARLWKQLGLAEHVTLELNSLGSSEARAAYRDTLVAYFEQHHALLDEDSRRRLTS-NPMRILDSKNPEMAEMLDGAPKLMDHLDDASREHFERLCALLDTAGIDYVINPRLVRGLDYYGRTVFEWTTTALGSQGT-VCAGGRYDGLVEQLGGKPTPAVGFAMGIERLILLLETLELVPAEARGALD-VYLLPMDDAATGPALLLGERLREALPELRAQ-LHC----GGGSFKSRMKKADRSGARLALLLGEDELAEGSVTLKFLREEREQ--QRLPQSELADTLTSLLNGE 434

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BLAST of Gcaud1720.t1 vs. uniprot
Match: A0A1M4TAB0_9GAMM (Histidine--tRNA ligase n=2 Tax=Halomonas ilicicola TaxID=480814 RepID=A0A1M4TAB0_9GAMM)

HSP 1 Score: 231 bits (589), Expect = 9.000e-68
Identity = 149/414 (35.99%), Postives = 233/414 (56.28%), Query Frame = 0

Query:    7 VRGCRDILGRTASHRRHLVNSFAALCSVYNFHEIETPILERANLFSQSLGTGSEVISSEMYHIAETN-PALALRPEGTAGVARALKDVGLLKCAPVYGTRVWYAGPMFRHERPQKGRYRQFWQMGVEAVGDDSVSTDLDTIGLAAQYLSSIQC--NTKLRLNTLGNKDTRKAYNDALKQFLKSRYWALSSLSRGRYDSGNCMRILDSKLPEDSDVMSTAPQLRDFVDEVEKERFKEVCSLLEEARIPFLIDDRLVRGLEYYTSTAFEF----LGPGGKAVCGGGRYTNVCGASG------IGFAIGLDRIES--EQCEGIASYDRNLENGVVVIGLSRTAERSDCEIGRTARRVVKEFRDRGIKCVGRLEGGRLSKMVGRAARSGAMAVVVLGEQDLDQATARVKFVSADCEQD 405
            +RG  D+L   +   ++      +L   Y + EI TPILE+  LF++S+G  ++++  EMY  A+ N  +L LRPEGTA   RA  + GLL        R+WY GPMFRHERPQKGRYRQF Q+G+EA G +    D + I L+A+   ++    +  L LN+LG+ + R+AY + L  + +S +  L   SR R  S N +RILDSK P+ +++++ AP+L + +DE  +  F  +  LL+ A IP+ ++ RLVRGL+YY+ T FE+    LG  G  VC GGRY  +    G      +GFA+G++R+    E  + + +  R+  +  + + +   AE+    +G   R V+     + + C     GG     + +A RSGA   ++LGE +LD+ T  +KF+  + EQ+
Sbjct:    8 IRGMNDLLPEQSPLWQYFEQQIQSLMRRYGYLEIRTPILEQTALFARSIGEVTDIVEKEMYTFADRNGDSLTLRPEGTASCVRAAMENGLLHNQT---QRLWYQGPMFRHERPQKGRYRQFHQVGIEAFGMEGPDIDAEVILLSARLWKALGLFDHVTLELNSLGSLEARRAYRETLVAYFESHHEVLDEDSRRRLSS-NPLRILDSKNPDMAEMLAGAPRLLEHLDEASRVHFARLTELLDAAGIPYRLNPRLVRGLDYYSRTVFEWTTTALGSQGT-VCAGGRYDGLVEQLGGKPTPAVGFAMGIERLILLLETLDLVPAETRHGPDAYL-LAMGERAEQEALLLGERLRDVLPRLTLQ-VHC----GGGGFKSQIKKADRSGARLALILGEDELDRGTLGLKFLREEREQE 410

The following BLAST results are available for this feature:

