Gcaud1707.t3 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1707.t3
Unique NameGcaud1707.t3
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length480
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1707.t3 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 390..426
e-value: 0.082
score: 22.0
coord: 295..331
e-value: 120.0
score: 4.1
coord: 352..388
e-value: 0.0013
score: 28.0
coord: 428..464
e-value: 0.47
score: 19.5
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 391..425
e-value: 0.0077
score: 16.9
coord: 353..385
e-value: 4.1E-5
score: 24.1
coord: 301..327
e-value: 0.6
score: 10.9
coord: 428..458
e-value: 1.6
score: 9.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 274..480
e-value: 1.1E-30
score: 108.6
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 315..475
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 315..475
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 300..475

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_3969_length_2728_cov_4.393629contigNODE_3969_length_2728_cov_4.393629:578..2017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1707.t3Gcaud1707.t3Gracilaria caudata M_176_S67 malemRNANODE_3969_length_2728_cov_4.393629 578..2017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1707.t3 ID=Gcaud1707.t3|Name=Gcaud1707.t3|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=480bp
MFEVENSGLLKQQPRVRNQTSNLHEESGMAQLVSIMSGTKQHVVRYDEVQ
ARVLKHAMLLIRGALPSYALRLQSIIHDGCGDSLPDSQEDLLALADRLSK
EAECDVERVALLYESAALEYGRVDEGREPLSKCLNFLFAHESAAKTPKRI
VNVLLRYMSTILPEGEKSTSNLSSERRKTLLEVAYPACEQVVRQYGLCLR
QEVDEKLFRCLLLLQLCDRGTKNTENIRSLMEVILVSSQSSTYLLPTYAD
SFGYPAERSSEPGDAVMRAPLPVKEDFRVKYLILEMAVQYLPRDRDVLNS
LAKLLSKGAFGVRRDAVRAKALYERALHEDERALMSGRIIVSDRTTIEGG
HIDAMYNLANLLAAGAPGVPQDAPSAVKLYERAIKVGGHPGAMSKLASLL
TNGAPGVAVNASRAAELYRRAIEEGGRADAMYYLANLLTVGAAGVNVNFE
RAAQYLELSVLQYGNTDAMVALAWLMSSRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf