Gcaud1698.t1 (polypeptide) Gracilaria caudata M_176_S67 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGcaud1698.t1
Unique NameGcaud1698.t1
Typepolypeptide
OrganismGracilaria caudata M_176_S67 male (Gracilaria caudata M_176_S67 male)
Sequence length507
Homology
The following BLAST results are available for this feature:
BLAST of Gcaud1698.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 297..338
NoneNo IPR availableCOILSCoilCoilcoord: 192..275
NoneNo IPR availableCOILSCoilCoilcoord: 66..86
NoneNo IPR availableCOILSCoilCoilcoord: 105..177
NoneNo IPR availableCOILSCoilCoilcoord: 378..447
NoneNo IPR availableGENE3D1.10.287.1490coord: 287..451
e-value: 2.0E-5
score: 25.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..447
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 331..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 374..506

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NODE_981_length_15546_cov_4.499191contigNODE_981_length_15546_cov_4.499191:7894..9414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria caudata M_176_S67 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gcaud1698.t1Gcaud1698.t1Gracilaria caudata M_176_S67 malemRNANODE_981_length_15546_cov_4.499191 7894..9414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gcaud1698.t1 ID=Gcaud1698.t1|Name=Gcaud1698.t1|organism=Gracilaria caudata M_176_S67 male|type=polypeptide|length=507bp
MTDPPRRDMFSFLNLNPLRLLRRDKLRPTTNPPESSPQPSSSEQIDQLNT
KLRDSQTAHNAVAADFDALKQQHAQTATEFDALREKNAVTVEQFDALQDV
HTAVLAELESLKSAHAEKLSQLESLTATNAQTVANNAALNEQLSSLSKQH
EQQSAQMSQLQDENVRLSELLSQVRAHHGALQKTLAAREGALADQTAESE
RLSAALKEKEQQCEDVKADLAKESELLAAANTKLSEANAANEALTTQLQE
QTARADALQKELTDEKEALAESDKQLTTEREAHVVTKGELEGETKKLQET
QATLTEKEGMLKTLGEEKEALNTKLTEVQSELDTSRGESETLRGEVGDRE
TKLAAKTAEGEQAMKEAGERELALNGEKDTLQKSLDELKATEGELREQLE
KVGMEKSEVEKERDEGLKERDELKEELRQARTELEDWMREIKMAEQGADG
DGDGGGAEVADGQADGGVDMNGVSGEGVEQGLAPPPAAEEGVEQGLAPPP
AAEEGA*
back to top