BLAST of Gcaud1720.t1 vs. uniprot

BLAST of Gcaud1720.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2V3J200_9FLOR	1.040e-217	68.98	Histidine--tRNA ligase n=1 Tax=Gracilariopsis chor...	[more]
A0A2E7TCV2_9GAMM	9.730e-72	37.14	Histidine--tRNA ligase n=1 Tax=Acidiferrobacterace...	[more]
A0A3M0YLR4_9GAMM	1.890e-70	38.59	Histidine--tRNA ligase n=1 Tax=Gammaproteobacteria...	[more]
A0A5P9NJE3_9GAMM	2.230e-69	36.81	Histidine--tRNA ligase n=1 Tax=Halioglobus maricol...	[more]
A0A2T0VI02_9GAMM	4.550e-69	37.05	Histidine--tRNA ligase n=6 Tax=Halomonas ventosae ...	[more]
A0A1H7R0J9_9GAMM	9.000e-69	36.03	Histidine--tRNA ligase n=4 Tax=Halomonas TaxID=274...	[more]
A0A2E3XD15_9PROT	1.670e-68	36.23	Histidine--tRNA ligase n=1 Tax=Rhodospirillaceae b...	[more]
A0A2N5YFU3_9GAMM	4.800e-68	35.48	Histidine--tRNA ligase n=3 Tax=Halioglobus TaxID=1...	[more]
A0A1J0VEI7_9GAMM	8.570e-68	35.94	Histidine--tRNA ligase n=7 Tax=Halomonas TaxID=274...	[more]
A0A1M4TAB0_9GAMM	9.000e-68	35.99	Histidine--tRNA ligase n=2 Tax=Halomonas ilicicola...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015807	Histidine-tRNA ligase	TIGRFAM	TIGR00442	TIGR00442	coord: 6..401 e-value: 1.1E-94 score: 315.7
IPR015807	Histidine-tRNA ligase	HAMAP	MF_00127	His_tRNA_synth	coord: 2..420 score: 23.186136
IPR045864	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	GENE3D	3.30.930.10	Bira Bifunctional Protein; Domain 2	coord: 4..309 e-value: 4.3E-77 score: 261.3
IPR045864	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	SUPERFAMILY	55681	Class II aaRS and biotin synthetases	coord: 6..305
IPR036621	Anticodon-binding domain superfamily	GENE3D	3.40.50.800		coord: 322..423 e-value: 4.2E-8 score: 34.8
IPR004154	Anticodon-binding	PFAM	PF03129	HGTP_anticodon	coord: 322..401 e-value: 1.4E-5 score: 25.1
IPR041715	Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain	PFAM	PF13393	tRNA-synt_His	coord: 9..303 e-value: 1.3E-33 score: 116.6
IPR041715	Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain	CDD	cd00773	HisRS-like_core	coord: 21..303 e-value: 2.83856E-59 score: 192.818
IPR004516	Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit	PIRSF	PIRSF001549	His-tRNA_synth	coord: 1..419 e-value: 6.7E-79 score: 263.5
IPR004516	Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit	PANTHER	PTHR43707	HISTIDYL-TRNA SYNTHETASE	coord: 1..400
None	No IPR available	PANTHER	PTHR43707:SF4	HISTIDINE--TRNA LIGASE	coord: 1..400
None	No IPR available	SUPERFAMILY	52954	Class II aaRS ABD-related	coord: 338..412
IPR006195	Aminoacyl-tRNA synthetase, class II	PROSITE	PS50862	AA_TRNA_LIGASE_II	coord: 37..303 score: 11.276232

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
NODE_849_length_17037_cov_4.361560	contig	NODE_849_length_17037_cov_4.361560:8265..9847 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria caudata M_176_S67 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gcaud1720.t1	Gcaud1720.t1	Gracilaria caudata M_176_S67 male	mRNA	NODE_849_length_17037_cov_4.361560 8265..9847 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gcaud1720.t1 ID=Gcaud1720.t1|Name=Gcaud1720.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=446bp
MVASSLVRGCRDILGRTASHRRHLVNSFAALCSVYNFHEIETPILERANL
FSQSLGTGSEVISSEMYHIAETNPALALRPEGTAGVARALKDVGLLKCAP
VYGTRVWYAGPMFRHERPQKGRYRQFWQMGVEAVGDDSVSTDLDTIGLAA
QYLSSIQCNTKLRLNTLGNKDTRKAYNDALKQFLKSRYWALSSLSRGRYD
SGNCMRILDSKLPEDSDVMSTAPQLRDFVDEVEKERFKEVCSLLEEARIP
FLIDDRLVRGLEYYTSTAFEFLGPGGKAVCGGGRYTNVCGASGIGFAIGL
DRIESEQCEGIASYDRNLENGVVVIGLSRTAERSDCEIGRTARRVVKEFR
DRGIKCVGRLEGGRLSKMVGRAARSGAMAVVVLGEQDLDQATARVKFVSA
DCEQDPQQKSLVDVVDVVCRRARGEGETADDGGAVPLVQNISRVE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015807	His-tRNA-ligase
IPR045864	aa-tRNA-synth_II/BPL/LPL
IPR036621	Anticodon-bd_dom_sf
IPR004154	Anticodon-bd
IPR041715	HisRS-like_core
IPR004516	HisRS/HisZ
IPR006195	aa-tRNA-synth_II